Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G0118 Fragaria x ananassa HOM05D007137 ORTHO05D008982 2.8e-122 441.8 203 100.0
FAN09G1348 Fragaria x ananassa HOM05D007137 ORTHO05D008982 1.9e-70 269.6 130 96.9
FvH4_6g23850 Fragaria vesca HOM05D007137 ORTHO05D008982 6.2e-69 264.6 130 94.6
FAN05G2215 Fragaria x ananassa HOM05D007137 ORTHO05D008982 5.2e-68 261.5 130 94.6
RcHm_v2.0_Chr3g0482531 Rosa chinensis HOM05D007137 ORTHO05D008982 2.1e-64 249.6 130 88.5
Prupe.7G059700 Prunus persica HOM05D007137 ORTHO05D008982 2.0e-59 233.0 130 83.8
MD12G1074200 Malus domestica HOM05D007137 ORTHO05D008982 3.3e-54 215.7 130 77.7
CSS0026997 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 7.3e-54 214.5 130 79.2
Actinidia09328 Actinidia chinensis HOM05D007137 ORTHO05D008982 1.3e-53 213.8 130 76.2
vmacro07849 Vaccinium macrocarpon HOM05D007137 ORTHO05D008982 4.8e-53 211.8 130 74.6
Dinv39605 Davidia involucrata HOM05D007137 ORTHO05D008982 8.1e-53 211.1 130 76.9
Rhsim03G0024800 Rhododendron simsii HOM05D007137 ORTHO05D008982 2.4e-52 209.5 130 75.4
Cfa016812 Carpinus fangiana HOM05D007137 ORTHO05D008982 4.0e-52 208.8 130 76.9
Gohir.D09G118100 Gossypium hirsutum HOM05D007137 ORTHO05D008982 6.9e-52 208.0 130 73.1
Gorai.006G136400 Gossypium raimondii HOM05D007137 ORTHO05D008982 6.9e-52 208.0 130 73.1
Ciclev10005859m.g Citrus clementina HOM05D007137 ORTHO05D008982 1.5e-51 206.8 133 74.4
Rhsim03G0024600 Rhododendron simsii HOM05D007137 ORTHO05D008982 2.0e-51 206.5 130 73.8
TAR369G0818 Trochodendron aralioides HOM05D007137 ORTHO05D008982 2.0e-51 206.5 130 76.2
Thecc.05G153200 Theobroma cacao HOM05D007137 ORTHO05D008982 2.6e-51 206.1 130 73.1
Gohir.A09G122000 Gossypium hirsutum HOM05D007137 ORTHO05D008982 3.4e-51 205.7 130 72.3
TWI74G1615 Tripterygium wilfordii HOM05D007137 ORTHO05D008982 3.4e-51 205.7 130 73.8
Hma1.2p1_2002F.1_g310780 Hydrangea macrophylla HOM05D007137 ORTHO05D008982 4.4e-51 205.3 133 72.9
THA.LOC104818226 Tarenaya hassleriana HOM05D007137 ORTHO05D008982 4.4e-51 205.3 130 71.5
Duzib093G1775 Durio zibethinus HOM05D007137 ORTHO05D008982 1.3e-50 203.8 130 71.5
Thhalv10017217m.g Eutrema salsugineum HOM05D007137 ORTHO05D008982 1.7e-50 203.4 133 70.7
CiPaw.09G038400 Carya illinoinensis HOM05D007137 ORTHO05D008982 2.2e-50 203.0 133 71.4
PGR004G0226 Punica granatum HOM05D007137 ORTHO05D008982 4.9e-50 201.8 130 70.0
AL4G40070 Arabidopsis lyrata HOM05D007137 ORTHO05D008982 1.4e-49 200.3 133 69.9
Oeu008913.1 Olea europaea HOM05D007137 ORTHO05D008982 1.4e-49 200.3 134 71.6
Oeu008915.1 Olea europaea HOM05D007137 ORTHO05D008982 1.4e-49 200.3 134 71.6
MSTRG.6429 Avicennia marina HOM05D007137 ORTHO05D008982 1.9e-49 199.9 130 73.1
Haze_19852 Corylus avellana HOM05D007137 ORTHO05D008982 1.9e-49 199.9 133 72.9
CANSAT80G0539 Cannabis sativa HOM05D007137 ORTHO05D008982 2.4e-49 199.5 130 71.5
CANSAT80G1960 Cannabis sativa HOM05D007137 ORTHO05D008982 2.4e-49 199.5 130 71.5
AUR62026042 Chenopodium quinoa HOM05D007137 ORTHO05D008982 2.4e-49 199.5 130 71.5
Potri.006G051500 Populus trichocarpa HOM05D007137 ORTHO05D008982 2.4e-49 199.5 130 73.1
Sp4g24030 Schrenkiella parvula HOM05D007137 ORTHO05D008982 3.2e-49 199.1 133 70.7
AT2G41760 Arabidopsis thaliana HOM05D007137 ORTHO05D008982 4.2e-49 198.7 133 69.9
CARHR136840 Cardamine hirsuta HOM05D007137 ORTHO05D008982 4.2e-49 198.7 133 69.2
Carub.0004s2404 Capsella rubella HOM05D007137 ORTHO05D008982 9.3e-49 197.6 133 67.7
Lj5g0009390 Lotus japonicus HOM05D007137 ORTHO05D008982 9.3e-49 197.6 131 74.8
Phvul.007G252600 Phaseolus vulgaris HOM05D007137 ORTHO05D008982 9.3e-49 197.6 130 74.6
Nitab4.5_0005195g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 1.2e-48 197.2 133 67.7
AUR62024453 Chenopodium quinoa HOM05D007137 ORTHO05D008982 1.6e-48 196.8 130 70.0
EL10Ac3g07093 Beta vulgaris HOM05D007137 ORTHO05D008982 2.1e-48 196.4 133 67.7
TPR.G10636 Trifolium pratense HOM05D007137 ORTHO05D008982 2.1e-48 196.4 130 72.3
Migut.J01757 Erythranthe guttata HOM05D007137 ORTHO05D008982 2.7e-48 196.1 133 69.9
Nitab4.5_0010636g0030 Nicotiana tabacum HOM05D007137 ORTHO05D008982 2.7e-48 196.1 133 67.7
Solyc04g015760.4 Solanum lycopersicum HOM05D007137 ORTHO05D008982 2.7e-48 196.1 133 66.9
Ca_26019_v3 Cicer arietinum L. HOM05D007137 ORTHO05D008982 3.5e-48 195.7 131 72.5
CsaV3_3G039290 Cucumis sativus L. HOM05D007137 ORTHO05D008982 3.5e-48 195.7 130 70.0
Nn2g15218 Nelumbo nucifera HOM05D007137 ORTHO05D008982 3.5e-48 195.7 130 70.8
Sopen04g007840 Solanum pennellii HOM05D007137 ORTHO05D008982 3.5e-48 195.7 133 66.9
CAN.G1456.1 Capsicum annuum HOM05D007137 ORTHO05D008982 6.0e-48 194.9 130 68.5
Medtr7g034355 Medicago truncatula HOM05D007137 ORTHO05D008982 6.0e-48 194.9 130 71.5
Lalb_Chr21g0316491 Lupinus albus HOM05D007137 ORTHO05D008982 7.9e-48 194.5 133 67.7
Psat6g120120 Pisum sativum HOM05D007137 ORTHO05D008982 1.0e-47 194.1 130 73.1
Peaxi162Scf00130g00019 Petunia axillaris HOM05D007137 ORTHO05D008982 2.3e-47 193.0 130 68.5
QL07p000577 Quercus lobata HOM05D007137 ORTHO05D008982 2.3e-47 193.0 133 69.2
PGSC0003DMG400027277 Solanum tuberosum HOM05D007137 ORTHO05D008982 2.3e-47 193.0 133 66.9
GSVIVG01033260001 Vitis vinifera HOM05D007137 ORTHO05D008982 2.3e-47 193.0 130 66.9
C03p27930 Brassica napus HOM05D007137 ORTHO05D008982 3.0e-47 192.6 141 64.5
Cc06_g17570 Coffea canephora HOM05D007137 ORTHO05D008982 3.0e-47 192.6 137 67.2
MELO3C009672.2 Cucumis melo HOM05D007137 ORTHO05D008982 3.0e-47 192.6 130 69.2
Glyma.10G097900 Glycine max HOM05D007137 ORTHO05D008982 3.0e-47 192.6 130 70.8
Aqoxy1G00329 Aquilegia oxysepala HOM05D007137 ORTHO05D008982 5.1e-47 191.8 135 64.4
A03p23410 Brassica napus HOM05D007137 ORTHO05D008982 5.1e-47 191.8 147 62.6
BraA03t11558Z Brassica rapa HOM05D007137 ORTHO05D008982 5.1e-47 191.8 147 62.6
Sc13g0001720 Simmondsia chinensis HOM05D007137 ORTHO05D008982 8.7e-47 191.0 130 70.0
Atru.BG.154.p Acer truncatum HOM05D007137 ORTHO05D008982 5.6e-46 188.3 145 67.6
Sed0021909 Sechium edule HOM05D007137 ORTHO05D008982 5.6e-46 188.3 130 67.7
BolC3t15165H Brassica oleracea HOM05D007137 ORTHO05D008982 7.3e-46 188.0 153 59.5
Hund24707 Selenicereus undatus HOM05D007137 ORTHO05D008982 7.3e-46 188.0 133 67.7
Lsat_1_v5_gn_9_29000 Lactuca sativa HOM05D007137 ORTHO05D008982 9.6e-46 187.6 130 69.2
HanXRQChr15g0491151 Helianthus annuus HOM05D007137 ORTHO05D008982 2.1e-45 186.4 130 69.2
ECA247G4023 Erigeron canadensis HOM05D007137 ORTHO05D008982 8.1e-45 184.5 130 66.9
PSO384G0937 Papaver somniferum HOM05D007137 ORTHO05D008982 4.0e-44 182.2 130 68.5
Eucgr.A02346 Eucalyptus grandis HOM05D007137 ORTHO05D008982 5.3e-44 181.8 133 64.7
CAN.G676.70 Capsicum annuum HOM05D007137 ORTHO05D008982 3.2e-41 172.6 127 63.8
arahy.Tifrunner.gnm1.ann1.F03MXT Arachis hypogaea HOM05D007137 ORTHO05D008982 4.2e-41 172.2 130 66.2
Ah.04g151610 Amaranthus hybridus HOM05D000942 ORTHO05D000918 5.5e-41 171.8 130 62.3
Sabra06G0036100 Salix brachista HOM05D007137 ORTHO05D008982 9.3e-41 171.0 130 64.6
arahy.Tifrunner.gnm1.ann1.QC7DP1 Arachis hypogaea HOM05D007137 ORTHO05D008982 1.6e-40 170.2 130 65.4
Os05g0387900 Oryza sativa ssp. japonica HOM05D007137 ORTHO05D008982 8.7e-39 164.5 133 56.4
Hma1.2p1_2520F.1_g323835 Hydrangea macrophylla HOM05D007137 ORTHO05D008982 4.3e-38 162.2 108 71.3
HPP92_001018 Vanilla planifolia HOM05D007137 ORTHO05D008982 1.3e-37 160.6 131 56.5
Lju124C41G12 Lonicera japonica HOM05D007137 ORTHO05D008982 1.8e-36 156.8 122 63.1
CSS0041211 Camellia sinensis var. sinensis HOM05D007137 ORTHO05D008982 5.3e-36 155.2 116 65.5
ATR0320G015 Amborella trichopoda HOM05D007137 ORTHO05D008982 3.4e-35 152.5 130 56.2
CDE02G1742 Ceratophyllum demersum HOM05D007137 ORTHO05D008982 3.4e-35 152.5 130 55.4
SGA_v2.0_scaffold105G30410 Striga asiatica HOM05D007137 ORTHO05D008982 4.5e-35 152.1 130 56.9
Aa31LG1G23770 Aethionema arabicum HOM05D007137 ORTHO05D008982 7.6e-35 151.4 107 66.4
Cpa.g.sc92.53 Carica papaya HOM05D007137 ORTHO05D008982 1.0e-34 151.0 106 67.0
DCAR_020492 Daucus carota HOM05D007137 ORTHO05D008982 1.2e-32 144.1 96 72.9
SalBow6G6768 Salvia bowleyana HOM05D007137 ORTHO05D008982 1.6e-32 143.7 149 53.0
MBI17_g01631_MAGBIO Magnolia biondii HOM05D007137 ORTHO05D008982 2.1e-32 143.3 130 58.5
Mapoly0062s0037 Marchantia polymorpha HOM05D007137 ORTHO05D008982 1.3e-31 140.6 131 51.9
Manes.09G022100 Manihot esculenta HOM05D007137 ORTHO05D008982 4.3e-30 135.6 130 56.2
SMO353G0157 Selaginella moellendorffii HOM05D007137 ORTHO05D008982 5.9e-27 125.2 132 50.8
Pp3c8_16370 Physcomitrium patens HOM05D007137 ORTHO05D008982 7.6e-27 124.8 125 48.8
SMO302G0006 Selaginella moellendorffii HOM05D007137 ORTHO05D008982 2.9e-26 122.9 144 47.2
ClCG10G017100 Citrullus lanatus HOM05D007137 ORTHO05D008982 3.2e-25 119.4 151 45.0
Zm00001eb286980 Zea mays HOM05D007137 ORTHO05D008982 5.9e-19 98.6 63 63.5
CBR_g39180 Chara braunii HOM05D007137 ORTHO05D008982 2.3e-15 86.7 71 49.3
Cre04.g217912 Chlamydomonas reinhardtii HOM05D007137 ORTHO05D008982 1.6e-08 63.9 67 44.8
Rhsim03G0024200 Rhododendron simsii HOM05D007137 ORTHO05D008982 9.7e-06 54.7 96 35.4


User provided reference genes

Program Settings