Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G0410 Fragaria x ananassa HOM05D030392 ORTHO05D017965 7.7e-81 303.9 171 100.0
FAN02G1192 Fragaria x ananassa HOM05D030392 ORTHO05D017965 1.3e-59 233.4 107 100.0
FAN10G2786 Fragaria x ananassa HOM05D000167 ORTHO05D017965 3.4e-36 155.6 123 81.3
FvH4_6g12200 Fragaria vesca HOM05D000009 ORTHO05D000008 2.9e-19 99.4 47 95.7
FAN09G0926 Fragaria x ananassa HOM05D000406 ORTHO05D002714 6.5e-19 98.2 48 91.7
FAN14G4141 Fragaria x ananassa HOM05D000009 ORTHO05D000008 7.4e-15 84.7 47 85.1
RcHm_v2.0_Chr3g0466331 Rosa chinensis HOM05D000009 ORTHO05D000008 8.2e-14 81.3 55 74.5
FvH4_6g12460 Fragaria vesca HOM05D000009 ORTHO05D017965 9.0e-13 77.8 70 61.4
RcHm_v2.0_Chr4g0412461 Rosa chinensis HOM05D000009 ORTHO05D000008 1.5e-12 77.0 44 81.8
FAN09G1024 Fragaria x ananassa HOM05D000009 ORTHO05D000008 2.0e-12 76.6 48 75.0
RcHm_v2.0_Chr1g0317871 Rosa chinensis HOM05D000009 ORTHO05D000008 2.0e-12 76.6 46 80.4
RcHm_v2.0_Chr1g0317831 Rosa chinensis HOM05D000009 ORTHO05D000008 4.5e-12 75.5 44 84.1
FAN14G5369 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.0e-11 74.3 47 76.6
FvH4_6g13450 Fragaria vesca HOM05D000009 ORTHO05D000008 1.7e-11 73.6 44 81.8
FAN02G1962 Fragaria x ananassa HOM05D000009 ORTHO05D000008 2.2e-11 73.2 44 77.3
RcHm_v2.0_Chr3g0464281 Rosa chinensis HOM05D000009 ORTHO05D000008 5.0e-11 72.0 44 79.5
FvH4_6g15340 Fragaria vesca HOM05D000009 ORTHO05D000008 1.1e-10 70.9 45 73.3
FvH4_6g48881 Fragaria vesca HOM05D000009 ORTHO05D000008 1.4e-10 70.5 45 71.1
Prupe.1G164000 Prunus persica HOM05D000009 ORTHO05D000008 1.4e-10 70.5 46 73.9
RcHm_v2.0_Chr4g0422651 Rosa chinensis HOM05D000009 ORTHO05D000008 1.4e-10 70.5 54 61.1
RcHm_v2.0_Chr1g0317761 Rosa chinensis HOM05D000009 ORTHO05D000008 1.9e-10 70.1 52 69.2
FvH4_6g15220 Fragaria vesca HOM05D000009 ORTHO05D000008 3.2e-10 69.3 44 75.0
FvH4_4g18270 Fragaria vesca HOM05D000009 ORTHO05D000008 5.5e-10 68.6 43 69.8
MD02G1070300 Malus domestica HOM05D000009 ORTHO05D000008 7.1e-10 68.2 46 67.4
FAN05G0867 Fragaria x ananassa HOM05D000009 ORTHO05D000008 9.3e-10 67.8 44 68.2
FAN05G3799 Fragaria x ananassa HOM05D000009 ORTHO05D000008 9.3e-10 67.8 43 72.1
FAN05G5574 Fragaria x ananassa HOM05D000009 ORTHO05D000008 9.3e-10 67.8 44 70.5
Oeu064026.2 Olea europaea HOM05D000009 ORTHO05D000008 9.3e-10 67.8 47 66.0
FAN02G0409 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.2e-09 67.4 43 69.8
MD02G1069600 Malus domestica HOM05D000009 ORTHO05D004635 1.2e-09 67.4 46 65.2
FAN14G0893 Fragaria x ananassa HOM05D000009 ORTHO05D003819 1.6e-09 67.0 44 72.7
RcHm_v2.0_Chr3g0467381 Rosa chinensis HOM05D000009 ORTHO05D000008 2.7e-09 66.2 44 79.5
FAN09G2088 Fragaria x ananassa HOM05D000009 ORTHO05D000008 3.5e-09 65.9 44 63.6
FAN09G2656 Fragaria x ananassa HOM05D000009 ORTHO05D000008 3.5e-09 65.9 44 63.6
FAN09G2823 Fragaria x ananassa HOM05D000009 ORTHO05D004635 3.5e-09 65.9 44 68.2
FAN09G3643 Fragaria x ananassa HOM05D000009 ORTHO05D000008 3.5e-09 65.9 44 68.2
RcHm_v2.0_Chr3g0468291 Rosa chinensis HOM05D000009 ORTHO05D000008 3.5e-09 65.9 43 69.8
FvH4_6g48310 Fragaria vesca HOM05D000009 ORTHO05D000008 4.6e-09 65.5 43 65.1
RcHm_v2.0_Chr4g0414171 Rosa chinensis HOM05D000009 ORTHO05D017965 6.1e-09 65.1 45 66.7
FAN02G2931 Fragaria x ananassa HOM05D000009 ORTHO05D000008 7.9e-09 64.7 44 65.9
FAN05G1998 Fragaria x ananassa HOM05D000009 ORTHO05D000008 7.9e-09 64.7 49 61.2
FAN05G5012 Fragaria x ananassa HOM05D000449 ORTHO05D004635 7.9e-09 64.7 44 77.3
QL10p057019 Quercus lobata HOM05D000009 ORTHO05D000008 7.9e-09 64.7 44 65.9
FvH4_4g13530 Fragaria vesca HOM05D000009 ORTHO05D004635 1.0e-08 64.3 43 65.1
FAN02G0362 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.0e-08 64.3 43 69.8
Prupe.1G163800 Prunus persica HOM05D000009 ORTHO05D000008 1.0e-08 64.3 44 68.2
RcHm_v2.0_Chr3g0490761 Rosa chinensis HOM05D000009 ORTHO05D000008 1.0e-08 64.3 43 69.8
Oeu064025.1 Olea europaea HOM05D000009 ORTHO05D000008 1.3e-08 63.9 45 71.1
FvH4_6g47980 Fragaria vesca HOM05D000009 ORTHO05D000008 1.8e-08 63.5 43 67.4
FAN05G4974 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.8e-08 63.5 41 70.7
FAN14G0458 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.8e-08 63.5 44 63.6
FAN14G3082 Fragaria x ananassa HOM05D000009 ORTHO05D000008 2.3e-08 63.2 43 65.1
RcHm_v2.0_Chr3g0468571 Rosa chinensis HOM05D000009 ORTHO05D000008 2.3e-08 63.2 43 67.4
FAN09G1611 Fragaria x ananassa HOM05D000009 ORTHO05D000008 3.0e-08 62.8 43 67.4
FAN09G2737 Fragaria x ananassa HOM05D000009 ORTHO05D000008 3.0e-08 62.8 43 67.4
RcHm_v2.0_Chr1g0350501 Rosa chinensis HOM05D000009 ORTHO05D000008 3.9e-08 62.4 44 65.9
Prupe.2G111700 Prunus persica HOM05D000009 ORTHO05D000008 5.1e-08 62.0 44 65.9
FvH4_6g15090 Fragaria vesca HOM05D000009 ORTHO05D000008 8.7e-08 61.2 57 52.6
MD11G1051100 Malus domestica HOM05D000009 ORTHO05D000008 8.7e-08 61.2 45 68.9
Prupe.6G243700 Prunus persica HOM05D000009 ORTHO05D000008 8.7e-08 61.2 46 58.7
COL.COLO4_00163 Corchorus olitorius HOM05D000009 ORTHO05D000008 1.1e-07 60.8 44 61.4
FvH4_6g48850 Fragaria vesca HOM05D000009 ORTHO05D004635 1.1e-07 60.8 43 65.1
RcHm_v2.0_Chr3g0468341 Rosa chinensis HOM05D000009 ORTHO05D004635 1.1e-07 60.8 45 62.2
RcHm_v2.0_Chr4g0417011 Rosa chinensis HOM05D000009 ORTHO05D000008 1.1e-07 60.8 49 61.2
Hma1.2p1_0058F.1_g032440 Hydrangea macrophylla HOM05D000009 ORTHO05D004635 1.5e-07 60.5 44 63.6
Prupe.6G243500 Prunus persica HOM05D000009 ORTHO05D004635 1.5e-07 60.5 44 59.1
Prupe.6G243800 Prunus persica HOM05D000009 ORTHO05D000008 1.5e-07 60.5 44 61.4
FAN01G1989 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.9e-07 60.1 44 65.9
MD04G1113400 Malus domestica HOM05D000009 ORTHO05D000008 1.9e-07 60.1 44 61.4
RcHm_v2.0_Chr4g0422451 Rosa chinensis HOM05D000009 ORTHO05D004635 1.9e-07 60.1 43 67.4
MD11G1051600 Malus domestica HOM05D000009 ORTHO05D000008 2.5e-07 59.7 47 63.8
Potri.004G170700 Populus trichocarpa HOM05D000009 ORTHO05D000008 2.5e-07 59.7 43 62.8
RcHm_v2.0_Chr4g0417041 Rosa chinensis HOM05D000009 ORTHO05D000008 2.5e-07 59.7 49 59.2
Cc00_g26950 Coffea canephora HOM05D000009 ORTHO05D004635 3.3e-07 59.3 44 61.4
Cc00_g26960 Coffea canephora HOM05D000009 ORTHO05D000008 3.3e-07 59.3 44 61.4
MD04G1211100 Malus domestica HOM05D000009 ORTHO05D017965 3.3e-07 59.3 47 59.6
QL07p043360 Quercus lobata HOM05D000009 ORTHO05D000008 3.3e-07 59.3 51 52.9
RcHm_v2.0_Chr4g0414161 Rosa chinensis HOM05D000009 ORTHO05D004635 3.3e-07 59.3 43 60.5
RcHm_v2.0_Chr4g0418861 Rosa chinensis HOM05D000009 ORTHO05D000008 3.3e-07 59.3 43 65.1
Gohir.D08G099200 Gossypium hirsutum HOM05D000009 ORTHO05D000008 4.3e-07 58.9 44 61.4
Gorai.004G107000 Gossypium raimondii HOM05D000009 ORTHO05D000008 4.3e-07 58.9 44 61.4
Prupe.1G163700 Prunus persica HOM05D000009 ORTHO05D000008 4.3e-07 58.9 46 60.9
RcHm_v2.0_Chr3g0452091 Rosa chinensis HOM05D000009 ORTHO05D000008 4.3e-07 58.9 42 61.9
RcHm_v2.0_Chr4g0417531 Rosa chinensis HOM05D000009 ORTHO05D000008 4.3e-07 58.9 45 64.4
Cc01_g00430 Coffea canephora HOM05D000009 ORTHO05D000008 5.7e-07 58.5 43 69.8
Hma1.2p1_0349F.1_g132350 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 5.7e-07 58.5 44 63.6
Prupe.2G111800 Prunus persica HOM05D000009 ORTHO05D000008 5.7e-07 58.5 44 61.4
Prupe.6G243400 Prunus persica HOM05D000009 ORTHO05D000008 5.7e-07 58.5 44 61.4
RcHm_v2.0_Chr4g0417731 Rosa chinensis HOM05D000009 ORTHO05D000008 5.7e-07 58.5 43 65.1
RcHm_v2.0_Chr4g0418901 Rosa chinensis HOM05D000009 ORTHO05D000008 5.7e-07 58.5 43 65.1
Cc00_g27960 Coffea canephora HOM05D000009 ORTHO05D000008 7.4e-07 58.2 47 61.7
MD02G1071900 Malus domestica HOM05D000009 ORTHO05D000008 7.4e-07 58.2 48 56.2
MD05G1243400 Malus domestica HOM05D000009 ORTHO05D000008 7.4e-07 58.2 44 61.4
Oeu064046.1 Olea europaea HOM05D000009 ORTHO05D000008 7.4e-07 58.2 45 64.4
QL10p059113 Quercus lobata HOM05D000009 ORTHO05D000008 7.4e-07 58.2 44 61.4
RcHm_v2.0_Chr4g0418791 Rosa chinensis HOM05D000009 ORTHO05D000008 7.4e-07 58.2 41 63.4
Cc01_g03250 Coffea canephora HOM05D000009 ORTHO05D000008 9.7e-07 57.8 43 69.8
MD03G1054400 Malus domestica HOM05D000009 ORTHO05D000008 9.7e-07 57.8 43 65.1
Prupe.2G067500 Prunus persica HOM05D000009 ORTHO05D000008 9.7e-07 57.8 44 61.4
QL10p035024 Quercus lobata HOM05D000009 ORTHO05D000008 9.7e-07 57.8 44 59.1
QL10p058697 Quercus lobata HOM05D000009 ORTHO05D000008 9.7e-07 57.8 44 61.4
Cc01_g00440 Coffea canephora HOM05D000009 ORTHO05D000008 1.3e-06 57.4 43 67.4
Gohir.A08G088162 Gossypium hirsutum HOM05D000009 ORTHO05D000008 1.3e-06 57.4 44 61.4
MD02G1059900 Malus domestica HOM05D000009 ORTHO05D000008 1.3e-06 57.4 44 63.6
CSS0008440 Camellia sinensis var. sinensis HOM05D000009 ORTHO05D000008 1.6e-06 57.0 42 61.9
CSS0048754 Camellia sinensis var. sinensis HOM05D000009 ORTHO05D000008 1.6e-06 57.0 42 61.9
AUR62014333 Chenopodium quinoa HOM05D000009 ORTHO05D000008 1.6e-06 57.0 43 53.5
Cc01_g00470 Coffea canephora HOM05D000009 ORTHO05D000008 1.6e-06 57.0 43 69.8
Cc05_g08200 Coffea canephora HOM05D000009 ORTHO05D000008 1.6e-06 57.0 42 61.9
FvH4_6g15250 Fragaria vesca HOM05D000009 ORTHO05D000008 1.6e-06 57.0 44 61.4
FAN09G3254 Fragaria x ananassa HOM05D000009 ORTHO05D004635 1.6e-06 57.0 37 73.0
FAN14G1045 Fragaria x ananassa HOM05D000009 ORTHO05D000008 1.6e-06 57.0 44 61.4
MD03G1052500 Malus domestica HOM05D000009 ORTHO05D000008 1.6e-06 57.0 56 57.1
MD11G1046900 Malus domestica HOM05D000009 ORTHO05D004635 1.6e-06 57.0 42 66.7
MD11G1051700 Malus domestica HOM05D000009 ORTHO05D004635 1.6e-06 57.0 45 64.4
QL10p059153 Quercus lobata HOM05D000009 ORTHO05D000008 1.6e-06 57.0 46 58.7
Cc00_g19390 Coffea canephora HOM05D000009 ORTHO05D000008 2.2e-06 56.6 43 67.4
Cc00_g26460 Coffea canephora HOM05D000009 ORTHO05D000008 2.2e-06 56.6 46 65.2
Cc03_g15410 Coffea canephora HOM05D000009 ORTHO05D000008 2.2e-06 56.6 44 59.1
Gohir.A03G010600 Gossypium hirsutum HOM05D000009 ORTHO05D000008 2.2e-06 56.6 44 59.1
Cc00_g27710 Coffea canephora HOM05D000009 ORTHO05D004635 2.8e-06 56.2 43 69.8
Cc01_g00610 Coffea canephora HOM05D000009 ORTHO05D000008 2.8e-06 56.2 42 71.4
Hma1.2p1_0177F.1_g077820 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 2.8e-06 56.2 44 63.6
Oeu024329.1 Olea europaea HOM05D000009 ORTHO05D000008 2.8e-06 56.2 46 63.0
RcHm_v2.0_Chr4g0417021 Rosa chinensis HOM05D000009 ORTHO05D000008 2.8e-06 56.2 43 60.5
Thecc.04G157700 Theobroma cacao HOM05D000009 ORTHO05D000008 2.8e-06 56.2 44 61.4
Cc01_g05230 Coffea canephora HOM05D000009 ORTHO05D000008 3.7e-06 55.8 47 59.6
Hma1.2p1_0177F.1_g077830 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 3.7e-06 55.8 42 64.3
MD02G1070800 Malus domestica HOM05D000009 ORTHO05D004635 3.7e-06 55.8 44 61.4
RcHm_v2.0_Chr4g0417111 Rosa chinensis HOM05D000009 ORTHO05D004635 3.7e-06 55.8 47 55.3
Cc03_g15450 Coffea canephora HOM05D000009 ORTHO05D000008 4.8e-06 55.5 44 59.1
Cc05_g07430 Coffea canephora HOM05D000009 ORTHO05D000008 4.8e-06 55.5 42 59.5
Hma1.2p1_0177F.1_g077840 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 4.8e-06 55.5 44 61.4
Oeu003360.1 Olea europaea HOM05D000009 ORTHO05D000008 4.8e-06 55.5 55 52.7
Oeu038939.1 Olea europaea HOM05D000009 ORTHO05D000008 4.8e-06 55.5 47 57.4
EL10Ac1g01016 Beta vulgaris HOM05D000009 ORTHO05D000008 6.3e-06 55.1 41 58.5
Cc00_g23630 Coffea canephora HOM05D000009 ORTHO05D000008 6.3e-06 55.1 43 65.1
Cc00_g24870 Coffea canephora HOM05D000009 ORTHO05D000008 6.3e-06 55.1 46 63.0
Cc00_g26280 Coffea canephora HOM05D000009 ORTHO05D000008 6.3e-06 55.1 43 67.4
Cc00_g26930 Coffea canephora HOM05D000009 ORTHO05D000008 6.3e-06 55.1 43 65.1
Cc00_g28740 Coffea canephora HOM05D000009 ORTHO05D000008 6.3e-06 55.1 48 60.4
Cc01_g02020 Coffea canephora HOM05D000009 ORTHO05D000008 6.3e-06 55.1 47 61.7
Hma1.2p1_0177F.1_g077860 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 6.3e-06 55.1 44 63.6
QL04p065783 Quercus lobata HOM05D000009 ORTHO05D000008 6.3e-06 55.1 45 60.0
QL04p066010 Quercus lobata HOM05D000009 ORTHO05D000008 6.3e-06 55.1 46 58.7
Cc01_g00420 Coffea canephora HOM05D000009 ORTHO05D000008 8.2e-06 54.7 47 61.7
Cc01_g02250 Coffea canephora HOM05D000009 ORTHO05D000008 8.2e-06 54.7 43 67.4
Cc05_g06600 Coffea canephora HOM05D000009 ORTHO05D000008 8.2e-06 54.7 42 59.5
Hma1.2p1_0734F.1_g210370 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 8.2e-06 54.7 44 56.8
Hma1.2p1_2465F.1_g322620 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 8.2e-06 54.7 44 56.8
MD02G1071400 Malus domestica HOM05D000009 ORTHO05D000008 8.2e-06 54.7 48 58.3
MD11G1050400 Malus domestica HOM05D000009 ORTHO05D000008 8.2e-06 54.7 45 66.7
MD12G1127500 Malus domestica HOM05D000009 ORTHO05D000008 8.2e-06 54.7 43 58.1
Potri.004G169800 Populus trichocarpa HOM05D000009 ORTHO05D000008 8.2e-06 54.7 43 60.5
Potri.013G041800 Populus trichocarpa HOM05D000009 ORTHO05D000008 8.2e-06 54.7 43 62.8


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