Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G0472 Fragaria x ananassa HOM05D005675 ORTHO05D006884 0.0e+00 1146.3 588 100.0
FAN09G4269 Fragaria x ananassa HOM05D005675 ORTHO05D006884 5.1e-140 502.3 333 79.3
FAN14G0585 Fragaria x ananassa HOM05D005675 ORTHO05D006884 1.5e-139 500.7 336 78.6
FAN05G3686 Fragaria x ananassa HOM05D005675 ORTHO05D006884 4.0e-137 492.7 349 75.6
RcHm_v2.0_Chr2g0128761 Rosa chinensis HOM05D005675 ORTHO05D006884 3.2e-110 403.3 348 64.4
Prupe.4G276600 Prunus persica HOM05D005675 ORTHO05D006884 5.5e-94 349.4 328 59.5
FvH4_6g26940 Fragaria vesca HOM05D005675 ORTHO05D006884 2.2e-87 327.4 176 91.5
MD07G1305000 Malus domestica HOM05D005675 ORTHO05D006884 5.7e-83 312.8 280 61.4
CiPaw.16G104100 Carya illinoinensis HOM05D005675 ORTHO05D006884 1.3e-71 275.0 291 53.6
QL11p008661 Quercus lobata HOM05D005675 ORTHO05D006884 3.3e-70 270.4 282 53.9
Cfa020754 Carpinus fangiana HOM05D005675 ORTHO05D006884 1.0e-68 265.4 281 53.7
Ciclev10008766m.g Citrus clementina HOM05D005675 ORTHO05D006884 2.6e-67 260.8 275 52.0
Potri.006G078700 Populus trichocarpa HOM05D005675 ORTHO05D006884 5.8e-67 259.6 288 51.0
Prupe.3G126100 Prunus persica HOM05D005675 ORTHO05D006884 7.5e-67 259.2 275 54.9
Sabra06G0059600 Salix brachista HOM05D005675 ORTHO05D006884 1.6e-64 251.5 281 49.8
Lj1g0011117 Lotus japonicus HOM05D005675 ORTHO05D006884 4.6e-64 250.0 269 52.4
Dinv26452 Davidia involucrata HOM05D005675 ORTHO05D006884 1.0e-63 248.8 280 52.9
CANSAT80G1422 Cannabis sativa HOM05D005675 ORTHO05D006884 1.5e-62 245.0 299 48.8
TWI63G1173 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 1.9e-62 244.6 279 48.4
TAR626G0076 Trochodendron aralioides HOM05D005675 ORTHO05D006884 1.6e-61 241.5 274 50.7
CSS0039496 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 2.1e-61 241.1 288 50.3
Manes.01G177400 Manihot esculenta HOM05D005675 ORTHO05D006884 3.1e-60 237.3 296 47.0
Duzib168G1643 Durio zibethinus HOM05D005675 ORTHO05D006884 5.2e-60 236.5 270 51.5
Actinidia02470 Actinidia chinensis HOM05D005675 ORTHO05D006884 8.9e-60 235.7 289 48.4
PGR044G2364 Punica granatum HOM05D005675 ORTHO05D006884 3.4e-59 233.8 275 48.7
TWI34G2031 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 3.4e-59 233.8 277 48.0
Cpa.g.sc115.21 Carica papaya HOM05D005675 ORTHO05D006884 9.8e-59 232.3 278 50.7
GSVIVG01000235001 Vitis vinifera HOM05D005675 ORTHO05D006884 2.2e-58 231.1 287 45.6
COL.COLO4_23415 Corchorus olitorius HOM05D005675 ORTHO05D006884 3.7e-58 230.3 277 47.3
Rhsim01G0109900 Rhododendron simsii HOM05D005675 ORTHO05D006884 3.7e-58 230.3 289 46.4
PSO063G5127 Papaver somniferum HOM05D005675 ORTHO05D006884 4.9e-58 229.9 274 48.5
Thecc.09G196800 Theobroma cacao HOM05D005675 ORTHO05D006884 2.4e-57 227.6 264 50.0
Gohir.D08G027200 Gossypium hirsutum HOM05D005675 ORTHO05D006884 3.2e-57 227.3 272 51.8
TPR.G21343 Trifolium pratense HOM05D005675 ORTHO05D006884 5.4e-57 226.5 275 47.3
Dinv25398 Davidia involucrata HOM05D005675 ORTHO05D006884 7.1e-57 226.1 279 49.5
Gorai.004G024100 Gossypium raimondii HOM05D005675 ORTHO05D006884 9.2e-57 225.7 272 51.8
Gohir.A08G016800 Gossypium hirsutum HOM05D005675 ORTHO05D006884 2.1e-56 224.6 272 51.8
Ca_25634_v3 Cicer arietinum L. HOM05D005675 ORTHO05D001317 1.7e-55 221.5 279 46.2
PSO170G1351 Papaver somniferum HOM05D005675 ORTHO05D006884 2.3e-55 221.1 274 48.2
Eucgr.C02170 Eucalyptus grandis HOM05D005675 ORTHO05D006884 3.9e-55 220.3 274 47.8
Medtr6g093070 Medicago truncatula HOM05D005675 ORTHO05D006884 9.5e-54 215.7 258 46.9
Hma1.2p1_0661F.1_g198030 Hydrangea macrophylla HOM05D005675 ORTHO05D006884 1.2e-53 215.3 280 46.4
arahy.Tifrunner.gnm1.ann1.RL68NL Arachis hypogaea HOM05D005675 ORTHO05D006884 2.1e-53 214.5 288 46.2
DCAR_009047 Daucus carota HOM05D005675 ORTHO05D006884 6.8e-52 209.5 261 47.5
Lalb_Chr14g0362531 Lupinus albus HOM05D005675 ORTHO05D006884 6.8e-52 209.5 265 48.7
CAN.G1751.7 Capsicum annuum HOM05D005675 ORTHO05D006884 1.2e-51 208.8 288 40.6
PGSC0003DMG400006457 Solanum tuberosum HOM05D005675 ORTHO05D006884 2.0e-51 208.0 274 43.1
Solyc07g017290.4 Solanum lycopersicum HOM05D005675 ORTHO05D006884 4.4e-51 206.8 274 43.8
Sopen07g006010 Solanum pennellii HOM05D005675 ORTHO05D006884 1.7e-50 204.9 272 43.0
vmacro20762 Vaccinium macrocarpon HOM05D005675 ORTHO05D006884 1.7e-50 204.9 328 40.2
THA.LOC104815311 Tarenaya hassleriana HOM05D005675 ORTHO05D006884 3.7e-50 203.8 270 45.9
Glyma.01G001700 Glycine max HOM05D005675 ORTHO05D006884 1.4e-49 201.8 282 44.0
Solyc12g017470.2 Solanum lycopersicum HOM05D005675 ORTHO05D006884 1.4e-49 201.8 274 41.6
CAN.G1751.9 Capsicum annuum HOM05D005675 ORTHO05D006884 1.9e-49 201.4 288 38.5
Lsat_1_v5_gn_7_57460 Lactuca sativa HOM05D005675 ORTHO05D006884 2.1e-48 198.0 258 48.4
AT3G10572 Arabidopsis thaliana HOM05D005675 ORTHO05D006884 2.7e-48 197.6 260 46.9
BolC5t34404H Brassica oleracea HOM05D005675 ORTHO05D006884 3.5e-48 197.2 254 49.6
C05p57470 Brassica napus HOM05D005675 ORTHO05D006884 6.0e-48 196.4 254 48.8
Aa31LG3G3440 Aethionema arabicum HOM05D005675 ORTHO05D006884 1.0e-47 195.7 269 46.1
Nitab4.5_0014696g0010 Nicotiana tabacum HOM05D005675 ORTHO05D006884 1.0e-47 195.7 273 41.0
ClCG05G011260 Citrullus lanatus HOM05D005675 ORTHO05D006884 1.7e-47 194.9 287 44.3
SGA_v2.0_scaffold339G49254 Striga asiatica HOM05D005675 ORTHO05D006884 2.3e-47 194.5 278 41.4
Carub.0003s0981 Capsella rubella HOM05D005675 ORTHO05D006884 3.0e-47 194.1 259 47.5
A03p36640 Brassica napus HOM05D005675 ORTHO05D006884 5.1e-47 193.4 253 47.4
Phvul.004G178000 Phaseolus vulgaris HOM05D005675 ORTHO05D006884 5.1e-47 193.4 282 42.2
AL3G45830 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 8.6e-47 192.6 262 45.8
MBI13_g31573_MAGBIO Magnolia biondii HOM05D005675 ORTHO05D006884 1.1e-46 192.2 322 40.1
VMungo0464G1932 Vigna mungo HOM05D005675 ORTHO05D001317 1.5e-46 191.8 288 41.7
HanXRQChr03g0067281 Helianthus annuus HOM05D005675 ORTHO05D006884 1.9e-46 191.4 257 45.1
BraA05t22649Z Brassica rapa HOM05D005675 ORTHO05D006884 2.5e-46 191.0 252 46.8
ECA240G2624 Erigeron canadensis HOM05D005675 ORTHO05D006884 3.3e-46 190.7 249 46.2
Sp3g08870 Schrenkiella parvula HOM05D005675 ORTHO05D006884 3.3e-46 190.7 259 46.3
Aqoxy6G03025 Aquilegia oxysepala HOM05D005675 ORTHO05D006884 4.3e-46 190.3 264 40.2
MSTRG.26518 Avicennia marina HOM05D005675 ORTHO05D006884 4.3e-46 190.3 281 41.3
Cc00_g00090 Coffea canephora HOM05D005675 ORTHO05D006884 4.3e-46 190.3 272 43.0
Sed0020807 Sechium edule HOM05D005675 ORTHO05D006884 4.3e-46 190.3 278 44.6
Atru.chr2.1389 Acer truncatum HOM05D005675 ORTHO05D006884 9.6e-46 189.1 268 45.9
BraA03t12828Z Brassica rapa HOM05D005675 ORTHO05D006884 9.6e-46 189.1 260 47.7
A05p38580 Brassica napus HOM05D005675 ORTHO05D006884 2.8e-45 187.6 254 46.5
Glyma.07G130600 Glycine max HOM05D005675 ORTHO05D006884 6.2e-45 186.4 267 43.1
CsaV3_3G021160 Cucumis sativus L. HOM05D005675 ORTHO05D006884 1.1e-44 185.7 280 42.5
AL3G22010 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 1.4e-44 185.3 259 45.2
BcaC05g29447 Brassica carinata HOM05D005675 ORTHO05D006884 3.1e-44 184.1 256 45.3
Thhalv10021093m.g Eutrema salsugineum HOM05D005675 ORTHO05D006884 3.1e-44 184.1 260 45.0
BcaC01g04171 Brassica carinata HOM05D005675 ORTHO05D006884 5.2e-44 183.3 256 46.1
CAN.G486.3 Capsicum annuum HOM05D002496 ORTHO05D002787 2.6e-43 181.0 253 38.7
Migut.L01917 Erythranthe guttata HOM05D005675 ORTHO05D006884 1.7e-42 178.3 272 41.5
BolC3t16698H Brassica oleracea HOM05D005675 ORTHO05D006884 1.1e-41 175.6 256 45.3
Nn8g41130 Nelumbo nucifera HOM05D005675 ORTHO05D006884 1.4e-41 175.3 184 52.7
SGA_v2.0_scaffold21G09606 Striga asiatica HOM05D005675 ORTHO05D006884 1.6e-40 171.8 285 39.6
Haze_19098 Corylus avellana HOM05D005675 ORTHO05D006884 2.7e-40 171.0 283 41.0
Sc26g0001420 Simmondsia chinensis HOM05D005675 ORTHO05D006884 1.0e-39 169.1 205 46.3
TAR383G0085 Trochodendron aralioides HOM05D005675 ORTHO05D006884 1.0e-39 169.1 158 55.1
MELO3C020255.2 Cucumis melo HOM05D005675 ORTHO05D006884 5.1e-39 166.8 266 41.7
SalBow5G0607 Salvia bowleyana HOM05D005675 ORTHO05D006884 1.9e-38 164.9 288 41.0
Nitab4.5_0000899g0040 Nicotiana tabacum HOM05D005675 ORTHO05D006884 4.3e-38 163.7 189 46.6
Hund11839 Selenicereus undatus HOM05D005675 ORTHO05D006884 5.6e-38 163.3 236 41.9
AUR62002223 Chenopodium quinoa HOM05D005675 ORTHO05D006884 8.1e-37 159.5 202 43.6
AUR62015436 Chenopodium quinoa HOM05D005675 ORTHO05D006884 3.1e-36 157.5 197 44.7
C03p44280 Brassica napus HOM05D005675 ORTHO05D006884 5.3e-36 156.8 259 41.7
SHI13641 Sapria himalayana HOM05D005675 ORTHO05D006884 3.4e-35 154.1 273 39.6
Ah.06g185690 Amaranthus hybridus HOM05D005675 ORTHO05D006884 1.9e-33 148.3 192 43.2
CAN.G309.91 Capsicum annuum HOM05D005675 ORTHO05D006884 2.4e-33 147.9 217 37.3
ATR0626G294 Amborella trichopoda HOM05D005675 ORTHO05D006884 3.2e-33 147.5 201 44.3
Lju432C7G1 Lonicera japonica HOM05D005675 ORTHO05D006884 3.2e-33 147.5 187 46.5
EL10Ac3g05860 Beta vulgaris HOM05D005675 ORTHO05D006884 1.2e-32 145.6 194 45.9
Oeu036952.2 Olea europaea HOM05D005675 ORTHO05D006884 2.7e-32 144.4 379 32.2
Haze_19095 Corylus avellana HOM05D005675 ORTHO05D006884 1.0e-31 142.5 120 58.3
HPP92_010804 Vanilla planifolia HOM05D005675 ORTHO05D006884 1.1e-30 139.0 197 38.1
PSO170G0789 Papaver somniferum HOM05D005675 ORTHO05D006884 5.6e-30 136.7 236 39.4
PSO170G3345 Papaver somniferum HOM05D005675 ORTHO05D006884 5.6e-30 136.7 236 39.4
PSO170G4889 Papaver somniferum HOM05D005675 ORTHO05D006884 5.6e-30 136.7 236 39.4
PSO170G5374 Papaver somniferum HOM05D005675 ORTHO05D006884 5.6e-30 136.7 236 39.4
PSO431G0001 Papaver somniferum HOM05D005675 ORTHO05D006884 4.5e-27 127.1 191 41.4
Zm00001eb227160 Zea mays HOM05D005675 ORTHO05D006884 2.2e-26 124.8 237 31.6
Os06g0702800 Oryza sativa ssp. japonica HOM05D005675 ORTHO05D006884 4.9e-26 123.6 278 29.5
CSS0020115 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 1.1e-25 122.5 141 48.9
CDE05G2328 Ceratophyllum demersum HOM05D005675 ORTHO05D006884 3.2e-25 120.9 187 40.6
unitig_578.g16399 Utricularia gibba HOM05D005675 ORTHO05D006884 7.1e-25 119.8 195 40.0
Peaxi162Scf01527g00006 Petunia axillaris HOM05D005675 ORTHO05D006884 1.6e-24 118.6 190 38.4
CARHR085110 Cardamine hirsuta HOM05D005675 ORTHO05D006884 1.1e-20 105.9 185 36.8
PGSC0003DMG400009563 Solanum tuberosum HOM05D005675 ORTHO05D006884 1.5e-19 102.1 148 39.2
Sopen12g008260 Solanum pennellii HOM05D005675 ORTHO05D006884 1.3e-18 99.0 140 40.7
CAN.G1703.6 Capsicum annuum HOM05D002496 ORTHO05D002787 2.9e-18 97.8 110 40.9
CARHR085100 Cardamine hirsuta HOM05D005675 ORTHO05D006884 4.9e-18 97.1 89 62.9
SEGI_03452 Sequoiadendron giganteum HOM05D005675 ORTHO05D006884 1.1e-17 95.9 217 33.2
Sopen12g008240 Solanum pennellii HOM05D005675 ORTHO05D006884 7.9e-16 89.7 86 52.3
Mapoly0082s0059 Marchantia polymorpha HOM05D005675 ORTHO05D006884 8.2e-13 79.7 287 23.7
AagrBONN_evm.TU.Sc2ySwM_228.2452 Anthoceros agrestis HOM05D034800 ORTHO05D006884 3.1e-12 77.8 225 25.3
SMO367G0141 Selaginella moellendorffii HOM05D005675 ORTHO05D006884 5.3e-12 77.0 206 29.1
Pp3c9_5270 Physcomitrium patens HOM05D005675 ORTHO05D006884 4.5e-11 73.9 244 25.0
SEGI_02099 Sequoiadendron giganteum HOM05D005675 ORTHO05D385164 3.0e-07 61.2 94 38.3
SEGI_30577 Sequoiadendron giganteum HOM05D005675 ORTHO05D006884 6.7e-07 60.1 99 36.4
CSS0044900 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 1.1e-06 59.3 64 56.2


User provided reference genes

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