Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G0248 Fragaria x ananassa HOM05D006368 ORTHO05D025547 5.4e-242 840.5 405 100.0
FAN05G1788 Fragaria x ananassa HOM05D006368 ORTHO05D025547 5.8e-236 820.5 405 96.8
FvH4_6g46020 Fragaria vesca HOM05D006368 ORTHO05D025547 8.7e-232 806.6 398 97.0
FAN14G1520 Fragaria x ananassa HOM05D006368 ORTHO05D025547 8.7e-232 806.6 398 97.0
FAN14G5490 Fragaria x ananassa HOM05D006368 ORTHO05D025547 8.7e-232 806.6 398 97.0
FAN09G1555 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.1e-51 206.8 112 91.1
FvH4_6g47002 Fragaria vesca HOM05D006368 ORTHO05D006739 9.2e-48 195.3 395 37.0
FAN02G0373 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.6e-47 194.5 391 36.8
FAN14G0640 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.8e-47 192.2 395 36.7
FvH4_6g47001 Fragaria vesca HOM05D006368 ORTHO05D006739 8.9e-43 178.7 375 36.5
FAN14G2751 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.6e-42 177.2 341 37.5
FAN02G0212 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.9e-41 172.9 410 34.6
FAN08G0813 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.9e-41 172.9 390 35.9
FAN18G3544 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.1e-40 171.8 390 35.9
FAN13G2475 Fragaria x ananassa HOM05D006368 ORTHO05D006739 6.0e-39 166.0 391 34.8
RcHm_v2.0_Chr2g0153831 Rosa chinensis HOM05D006368 ORTHO05D006739 1.0e-38 165.2 377 35.5
FAN14G2460 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.5e-37 161.4 403 34.7
FAN02G1276 Fragaria x ananassa HOM05D005035 ORTHO05D006141 1.9e-37 161.0 376 34.0
FvH4_6g49640 Fragaria vesca HOM05D006368 ORTHO05D006739 4.3e-37 159.8 403 34.5
RcHm_v2.0_Chr7g0197821 Rosa chinensis HOM05D006368 ORTHO05D006739 2.1e-36 157.5 368 34.5
FAN02G3903 Fragaria x ananassa HOM05D006368 ORTHO05D006739 8.1e-36 155.6 392 32.7
FvH4_6g37591 Fragaria vesca HOM05D006368 ORTHO05D006739 3.1e-35 153.7 380 33.7
MD09G1050100 Malus domestica HOM05D006368 ORTHO05D006739 3.1e-35 153.7 392 34.9
MD09G1027500 Malus domestica HOM05D006368 ORTHO05D006739 4.0e-35 153.3 420 33.1
RcHm_v2.0_Chr4g0430971 Rosa chinensis HOM05D006368 ORTHO05D006739 5.2e-35 152.9 411 32.8
RcHm_v2.0_Chr5g0067081 Rosa chinensis HOM05D006368 ORTHO05D006739 8.9e-35 152.1 411 33.1
FvH4_5g02330 Fragaria vesca HOM05D006368 ORTHO05D006739 5.8e-34 149.4 390 33.1
FAN20G1708 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.3e-33 148.3 404 33.2
FAN24G2342 Fragaria x ananassa HOM05D006368 ORTHO05D006739 8.3e-33 145.6 426 32.4
FvH4_3g30930 Fragaria vesca HOM05D006368 ORTHO05D006739 5.4e-32 142.9 360 34.4
Prupe.3G239100 Prunus persica HOM05D006368 ORTHO05D006739 2.3e-30 137.5 421 31.6
FvH4_2g28870 Fragaria vesca HOM05D006368 ORTHO05D006739 5.1e-30 136.3 375 33.1
Prupe.3G291200 Prunus persica HOM05D006368 ORTHO05D006739 8.6e-30 135.6 265 36.2
FvH4_6g47170 Fragaria vesca HOM05D006368 ORTHO05D006739 1.9e-29 134.4 383 32.4
FvH4_6g37552 Fragaria vesca HOM05D006368 ORTHO05D006739 3.3e-29 133.7 365 30.1
FAN02G0769 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.4e-27 127.5 367 30.0
FAN15G3238 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.4e-27 127.5 324 32.1
RcHm_v2.0_Chr2g0166171 Rosa chinensis HOM05D006368 ORTHO05D006739 3.1e-27 127.1 383 34.2
FAN09G3687 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.2e-27 126.3 381 32.5
FvH4_6g47140 Fragaria vesca HOM05D006368 ORTHO05D006739 1.2e-26 125.2 409 31.1
FAN14G5568 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.8e-26 122.9 410 31.2
FvH4_6g49281 Fragaria vesca HOM05D006368 ORTHO05D006739 1.3e-25 121.7 364 32.7
FAN12G2895 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.7e-25 121.3 409 29.1
FAN09G2575 Fragaria x ananassa HOM05D006368 ORTHO05D006739 8.4e-25 119.0 349 33.8
FvH4_6g47130 Fragaria vesca HOM05D006368 ORTHO05D006739 2.4e-24 117.5 373 30.6
FAN14G1492 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.2e-24 116.7 377 30.2
RcHm_v2.0_Chr2g0166201 Rosa chinensis HOM05D006368 ORTHO05D006739 5.4e-24 116.3 416 30.0
FvH4_4g23711 Fragaria vesca HOM05D006368 ORTHO05D006739 2.7e-23 114.0 410 29.0
MD03G1085600 Malus domestica HOM05D006368 ORTHO05D006739 3.5e-23 113.6 328 33.5
FAN14G0584 Fragaria x ananassa HOM05D006368 ORTHO05D006739 6.0e-23 112.8 344 30.2
FAN14G2798 Fragaria x ananassa HOM05D006368 ORTHO05D006739 6.0e-23 112.8 344 30.2
FAN09G4055 Fragaria x ananassa HOM05D006368 ORTHO05D006739 7.8e-23 112.5 377 30.2
FAN02G2985 Fragaria x ananassa HOM05D002060 ORTHO05D002098 1.7e-22 111.3 367 31.1
FAN05G1932 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.0e-22 110.5 322 32.3
FAN14G0813 Fragaria x ananassa HOM05D006368 ORTHO05D006739 8.7e-22 109.0 336 32.1
FvH4_6g36920 Fragaria vesca HOM05D006368 ORTHO05D006739 2.5e-21 107.5 363 32.5
FvH4_6g47190 Fragaria vesca HOM05D006368 ORTHO05D006739 9.6e-21 105.5 340 30.6
FAN04G2785 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.1e-20 104.4 372 29.8
FAN09G0854 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.7e-20 103.2 326 30.7
FvH4_6g49120 Fragaria vesca HOM05D006368 ORTHO05D006739 6.9e-19 99.4 292 33.2
FAN14G0979 Fragaria x ananassa HOM05D006368 ORTHO05D006739 9.0e-19 99.0 245 32.2
FAN14G1402 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.4e-18 97.1 375 27.5
FAN05G3215 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.4e-18 96.7 329 30.7
FAN05G3822 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.7e-17 94.7 346 30.3
TPR.G25164 Trifolium pratense HOM05D010147 ORTHO05D006739 2.2e-17 94.4 345 27.8
FAN02G1786 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.8e-17 93.6 243 32.5
FAN17G1663 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.4e-16 90.9 305 28.9
FAN05G4829 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.4e-16 89.7 310 30.0
FAN09G0606 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.6e-15 88.2 177 33.9
FAN16G0274 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.1e-15 87.8 266 34.6
TPR.G21321 Trifolium pratense HOM05D010147 ORTHO05D006739 2.3e-14 84.3 341 27.6
FAN24G0202 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.0e-14 84.0 325 28.6
FAN15G0762 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.1e-13 82.0 324 29.0
Ca_03009_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 1.5e-13 81.6 273 28.9
FAN02G2469 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.5e-13 81.6 268 32.5
Lj2g0002702 Lotus japonicus HOM05D006368 ORTHO05D006739 1.9e-13 81.3 315 29.8
FAN10G0746 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.5e-13 80.9 373 26.8
FAN14G3911 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.5e-13 80.9 373 26.8
Medtr7g069870 Medicago truncatula HOM05D010147 ORTHO05D006739 4.3e-13 80.1 335 26.6
FvH4_3g37301 Fragaria vesca HOM05D006368 ORTHO05D006739 7.3e-13 79.3 202 34.7
FvH4_3g37281 Fragaria vesca HOM05D006368 ORTHO05D006739 1.6e-12 78.2 205 33.2
Ca_07672_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 6.2e-12 76.3 378 24.9
Medtr1g069530 Medicago truncatula HOM05D010147 ORTHO05D006739 6.2e-12 76.3 315 24.4
Medtr7g069820 Medicago truncatula HOM05D010147 ORTHO05D006739 1.8e-11 74.7 334 24.3
Medtr7g069800 Medicago truncatula HOM05D010147 ORTHO05D006739 5.3e-11 73.2 337 24.3
TPR.G6682 Trifolium pratense HOM05D010147 ORTHO05D006739 5.3e-11 73.2 327 26.3
FvH4_3g37300 Fragaria vesca HOM05D006368 ORTHO05D006739 1.2e-10 72.0 153 32.0
Medtr7g069850 Medicago truncatula HOM05D010147 ORTHO05D006739 1.5e-10 71.6 314 26.4
Ca_07681_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 2.0e-10 71.2 332 26.2
FAN02G0044 Fragaria x ananassa HOM05D006368 ORTHO05D006739 2.6e-10 70.9 198 31.8
Medtr1g069525 Medicago truncatula HOM05D010147 ORTHO05D006739 2.6e-10 70.9 315 23.8
Medtr7g069840 Medicago truncatula HOM05D010147 ORTHO05D006739 3.4e-10 70.5 313 26.5
Ca_07674_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 4.5e-10 70.1 326 27.3
FAN09G3776 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.5e-10 70.1 139 37.4
FAN14G3548 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.8e-10 69.7 154 37.7
FAN14G3542 Fragaria x ananassa HOM05D005035 ORTHO05D006141 2.2e-09 67.8 77 42.9
Prupe.1G016300 Prunus persica HOM05D006368 ORTHO05D006739 2.2e-09 67.8 272 29.4
Ca_07683_v3 Cicer arietinum L. HOM05D010147 ORTHO05D006739 6.4e-09 66.2 205 28.8
FAN05G1009 Fragaria x ananassa HOM05D006368 ORTHO05D006739 6.4e-09 66.2 215 30.7
Medtr1g025800 Medicago truncatula HOM05D010147 ORTHO05D006739 8.4e-09 65.9 268 24.6
PSO210G5407 Papaver somniferum HOM05D000151 ORTHO05D000074 8.4e-09 65.9 382 25.9
FAN09G0974 Fragaria x ananassa HOM05D005035 ORTHO05D006141 1.4e-08 65.1 71 43.7
FAN02G1675 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.2e-08 63.9 106 36.8
TPR.G38170 Trifolium pratense HOM05D010147 ORTHO05D006739 4.2e-08 63.5 351 24.8
FvH4_6g49280 Fragaria vesca HOM05D006368 ORTHO05D006739 7.1e-08 62.8 220 31.8
FAN09G3725 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.2e-07 62.0 174 32.2
FAN28G1502 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.6e-07 61.6 113 36.3
TPR.G28611 Trifolium pratense HOM05D004989 ORTHO05D006739 2.1e-07 61.2 352 23.6
FAN07G0106 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.5e-07 60.5 161 32.9
FAN09G1584 Fragaria x ananassa HOM05D006368 ORTHO05D035370 3.5e-07 60.5 147 33.3
FAN22G2413 Fragaria x ananassa HOM05D006368 ORTHO05D006739 3.5e-07 60.5 229 28.4
FAN02G3800 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.6e-07 60.1 115 34.8
FAN05G0250 Fragaria x ananassa HOM05D006368 ORTHO05D006739 4.6e-07 60.1 195 33.8
FAN05G0916 Fragaria x ananassa HOM05D006368 ORTHO05D006739 1.8e-06 58.2 78 41.0
FvH4_2g03062 Fragaria vesca HOM05D007346 ORTHO05D009044 3.9e-06 57.0 182 27.5
FAN24G2319 Fragaria x ananassa HOM05D007346 ORTHO05D009044 3.9e-06 57.0 182 27.5
FAN15G3747 Fragaria x ananassa HOM05D006368 ORTHO05D006739 5.1e-06 56.6 102 43.1
FAN14G0026 Fragaria x ananassa HOM05D006368 ORTHO05D006739 8.7e-06 55.8 140 32.1


User provided reference genes

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