Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G0304 Fragaria x ananassa HOM05D008889 ORTHO05D009956 2.3e-61 238.8 126 100.0
FvH4_6g45950 Fragaria vesca HOM05D008889 ORTHO05D009956 2.5e-60 235.3 126 98.4
FAN14G5446 Fragaria x ananassa HOM05D008889 ORTHO05D009956 2.5e-60 235.3 126 98.4
FAN05G4365 Fragaria x ananassa HOM05D008889 ORTHO05D009956 4.2e-60 234.6 126 97.6
FAN09G2052 Fragaria x ananassa HOM05D008889 ORTHO05D009956 9.5e-60 233.4 126 97.6
RcHm_v2.0_Chr2g0164181 Rosa chinensis HOM05D008889 ORTHO05D009956 5.2e-58 227.6 126 94.4
MD17G1069000 Malus domestica HOM05D008889 ORTHO05D009956 7.3e-28 127.5 124 65.3
Prupe.3G245600 Prunus persica HOM05D008889 ORTHO05D009956 1.9e-23 112.8 129 57.4
Potri.004G108840 Populus trichocarpa HOM05D008889 ORTHO05D009956 6.0e-14 81.3 82 54.9
TPR.G3280 Trifolium pratense HOM05D008889 ORTHO05D009956 2.3e-13 79.3 134 42.5
TWI60G1323 Tripterygium wilfordii HOM05D008889 ORTHO05D009956 2.3e-13 79.3 123 47.2
Glyma.08G254600 Glycine max HOM05D008889 ORTHO05D009956 3.0e-13 79.0 132 44.7
Sabra04G0073700 Salix brachista HOM05D008889 ORTHO05D009956 3.9e-13 78.6 99 48.5
Phvul.008G023501 Phaseolus vulgaris HOM05D008889 ORTHO05D009956 5.1e-13 78.2 129 45.0
Potri.017G107000 Populus trichocarpa HOM05D008889 ORTHO05D009956 5.1e-13 78.2 131 43.5
QL02p063786 Quercus lobata HOM05D009227 ORTHO05D009956 5.1e-13 78.2 83 59.0
Manes.02G062300 Manihot esculenta HOM05D008889 ORTHO05D009956 8.7e-13 77.4 129 41.9
Duzib133G1477 Durio zibethinus HOM05D008889 ORTHO05D009956 1.5e-12 76.6 119 43.7
Gohir.A08G052300 Gossypium hirsutum HOM05D008889 ORTHO05D009956 3.3e-12 75.5 81 54.3
Gorai.004G064000 Gossypium raimondii HOM05D009227 ORTHO05D009956 3.3e-12 75.5 80 55.0
Ca_23534_v3 Cicer arietinum L. HOM05D008889 ORTHO05D009956 1.6e-11 73.2 135 40.0
Medtr7g017790 Medicago truncatula HOM05D008889 ORTHO05D009956 8.1e-11 70.9 125 40.0
CANSAT64G2743 Cannabis sativa HOM05D008889 ORTHO05D009956 1.1e-10 70.5 125 44.8
Lalb_Chr10g0092501 Lupinus albus HOM05D008889 ORTHO05D009956 1.1e-10 70.5 133 42.9
Gohir.D08G061900 Gossypium hirsutum HOM05D009227 ORTHO05D009956 1.4e-10 70.1 126 42.9
Thecc.04G112500 Theobroma cacao HOM05D008889 ORTHO05D009956 1.4e-10 70.1 87 51.7
BcaC06g30842 Brassica carinata HOM05D009227 ORTHO05D009956 1.8e-10 69.7 135 45.2
Sp2g18210 Schrenkiella parvula HOM05D009227 ORTHO05D009956 1.8e-10 69.7 129 45.0
Sabra17G0089900 Salix brachista HOM05D008889 ORTHO05D009956 2.4e-10 69.3 127 39.4
Manes.01G105700 Manihot esculenta HOM05D008889 ORTHO05D009956 5.3e-10 68.2 122 43.4
BcaB07g30061 Brassica carinata HOM05D009227 ORTHO05D009956 9.0e-10 67.4 72 52.8
Carub.0007s3707 Capsella rubella HOM05D009227 ORTHO05D009956 9.0e-10 67.4 124 41.1
AL7G51640 Arabidopsis lyrata HOM05D009227 ORTHO05D009956 2.0e-09 66.2 74 45.9
Lj1g0003987 Lotus japonicus HOM05D008889 ORTHO05D009956 2.0e-09 66.2 127 40.9
A06p39660 Brassica napus HOM05D009227 ORTHO05D009956 5.8e-09 64.7 121 44.6
BraA06t26881Z Brassica rapa HOM05D009227 ORTHO05D009956 5.8e-09 64.7 121 44.6
Lalb_Chr04g0258271 Lupinus albus HOM05D008889 ORTHO05D009956 5.8e-09 64.7 134 41.8
TWI34G1181 Tripterygium wilfordii HOM05D008889 ORTHO05D009956 7.6e-09 64.3 122 41.0
BcaC06g33727 Brassica carinata HOM05D009227 ORTHO05D009956 9.9e-09 63.9 121 43.8
C07p38630 Brassica napus HOM05D009227 ORTHO05D009956 9.9e-09 63.9 121 43.8
BolC7t44384H Brassica oleracea HOM05D009227 ORTHO05D009956 9.9e-09 63.9 121 43.8
unitig_744.g24288 Utricularia gibba HOM05D009227 ORTHO05D009956 9.9e-09 63.9 72 48.6
A02p37090 Brassica napus HOM05D009227 ORTHO05D009956 1.3e-08 63.5 74 54.1
BraA02t08695Z Brassica rapa HOM05D009227 ORTHO05D009956 1.3e-08 63.5 74 54.1
AT5G38790 Arabidopsis thaliana HOM05D009227 ORTHO05D009956 1.7e-08 63.2 75 45.3
C02p56090 Brassica napus HOM05D009227 ORTHO05D009956 2.2e-08 62.8 74 54.1
BolC2t11666H Brassica oleracea HOM05D009227 ORTHO05D009956 2.2e-08 62.8 74 54.1
CARHR264020 Cardamine hirsuta HOM05D009227 ORTHO05D009956 2.2e-08 62.8 104 38.5
Duzib138G0287 Durio zibethinus HOM05D008889 ORTHO05D009956 3.8e-08 62.0 83 47.0
Oeu024138.1 Olea europaea HOM05D011353 ORTHO05D009956 8.4e-08 60.8 81 48.1
Aa31LG9G16880 Aethionema arabicum HOM05D009227 ORTHO05D009956 1.9e-07 59.7 75 53.3
Thhalv10005597m.g Eutrema salsugineum HOM05D009227 ORTHO05D009956 2.4e-07 59.3 106 44.3
Carub.0009s0002 Capsella rubella HOM05D009227 ORTHO05D009956 3.2e-07 58.9 130 39.2
CiPaw.04G050600 Carya illinoinensis HOM05D008889 ORTHO05D009956 7.1e-07 57.8 132 42.4
unitig_27.g25224 Utricularia gibba HOM05D008889 ORTHO05D009956 1.2e-06 57.0 80 47.5
Cc11_g11230 Coffea canephora HOM05D011353 ORTHO05D009956 3.5e-06 55.5 119 44.5
Psat3g194040 Pisum sativum HOM05D008889 ORTHO05D009956 3.5e-06 55.5 135 37.0
THA.LOC104805540 Tarenaya hassleriana HOM05D009227 ORTHO05D009956 3.5e-06 55.5 146 37.0
Sed0005169 Sechium edule HOM05D008563 ORTHO05D009802 6.0e-06 54.7 124 39.5
CSS0034251 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 7.9e-06 54.3 81 44.4
CSS0042453 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 7.9e-06 54.3 81 44.4
Psat4g045520 Pisum sativum HOM05D008563 ORTHO05D009802 7.9e-06 54.3 80 48.8


User provided reference genes

Program Settings