Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G0465 Fragaria x ananassa HOM05D007481 ORTHO05D009444 6.0e-146 520.8 253 100.0
FAN05G5358 Fragaria x ananassa HOM05D007481 ORTHO05D009444 4.4e-133 478.0 237 97.5
RcHm_v2.0_Chr3g0463171 Rosa chinensis HOM05D007481 ORTHO05D009444 1.4e-126 456.4 237 93.7
FAN14G0098 Fragaria x ananassa HOM05D007481 ORTHO05D009444 5.4e-123 444.5 297 76.8
FAN09G2325 Fragaria x ananassa HOM05D007481 ORTHO05D009444 1.2e-114 416.8 237 87.3
Prupe.6G277100 Prunus persica HOM05D007481 ORTHO05D009444 4.6e-114 414.8 239 83.7
MD04G1152000 Malus domestica HOM05D007481 ORTHO05D009444 1.9e-112 409.5 238 82.4
QL07p035708 Quercus lobata HOM05D007481 ORTHO05D009444 3.5e-106 388.7 237 78.1
Potri.006G100100 Populus trichocarpa HOM05D007481 ORTHO05D009444 6.0e-106 387.9 239 77.8
Manes.09G104600 Manihot esculenta HOM05D007481 ORTHO05D009444 1.1e-104 383.6 237 78.1
FvH4_6g11480 Fragaria vesca HOM05D007481 ORTHO05D009444 2.5e-104 382.5 194 96.4
TWI74G0365 Tripterygium wilfordii HOM05D007481 ORTHO05D009444 3.7e-103 378.6 238 75.6
Dinv04699 Davidia involucrata HOM05D007481 ORTHO05D009444 5.3e-102 374.8 238 75.6
PGR031G3607 Punica granatum HOM05D007481 ORTHO05D009444 5.8e-101 371.3 248 74.2
Thecc.05G016400 Theobroma cacao HOM05D007481 ORTHO05D009444 1.0e-100 370.5 253 70.4
CANSAT35G1044 Cannabis sativa HOM05D007481 ORTHO05D009444 1.3e-100 370.2 238 73.9
CiPaw.10G156500 Carya illinoinensis HOM05D007481 ORTHO05D009444 1.3e-100 370.2 238 75.2
Gohir.D09G160700 Gossypium hirsutum HOM05D007481 ORTHO05D009444 2.9e-100 369.0 238 73.1
Sabra06G0076900 Salix brachista HOM05D007481 ORTHO05D009444 8.4e-100 367.5 239 74.1
CSS0016102 Camellia sinensis var. sinensis HOM05D007481 ORTHO05D009444 1.4e-99 366.7 238 73.5
GSVIVG01033961001 Vitis vinifera HOM05D007481 ORTHO05D009444 1.4e-99 366.7 252 72.2
ECA248G3524 Erigeron canadensis HOM05D007481 ORTHO05D009444 1.2e-98 363.6 237 73.8
Cfa017210 Carpinus fangiana HOM05D007481 ORTHO05D009444 1.6e-98 363.2 222 77.0
Aa31LG1G23100 Aethionema arabicum HOM05D007481 ORTHO05D009444 3.5e-98 362.1 238 72.7
Nn2g13707 Nelumbo nucifera HOM05D007481 ORTHO05D009444 6.0e-98 361.3 237 72.2
Sed0020862 Sechium edule HOM05D007481 ORTHO05D009444 1.0e-97 360.5 237 73.8
AL6G10600 Arabidopsis lyrata HOM05D007481 ORTHO05D009444 1.8e-97 359.8 237 74.7
Migut.L02012 Erythranthe guttata HOM05D007481 ORTHO05D009444 2.3e-97 359.4 242 74.0
Carub.0006s0036 Capsella rubella HOM05D007481 ORTHO05D009444 3.9e-97 358.6 237 73.8
CARHR211840 Cardamine hirsuta HOM05D007481 ORTHO05D009444 5.1e-97 358.2 237 73.8
Sp6g40760 Schrenkiella parvula HOM05D007481 ORTHO05D009444 5.1e-97 358.2 237 73.8
Cc06_g01380 Coffea canephora HOM05D007481 ORTHO05D009444 6.7e-97 357.8 242 71.9
COL.COLO4_14539 Corchorus olitorius HOM05D007481 ORTHO05D009444 6.7e-97 357.8 249 69.1
ClCG04G007010 Citrullus lanatus HOM05D007481 ORTHO05D009444 1.5e-96 356.7 238 73.9
HanXRQChr01g0007111 Helianthus annuus HOM05D007481 ORTHO05D009444 1.5e-96 356.7 238 73.5
AT5G01470 Arabidopsis thaliana HOM05D007481 ORTHO05D009444 1.9e-96 356.3 237 74.7
CsaV3_4G026270 Cucumis sativus L. HOM05D007481 ORTHO05D009444 1.9e-96 356.3 238 73.5
CAN.G616.2 Capsicum annuum HOM05D007481 ORTHO05D009444 2.5e-96 355.9 237 72.6
Actinidia11588 Actinidia chinensis HOM05D007481 ORTHO05D009444 4.3e-96 355.1 238 72.3
THA.LOC104816191 Tarenaya hassleriana HOM05D007481 ORTHO05D009444 5.7e-96 354.8 240 72.5
C02p00150 Brassica napus HOM05D007481 ORTHO05D009444 9.7e-96 354.0 244 71.3
Thhalv10014504m.g Eutrema salsugineum HOM05D007481 ORTHO05D009444 9.7e-96 354.0 242 71.1
Gorai.006G182400 Gossypium raimondii HOM05D007481 ORTHO05D009444 3.7e-95 352.1 273 63.4
Medtr4g012440 Medicago truncatula HOM05D007481 ORTHO05D009444 3.7e-95 352.1 242 72.7
SGA_v2.0_scaffold240G44095 Striga asiatica HOM05D003907 ORTHO05D004819 3.7e-95 352.1 245 71.0
PGSC0003DMG400011097 Solanum tuberosum HOM05D007481 ORTHO05D009444 6.3e-95 351.3 237 70.9
BolC2t06012H Brassica oleracea HOM05D007481 ORTHO05D009444 8.2e-95 350.9 244 70.5
Ciclev10012584m.g Citrus clementina HOM05D007481 ORTHO05D009444 8.2e-95 350.9 237 70.9
Nitab4.5_0003666g0020 Nicotiana tabacum HOM05D007481 ORTHO05D009444 8.2e-95 350.9 237 73.0
Peaxi162Scf00009g01813 Petunia axillaris HOM05D007481 ORTHO05D009444 1.1e-94 350.5 237 71.3
Lj3g0018029 Lotus japonicus HOM05D007481 ORTHO05D009444 1.4e-94 350.1 237 73.8
Solyc10g085160.2 Solanum lycopersicum HOM05D007481 ORTHO05D009444 1.4e-94 350.1 237 70.9
MSTRG.10219 Avicennia marina HOM05D007481 ORTHO05D009444 2.4e-94 349.4 245 69.0
Glyma.03G058200 Glycine max HOM05D007481 ORTHO05D009444 2.4e-94 349.4 243 72.0
Sopen10g034630 Solanum pennellii HOM05D007481 ORTHO05D009444 2.4e-94 349.4 237 70.9
BraA02t04685Z Brassica rapa HOM05D007481 ORTHO05D009444 3.1e-94 349.0 244 70.1
Eucgr.B02817 Eucalyptus grandis HOM05D007481 ORTHO05D009444 3.1e-94 349.0 240 70.4
arahy.Tifrunner.gnm1.ann1.7RHW31 Arachis hypogaea HOM05D007481 ORTHO05D009444 2.0e-93 346.3 239 71.5
BcaC03g13078 Brassica carinata HOM05D007481 ORTHO05D009444 2.0e-93 346.3 244 70.5
Lalb_Chr07g0193571 Lupinus albus HOM05D007481 ORTHO05D009444 2.0e-93 346.3 238 71.4
BcaB05g21923 Brassica carinata HOM05D007481 ORTHO05D009444 2.6e-93 345.9 238 71.8
Psat7g244960 Pisum sativum HOM05D007481 ORTHO05D009444 3.4e-93 345.5 240 69.6
Phvul.010G001400 Phaseolus vulgaris HOM05D007481 ORTHO05D009444 1.0e-92 344.0 242 69.8
TPR.G13336 Trifolium pratense HOM05D007481 ORTHO05D009444 1.0e-92 344.0 245 69.8
Nitab4.5_0003024g0060 Nicotiana tabacum HOM05D007481 ORTHO05D009444 8.5e-92 340.9 251 69.3
Aqoxy2G00902 Aquilegia oxysepala HOM05D007481 ORTHO05D009444 2.7e-90 335.9 241 66.0
FAN14G2270 Fragaria x ananassa HOM05D000872 ORTHO05D000777 2.7e-90 335.9 290 64.8
Ca_20231_v3 Cicer arietinum L. HOM05D007481 ORTHO05D009444 3.6e-90 335.5 239 69.5
PSO801G0715 Papaver somniferum HOM05D007481 ORTHO05D009444 1.0e-89 334.0 253 62.8
Sc07g0006570 Simmondsia chinensis HOM05D007481 ORTHO05D009444 1.3e-89 333.6 237 70.0
arahy.Tifrunner.gnm1.ann1.6XTR6T Arachis hypogaea HOM05D007481 ORTHO05D009444 5.1e-89 331.6 239 69.5
Lj3A953G52 Lonicera japonica HOM05D007481 ORTHO05D009444 4.3e-88 328.6 244 68.4
Ah.02g115900 Amaranthus hybridus HOM05D003907 ORTHO05D004819 9.7e-88 327.4 254 63.4
PSO339G5056 Papaver somniferum HOM05D007481 ORTHO05D009444 4.8e-87 325.1 251 63.7
unitig_736.g22787 Utricularia gibba HOM05D007481 ORTHO05D009444 2.6e-85 319.3 234 65.8
Duzib093G0021 Durio zibethinus HOM05D007481 ORTHO05D009444 2.2e-84 316.2 198 74.7
vmacro20262 Vaccinium macrocarpon HOM05D007481 ORTHO05D009444 1.2e-82 310.5 242 65.7
Hund11009 Selenicereus undatus HOM05D007481 ORTHO05D009444 2.1e-82 309.7 277 58.8
MELO3C003292.2 Cucumis melo HOM05D007481 ORTHO05D009444 8.8e-81 304.3 200 74.0
Gohir.A09G165100 Gossypium hirsutum HOM05D007481 ORTHO05D009444 1.7e-79 300.1 196 71.9
Lsat_1_v5_gn_5_149561 Lactuca sativa HOM05D007481 ORTHO05D009444 1.7e-79 300.1 237 62.0
ATR0618G339 Amborella trichopoda HOM05D007481 ORTHO05D009444 5.3e-78 295.0 238 60.5
TAR633G1799 Trochodendron aralioides HOM05D007481 ORTHO05D009444 3.4e-77 292.4 246 58.5
SalBow4G1731 Salvia bowleyana HOM05D007481 ORTHO05D009444 1.7e-76 290.0 182 76.4
Rhsim05G0214800 Rhododendron simsii HOM05D007481 ORTHO05D009444 5.0e-76 288.5 294 51.7
SEGI_08492 Sequoiadendron giganteum HOM05D007481 ORTHO05D009444 2.5e-75 286.2 275 55.3
Zm00001eb063270 Zea mays HOM05D007481 ORTHO05D009444 1.6e-74 283.5 254 55.1
Os03g0826700 Oryza sativa ssp. japonica HOM05D007481 ORTHO05D009444 5.2e-73 278.5 243 59.3
Haze_20985 Corylus avellana HOM05D007481 ORTHO05D009444 1.5e-72 276.9 251 58.6
Cpa.g.sc11.154 Carica papaya HOM05D007481 ORTHO05D009444 1.7e-71 273.5 244 59.4
CDE02G3625 Ceratophyllum demersum HOM05D007481 ORTHO05D009444 2.6e-69 266.2 185 69.2
Pp3c17_21930 Physcomitrium patens HOM05D007481 ORTHO05D009444 1.3e-68 263.8 266 52.6
Mapoly0103s0024 Marchantia polymorpha HOM05D007481 ORTHO05D009444 6.5e-68 261.5 263 55.5
SMO119G0350 Selaginella moellendorffii HOM05D007481 ORTHO05D009444 3.6e-66 255.8 207 59.4
CBR_g4113 Chara braunii HOM05D007481 ORTHO05D009444 3.7e-63 245.7 279 47.7
AagrBONN_evm.TU.Sc2ySwM_228.1780 Anthoceros agrestis HOM05D007481 ORTHO05D009444 2.7e-61 239.6 208 57.2
MBI14_g30737_MAGBIO Magnolia biondii HOM05D007481 ORTHO05D009444 5.7e-56 221.9 254 48.4
DCAR_015418 Daucus carota HOM05D007481 ORTHO05D009444 7.0e-54 214.9 136 74.3
VMungo0331G0457 Vigna mungo HOM05D007481 ORTHO05D009444 2.3e-49 199.9 134 73.1
HPP92_003771 Vanilla planifolia HOM05D007481 ORTHO05D009444 1.6e-45 187.2 180 54.4
Atru.chr8.2241 Acer truncatum HOM05D007481 ORTHO05D009444 5.8e-40 168.7 111 71.2
Oeu006297.1 Olea europaea HOM05D007481 ORTHO05D009444 9.2e-30 134.8 85 77.6
EL10Ac5g12562 Beta vulgaris HOM05D007481 ORTHO05D009444 7.3e-27 125.2 93 68.8
Eucgr.B02818 Eucalyptus grandis HOM05D007481 ORTHO05D009444 7.3e-19 98.6 81 58.0
AUR62030437 Chenopodium quinoa HOM05D007481 ORTHO05D009444 9.0e-09 65.1 32 84.4
SMO307G0066 Selaginella moellendorffii HOM05D002553 ORTHO05D002767 2.2e-07 60.5 124 29.0
Mapoly0001s0305 Marchantia polymorpha HOM05D002956 ORTHO05D008031 2.9e-07 60.1 138 26.8
Hund07046 Selenicereus undatus HOM05D002553 ORTHO05D002767 1.1e-06 58.2 159 26.4
FAN26G2780 Fragaria x ananassa HOM05D005677 ORTHO05D006966 3.2e-06 56.6 197 26.9
FvH4_1g13310 Fragaria vesca HOM05D005677 ORTHO05D006966 5.4e-06 55.8 197 26.9


User provided reference genes

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