Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G0158 Fragaria x ananassa HOM05D006059 ORTHO05D207876 4.4e-205 717.6 335 100.0
FAN25G3455 Fragaria x ananassa HOM05D006059 ORTHO05D207604 2.8e-135 485.7 284 84.5
FAN27G2436 Fragaria x ananassa HOM05D006059 ORTHO05D010613 2.3e-113 412.9 248 83.1
FAN03G3178 Fragaria x ananassa HOM05D006059 ORTHO05D022634 1.7e-103 380.2 298 66.4
FvH4_3g36310 Fragaria vesca HOM05D006059 ORTHO05D000610 1.4e-94 350.5 303 62.7
FvH4_6g48101 Fragaria vesca HOM05D006059 ORTHO05D198592 2.2e-79 300.1 286 58.7
FAN09G3980 Fragaria x ananassa HOM05D006059 ORTHO05D022634 3.7e-79 299.3 297 55.9
FAN19G3119 Fragaria x ananassa HOM05D006059 ORTHO05D022634 3.3e-75 286.2 306 52.6
FAN10G4265 Fragaria x ananassa HOM05D006059 ORTHO05D022634 9.5e-75 284.6 298 52.7
FAN08G3607 Fragaria x ananassa HOM05D006059 ORTHO05D211013 3.7e-71 272.7 154 85.1
FAN05G3551 Fragaria x ananassa HOM05D006059 ORTHO05D202697 1.0e-68 264.6 219 64.4
FAN25G3073 Fragaria x ananassa HOM05D006059 ORTHO05D022634 5.1e-68 262.3 282 53.5
FAN18G3353 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.8e-65 253.8 167 77.2
FAN12G1423 Fragaria x ananassa HOM05D006059 ORTHO05D010613 8.7e-60 235.0 174 73.6
FAN06G2872 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.6e-58 230.7 167 74.9
FAN17G1384 Fragaria x ananassa HOM05D006059 ORTHO05D201010 9.3e-54 214.9 335 44.5
FAN06G2094 Fragaria x ananassa HOM05D006059 ORTHO05D017966 1.7e-52 210.7 99 93.9
FvH4_6g02080 Fragaria vesca HOM05D006059 ORTHO05D022634 4.3e-51 206.1 247 51.0
FAN01G0206 Fragaria x ananassa HOM05D006059 ORTHO05D207853 4.9e-47 192.6 110 82.7
FAN24G2449 Fragaria x ananassa HOM05D006059 ORTHO05D207803 1.6e-45 187.6 147 66.7
FAN05G4414 Fragaria x ananassa HOM05D006059 ORTHO05D200847 2.2e-39 167.2 249 45.4
FAN02G0484 Fragaria x ananassa HOM05D006059 ORTHO05D207202 1.1e-38 164.9 185 55.1
FAN11G1542 Fragaria x ananassa HOM05D006059 ORTHO05D210510 5.1e-36 156.0 100 78.0
FAN18G3497 Fragaria x ananassa HOM05D006059 ORTHO05D017966 3.3e-35 153.3 72 95.8
FAN16G2666 Fragaria x ananassa HOM05D025153 ORTHO05D017966 1.3e-34 151.4 70 97.1
FvH4_6g37922 Fragaria vesca HOM05D006059 ORTHO05D010613 2.1e-34 150.6 167 52.1
FAN08G1991 Fragaria x ananassa HOM05D006059 ORTHO05D208958 6.0e-29 132.5 145 51.0
FvH4_6g18410 Fragaria vesca HOM05D006059 ORTHO05D010613 7.9e-29 132.1 97 71.1
FAN03G1768 Fragaria x ananassa HOM05D006059 ORTHO05D207149 6.7e-28 129.0 264 34.8
FAN03G2752 Fragaria x ananassa HOM05D006059 ORTHO05D010613 3.3e-27 126.7 199 46.2
FAN13G1777 Fragaria x ananassa HOM05D006059 ORTHO05D201876 9.7e-27 125.2 234 40.2
FAN09G0864 Fragaria x ananassa HOM05D006059 ORTHO05D207160 1.6e-26 124.4 224 37.9
FAN14G3214 Fragaria x ananassa HOM05D006059 ORTHO05D010613 2.2e-26 124.0 146 49.3
FAN11G1312 Fragaria x ananassa HOM05D006059 ORTHO05D010613 4.1e-25 119.8 207 47.3
FAN05G2015 Fragaria x ananassa HOM05D006059 ORTHO05D010613 5.3e-25 119.4 205 44.4
FAN09G3528 Fragaria x ananassa HOM05D006059 ORTHO05D010613 6.9e-25 119.0 97 66.0
FvH4_5g18320 Fragaria vesca HOM05D006059 ORTHO05D010613 9.0e-25 118.6 97 66.0
FAN14G0698 Fragaria x ananassa HOM05D006059 ORTHO05D010613 2.0e-24 117.5 97 64.9
FAN02G0790 Fragaria x ananassa HOM05D006059 ORTHO05D010613 2.6e-24 117.1 210 44.3
FAN03G3436 Fragaria x ananassa HOM05D006059 ORTHO05D010613 2.6e-24 117.1 208 43.3
FAN13G2239 Fragaria x ananassa HOM05D006059 ORTHO05D010613 2.6e-24 117.1 210 44.3
FvH4_5g09320 Fragaria vesca HOM05D006059 ORTHO05D010613 4.5e-24 116.3 95 65.3
FAN06G3421 Fragaria x ananassa HOM05D006059 ORTHO05D010613 5.9e-24 115.9 96 64.6
FAN10G3573 Fragaria x ananassa HOM05D006059 ORTHO05D019147 1.0e-23 115.2 184 46.7
FAN14G1746 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.0e-23 115.2 203 38.4
FAN16G0265 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.7e-23 114.4 210 44.3
FAN18G2462 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.7e-23 114.4 96 64.6
FAN01G0864 Fragaria x ananassa HOM05D006059 ORTHO05D019147 2.2e-23 114.0 90 65.6
FAN03G0148 Fragaria x ananassa HOM05D006059 ORTHO05D010613 2.2e-23 114.0 97 63.9
FAN14G3910 Fragaria x ananassa HOM05D006059 ORTHO05D010613 2.2e-23 114.0 97 63.9
FAN16G3677 Fragaria x ananassa HOM05D006059 ORTHO05D010613 8.5e-23 112.1 95 63.2
FAN12G1586 Fragaria x ananassa HOM05D006059 ORTHO05D010613 4.2e-22 109.8 97 62.9
FvH4_5g36190 Fragaria vesca HOM05D006059 ORTHO05D046011 9.4e-22 108.6 162 45.7
FAN12G0752 Fragaria x ananassa HOM05D006059 ORTHO05D204696 3.0e-20 103.6 183 41.5
FAN18G2895 Fragaria x ananassa HOM05D006059 ORTHO05D010613 6.7e-20 102.4 85 64.7
FAN09G3926 Fragaria x ananassa HOM05D006059 ORTHO05D203141 5.7e-19 99.4 153 45.8
FAN25G2292 Fragaria x ananassa HOM05D023658 ORTHO05D017966 1.3e-18 98.2 191 38.7
FAN11G3819 Fragaria x ananassa HOM05D006059 ORTHO05D209325 3.1e-17 93.6 61 73.8
FAN11G2691 Fragaria x ananassa HOM05D006059 ORTHO05D010613 4.1e-17 93.2 204 41.7
FAN14G0874 Fragaria x ananassa HOM05D002480 ORTHO05D003145 4.1e-17 93.2 93 54.8
RcHm_v2.0_Chr5g0057351 Rosa chinensis HOM05D006059 ORTHO05D010613 5.3e-17 92.8 170 37.1
FAN11G0174 Fragaria x ananassa HOM05D023658 ORTHO05D017966 6.9e-17 92.4 74 64.9
RcHm_v2.0_Chr2g0161601 Rosa chinensis HOM05D006059 ORTHO05D010613 6.9e-17 92.4 103 46.6
FAN05G3510 Fragaria x ananassa HOM05D006059 ORTHO05D203405 9.1e-17 92.0 67 71.6
RcHm_v2.0_Chr7g0227101 Rosa chinensis HOM05D006059 ORTHO05D010613 1.2e-16 91.7 96 49.0
FAN09G4197 Fragaria x ananassa HOM05D006059 ORTHO05D210161 2.0e-16 90.9 54 77.8
RcHm_v2.0_Chr6g0279821 Rosa chinensis HOM05D006059 ORTHO05D010613 5.9e-16 89.4 96 46.9
FAN05G3127 Fragaria x ananassa HOM05D006059 ORTHO05D208470 7.7e-16 89.0 207 40.1
FAN06G3136 Fragaria x ananassa HOM05D006059 ORTHO05D202002 1.0e-15 88.6 263 33.1
FvH4_5g36660 Fragaria vesca HOM05D006059 ORTHO05D010613 1.3e-15 88.2 79 62.0
FAN25G1404 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.3e-15 88.2 79 60.8
FAN05G1577 Fragaria x ananassa HOM05D006059 ORTHO05D010613 3.8e-15 86.7 79 62.0
FAN08G2764 Fragaria x ananassa HOM05D006059 ORTHO05D010613 5.0e-15 86.3 79 62.0
FAN13G2711 Fragaria x ananassa HOM05D006059 ORTHO05D010613 5.0e-15 86.3 79 62.0
FAN24G0852 Fragaria x ananassa HOM05D006059 ORTHO05D010613 5.0e-15 86.3 78 61.5
FAN27G3382 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.9e-14 84.3 79 60.8
FAN14G0222 Fragaria x ananassa HOM05D006059 ORTHO05D010613 2.5e-14 84.0 79 60.8
FAN06G3448 Fragaria x ananassa HOM05D006059 ORTHO05D010613 4.2e-14 83.2 79 60.8
FAN10G0384 Fragaria x ananassa HOM05D006059 ORTHO05D010613 4.2e-14 83.2 79 59.5
FAN05G4633 Fragaria x ananassa HOM05D006059 ORTHO05D003448 7.2e-14 82.4 79 60.8
FAN06G3209 Fragaria x ananassa HOM05D006059 ORTHO05D010613 9.4e-14 82.0 79 59.5
FAN12G2113 Fragaria x ananassa HOM05D006059 ORTHO05D004950 9.4e-14 82.0 147 43.5
RcHm_v2.0_Chr2g0116941 Rosa chinensis HOM05D021305 ORTHO05D010102 1.6e-13 81.3 146 41.1
FAN09G4425 Fragaria x ananassa HOM05D006059 ORTHO05D010613 2.1e-13 80.9 74 60.8
FAN10G1186 Fragaria x ananassa HOM05D006059 ORTHO05D010613 2.7e-13 80.5 72 61.1
FAN06G3983 Fragaria x ananassa HOM05D006059 ORTHO05D010613 4.7e-13 79.7 79 59.5
FAN22G1153 Fragaria x ananassa HOM05D023658 ORTHO05D017966 4.7e-13 79.7 91 46.2
FAN14G4965 Fragaria x ananassa HOM05D006059 ORTHO05D010613 7.9e-13 79.0 78 60.3
FAN12G1091 Fragaria x ananassa HOM05D006059 ORTHO05D017966 8.8e-12 75.5 56 69.6
FAN18G4115 Fragaria x ananassa HOM05D005804 ORTHO05D006849 8.8e-12 75.5 94 47.9
FAN14G4872 Fragaria x ananassa HOM05D006059 ORTHO05D010613 2.6e-11 73.9 79 57.0
FAN07G2379 Fragaria x ananassa HOM05D006059 ORTHO05D019147 4.4e-11 73.2 77 53.2
FAN05G2589 Fragaria x ananassa HOM05D000079 ORTHO05D000211 5.7e-11 72.8 47 74.5
FAN10G0957 Fragaria x ananassa HOM05D006059 ORTHO05D010613 5.7e-11 72.8 72 58.3
FAN06G1974 Fragaria x ananassa HOM05D006059 ORTHO05D010613 9.7e-11 72.0 61 62.3
FAN04G2861 Fragaria x ananassa HOM05D006059 ORTHO05D210609 2.2e-10 70.9 45 73.3
FAN28G0623 Fragaria x ananassa HOM05D006059 ORTHO05D010613 1.8e-09 67.8 59 64.4
FAN02G1039 Fragaria x ananassa HOM05D006059 ORTHO05D210069 2.4e-09 67.4 73 54.8
FAN05G0105 Fragaria x ananassa HOM05D006059 ORTHO05D204564 5.3e-09 66.2 46 65.2
FAN24G1658 Fragaria x ananassa HOM05D006059 ORTHO05D209653 7.0e-09 65.9 152 39.5
FAN19G1950 Fragaria x ananassa HOM05D028287 ORTHO05D207148 9.1e-09 65.5 91 40.7
FAN21G0235 Fragaria x ananassa HOM05D006059 ORTHO05D010613 9.1e-09 65.5 158 42.4
RcHm_v2.0_Chr7g0195521 Rosa chinensis HOM05D013926 ORTHO05D020985 1.3e-07 61.6 103 39.8
RcHm_v2.0_Chr2g0175631 Rosa chinensis HOM05D013926 ORTHO05D020985 1.7e-07 61.2 103 39.8
FAN10G1069 Fragaria x ananassa HOM05D033044 ORTHO05D207370 2.2e-07 60.8 50 60.0
RcHm_v2.0_Chr1g0363721 Rosa chinensis HOM05D018137 ORTHO05D343934 3.8e-07 60.1 220 29.1
RcHm_v2.0_Chr4g0388241 Rosa chinensis HOM05D013926 ORTHO05D020985 5.0e-07 59.7 156 32.7
FAN26G1598 Fragaria x ananassa HOM05D006059 ORTHO05D203524 1.1e-06 58.5 44 63.6
RcHm_v2.0_Chr7g0239361 Rosa chinensis HOM05D018137 ORTHO05D340413 1.4e-06 58.2 143 32.9
FAN06G1279 Fragaria x ananassa HOM05D033044 ORTHO05D200869 1.9e-06 57.8 45 60.0
FAN20G0216 Fragaria x ananassa HOM05D006059 ORTHO05D202114 1.9e-06 57.8 46 60.9
FAN14G4559 Fragaria x ananassa HOM05D006059 ORTHO05D209534 3.2e-06 57.0 105 40.0
FAN27G2494 Fragaria x ananassa HOM05D006059 ORTHO05D205312 3.2e-06 57.0 35 71.4
FAN24G2021 Fragaria x ananassa HOM05D023658 ORTHO05D017966 7.2e-06 55.8 81 43.2


User provided reference genes

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