Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN02G0014 Fragaria x ananassa HOM05D006205 ORTHO05D007703 5.7e-211 737.3 356 100.0
FvH4_6g22800 Fragaria vesca HOM05D006205 ORTHO05D007703 1.8e-209 732.3 356 98.9
FAN14G5729 Fragaria x ananassa HOM05D006205 ORTHO05D007703 1.8e-209 732.3 356 98.9
FAN05G5560 Fragaria x ananassa HOM05D006205 ORTHO05D007703 2.2e-207 725.3 356 98.3
RcHm_v2.0_Chr3g0480421 Rosa chinensis HOM05D006205 ORTHO05D007703 4.0e-204 714.5 356 96.6
Prupe.7G072500 Prunus persica HOM05D006205 ORTHO05D007703 2.3e-191 672.2 360 89.4
PGR142G1368 Punica granatum HOM05D006205 ORTHO05D007703 3.3e-190 668.3 360 86.9
Manes.09G031300 Manihot esculenta HOM05D006205 ORTHO05D007703 2.1e-189 665.6 360 87.5
Thecc.05G167100 Theobroma cacao HOM05D006205 ORTHO05D007703 8.0e-189 663.7 360 88.1
Gohir.A01G194800 Gossypium hirsutum HOM05D006205 ORTHO05D007703 1.4e-188 662.9 360 86.9
Gorai.002G228500 Gossypium raimondii HOM05D006205 ORTHO05D007703 1.4e-188 662.9 360 86.9
Duzib106G0917 Durio zibethinus HOM05D006205 ORTHO05D007703 5.2e-188 661.0 360 87.5
CSS0013544 Camellia sinensis var. sinensis HOM05D006205 ORTHO05D007703 8.9e-188 660.2 360 86.7
Ca_08497_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 8.9e-188 660.2 360 86.9
Ca_29722_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 8.9e-188 660.2 360 86.9
Actinidia17259 Actinidia chinensis HOM05D006205 ORTHO05D007703 1.2e-187 659.8 360 86.9
Lju124A32T75 Lonicera japonica HOM05D006205 ORTHO05D007703 1.2e-187 659.8 360 86.7
Eucgr.K01821 Eucalyptus grandis HOM05D006205 ORTHO05D007703 4.4e-187 657.9 360 85.8
Haze_19942 Corylus avellana HOM05D006205 ORTHO05D007703 7.5e-187 657.1 356 87.6
Gohir.D01G185000 Gossypium hirsutum HOM05D006205 ORTHO05D007703 1.3e-186 656.4 360 86.4
QL07p022686 Quercus lobata HOM05D006205 ORTHO05D007703 2.8e-186 655.2 358 87.7
Dinv24098 Davidia involucrata HOM05D006205 ORTHO05D007703 6.3e-186 654.1 360 85.6
Lalb_Chr18g0047621 Lupinus albus HOM05D006205 ORTHO05D007703 6.3e-186 654.1 359 86.4
TPR.G4691 Trifolium pratense HOM05D006205 ORTHO05D007703 1.1e-185 653.3 360 85.8
Duzib093G1988 Durio zibethinus HOM05D006205 ORTHO05D007703 1.8e-185 652.5 360 85.8
Potri.016G049700 Populus trichocarpa HOM05D006205 ORTHO05D007703 1.8e-185 652.5 360 85.3
CiPaw.09G032800 Carya illinoinensis HOM05D006205 ORTHO05D007703 3.2e-185 651.7 358 86.6
Psat3g069960 Pisum sativum HOM05D006205 ORTHO05D007703 3.2e-185 651.7 361 86.4
Nitab4.5_0006846g0010 Nicotiana tabacum HOM05D006205 ORTHO05D007703 9.2e-185 650.2 360 85.6
Ciclev10031918m.g Citrus clementina HOM05D006205 ORTHO05D007703 1.2e-184 649.8 358 86.0
Hund19180 Selenicereus undatus HOM05D006205 ORTHO05D007703 1.2e-184 649.8 360 85.3
Lsat_1_v5_gn_8_79241 Lactuca sativa HOM05D006205 ORTHO05D007703 1.6e-184 649.4 360 85.0
Potri.006G058400 Populus trichocarpa HOM05D006205 ORTHO05D007703 1.6e-184 649.4 360 85.0
TAR623G1003 Trochodendron aralioides HOM05D006205 ORTHO05D007703 1.6e-184 649.4 360 85.6
MSTRG.26097 Avicennia marina HOM05D006205 ORTHO05D007703 2.0e-184 649.0 360 85.3
Glyma.19G144900 Glycine max HOM05D006205 ORTHO05D007703 2.7e-184 648.7 356 87.1
Sabra06G0041700 Salix brachista HOM05D006205 ORTHO05D007703 1.3e-183 646.4 360 84.7
arahy.Tifrunner.gnm1.ann1.ARGW3J Arachis hypogaea HOM05D006205 ORTHO05D007703 1.7e-183 646.0 357 85.7
Sabra16G0053600 Salix brachista HOM05D006205 ORTHO05D007703 1.7e-183 646.0 356 85.1
Phvul.001G139800 Phaseolus vulgaris HOM05D006205 ORTHO05D007703 2.3e-183 645.6 360 84.7
SGA_v2.0_scaffold94G28443 Striga asiatica HOM05D006205 ORTHO05D007703 2.9e-183 645.2 361 84.5
arahy.Tifrunner.gnm1.ann1.68EW5P Arachis hypogaea HOM05D006205 ORTHO05D007703 3.9e-183 644.8 357 85.4
VMungo1383G0076 Vigna mungo HOM05D006205 ORTHO05D007703 5.0e-183 644.4 360 83.9
Hma1.2p1_1575F.1_g291620 Hydrangea macrophylla HOM05D006205 ORTHO05D007703 6.6e-183 644.0 358 84.1
THA.LOC104809921 Tarenaya hassleriana HOM05D006205 ORTHO05D007703 8.6e-183 643.7 357 84.6
CAN.G85.9 Capsicum annuum HOM05D006205 ORTHO05D007703 1.1e-182 643.3 360 85.3
Cpa.g.sc85.111 Carica papaya HOM05D006205 ORTHO05D007703 2.5e-182 642.1 360 85.8
DCAR_013564 Daucus carota HOM05D006205 ORTHO05D007703 3.3e-182 641.7 353 85.6
Medtr7g092680 Medicago truncatula HOM05D006205 ORTHO05D007703 3.6e-181 638.3 360 84.4
Nn2g15532 Nelumbo nucifera HOM05D006205 ORTHO05D007703 1.0e-180 636.7 358 85.2
Sc25g0005160 Simmondsia chinensis HOM05D006205 ORTHO05D007703 1.4e-180 636.3 358 83.0
AL3G23830 Arabidopsis lyrata HOM05D006205 ORTHO05D007703 1.8e-180 636.0 358 83.8
Lj1g0022121 Lotus japonicus HOM05D006205 ORTHO05D007703 1.8e-180 636.0 395 79.0
Sed0025317 Sechium edule HOM05D006205 ORTHO05D007703 2.3e-180 635.6 360 83.9
Carub.0003s1152 Capsella rubella HOM05D006205 ORTHO05D007703 5.2e-180 634.4 355 84.8
AUR62024356 Chenopodium quinoa HOM05D006205 ORTHO05D007703 5.2e-180 634.4 357 83.8
CANSAT64G2514 Cannabis sativa HOM05D006205 ORTHO05D007703 6.8e-180 634.0 356 84.6
PGSC0003DMG400012937 Solanum tuberosum HOM05D006205 ORTHO05D007703 8.9e-180 633.6 360 82.8
MELO3C009648.2 Cucumis melo HOM05D006205 ORTHO05D007703 3.4e-179 631.7 382 80.4
AT3G12150 Arabidopsis thaliana HOM05D006205 ORTHO05D007703 5.8e-179 630.9 358 82.7
HanXRQChr05g0132791 Helianthus annuus HOM05D006205 ORTHO05D007703 7.5e-179 630.6 356 82.3
EL10Ac3g06974 Beta vulgaris HOM05D006205 ORTHO05D007703 1.3e-178 629.8 360 82.5
vmacro09103 Vaccinium macrocarpon HOM05D006205 ORTHO05D007703 1.3e-178 629.8 370 81.9
QL93p2022_0017 Quercus lobata HOM05D006205 ORTHO05D007703 2.9e-178 628.6 416 75.5
Sp3g10390 Schrenkiella parvula HOM05D006205 ORTHO05D007703 6.4e-178 627.5 358 82.4
Cc06_g16310 Coffea canephora HOM05D006205 ORTHO05D007703 8.3e-178 627.1 358 82.1
Aqoxy1G00212 Aquilegia oxysepala HOM05D006205 ORTHO05D007703 1.4e-177 626.3 360 81.7
Migut.K00057 Erythranthe guttata HOM05D006205 ORTHO05D007703 4.1e-177 624.8 360 81.9
SalBow1G2518 Salvia bowleyana HOM05D006205 ORTHO05D007703 7.0e-177 624.0 400 76.2
Thhalv10021002m.g Eutrema salsugineum HOM05D006205 ORTHO05D007703 2.7e-176 622.1 358 81.8
Solyc03g064030.3 Solanum lycopersicum HOM05D006205 ORTHO05D007703 3.5e-176 621.7 360 81.9
A05p37150 Brassica napus HOM05D006205 ORTHO05D007703 6.0e-176 620.9 358 81.3
C05p55580 Brassica napus HOM05D006205 ORTHO05D007703 6.0e-176 620.9 358 81.3
BolC5t34227H Brassica oleracea HOM05D006205 ORTHO05D007703 6.0e-176 620.9 358 81.3
BcaC05g29277 Brassica carinata HOM05D006205 ORTHO05D007703 7.8e-176 620.5 358 81.0
Sopen03g017680 Solanum pennellii HOM05D006205 ORTHO05D007703 1.7e-175 619.4 360 81.1
BraA05t22513Z Brassica rapa HOM05D006205 ORTHO05D007703 3.9e-175 618.2 358 80.7
AUR62025960 Chenopodium quinoa HOM05D006205 ORTHO05D007703 6.6e-175 617.5 357 82.6
Aa31LG3G6360 Aethionema arabicum HOM05D006205 ORTHO05D007703 1.1e-174 616.7 386 76.4
ClCG10G017350 Citrullus lanatus HOM05D006205 ORTHO05D007703 1.2e-173 613.2 427 71.7
TWI74G1063 Tripterygium wilfordii HOM05D006205 ORTHO05D007703 2.8e-173 612.1 338 85.2
PSO384G4504 Papaver somniferum HOM05D006205 ORTHO05D007703 1.8e-172 609.4 356 79.5
BcaC01g04062 Brassica carinata HOM05D006205 ORTHO05D007703 6.8e-172 607.4 359 80.2
C03p45470 Brassica napus HOM05D006205 ORTHO05D007703 2.0e-171 605.9 361 79.8
BraA03t12906Z Brassica rapa HOM05D006205 ORTHO05D007703 4.4e-171 604.7 359 79.7
A03p37470 Brassica napus HOM05D006205 ORTHO05D007703 5.8e-171 604.4 359 79.7
BolC3t16816H Brassica oleracea HOM05D006205 ORTHO05D007703 5.8e-171 604.4 361 79.5
PSO339G0108 Papaver somniferum HOM05D006205 ORTHO05D007703 5.8e-171 604.4 357 78.7
ATR0605G163 Amborella trichopoda HOM05D006205 ORTHO05D007703 7.5e-171 604.0 355 80.3
CDE10G0043 Ceratophyllum demersum HOM05D006205 ORTHO05D007703 3.0e-167 592.0 348 78.7
GSVIVG01033369001 Vitis vinifera HOM05D006205 ORTHO05D007703 1.1e-166 590.1 314 90.1
unitig_899.g15081 Utricularia gibba HOM05D006205 ORTHO05D007703 9.5e-166 587.0 358 78.5
Os02g0195000 Oryza sativa ssp. japonica HOM05D006205 ORTHO05D007703 1.2e-163 580.1 365 73.2
Zm00001eb236370 Zea mays HOM05D006205 ORTHO05D007703 4.4e-163 578.2 365 73.2
SEGI_33856 Sequoiadendron giganteum HOM05D006205 ORTHO05D007703 3.3e-158 562.0 355 74.1
Nitab4.5_0000016g0140 Nicotiana tabacum HOM05D006205 ORTHO05D007703 2.0e-155 552.7 360 75.3
BcaB04g18694 Brassica carinata HOM05D006205 ORTHO05D007703 3.4e-155 552.0 336 78.0
MD12G1062300 Malus domestica HOM05D006205 ORTHO05D007703 7.6e-155 550.8 305 88.2
ECA236G0538 Erigeron canadensis HOM05D006205 ORTHO05D007703 1.3e-154 550.1 311 83.6
Cfa016888 Carpinus fangiana HOM05D006205 ORTHO05D007703 2.1e-152 542.7 301 86.7
Mapoly0096s0035 Marchantia polymorpha HOM05D006205 ORTHO05D007703 6.4e-146 521.2 356 69.1
Ah.13g076130 Amaranthus hybridus HOM05D006205 ORTHO05D007703 1.6e-144 516.5 362 71.5
SMO334G0020 Selaginella moellendorffii HOM05D006205 ORTHO05D007703 2.7e-144 515.8 353 69.7
Rhsim04G0098500 Rhododendron simsii HOM05D006205 ORTHO05D007703 2.0e-139 499.6 402 63.9
AagrBONN_evm.TU.Sc2ySwM_228.3151 Anthoceros agrestis HOM05D006205 ORTHO05D007703 7.6e-139 497.7 357 67.8
Pp3c3_27370 Physcomitrium patens HOM05D006205 ORTHO05D007703 2.9e-138 495.7 355 65.6
CsaV3_3G039050 Cucumis sativus L. HOM05D006205 ORTHO05D007703 4.2e-129 465.3 253 88.9
SalBow1G2557 Salvia bowleyana HOM05D006205 ORTHO05D007703 1.3e-127 460.3 364 65.4
CBR_g25855 Chara braunii HOM05D006205 ORTHO05D007703 3.9e-127 458.8 362 61.9
Peaxi162Scf00285g00443 Petunia axillaris HOM05D006205 ORTHO05D007703 3.9e-127 458.8 360 65.6
COL.COLO4_36119 Corchorus olitorius HOM05D006205 ORTHO05D007703 5.7e-126 454.9 241 91.7
HPP92_023778 Vanilla planifolia HOM05D006205 ORTHO05D007703 1.4e-113 413.7 238 82.8
Dinv18116 Davidia involucrata HOM05D006205 ORTHO05D007703 3.2e-105 386.0 206 86.9
CARHR086730 Cardamine hirsuta HOM05D006205 ORTHO05D007703 2.2e-101 373.2 205 86.8
Glyma.02G176500 Glycine max HOM05D006205 ORTHO05D007703 2.3e-74 283.5 184 77.7
MBI04_g47239_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 1.6e-64 250.8 151 74.2
MD14G1062900 Malus domestica HOM05D006205 ORTHO05D007703 3.5e-59 233.0 125 86.4
MBI04_g14269_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 1.9e-57 227.3 153 68.6
Actinidia33641 Actinidia chinensis HOM05D006205 ORTHO05D007703 6.2e-56 222.2 119 83.2
Cre02.g076150 Chlamydomonas reinhardtii HOM05D006205 ORTHO05D007703 1.1e-49 201.4 322 39.1
MD14G1062700 Malus domestica HOM05D006205 ORTHO05D007703 4.7e-48 196.1 203 54.2
VMungo1080G0431 Vigna mungo HOM05D006205 ORTHO05D007703 2.0e-38 164.1 98 82.7
arahy.Tifrunner.gnm1.ann1.EV0IJD Arachis hypogaea HOM05D006205 ORTHO05D007703 4.6e-35 152.9 117 68.4
MD12G1062200 Malus domestica HOM05D006205 ORTHO05D007703 7.9e-27 125.6 59 94.9
VMungo0331G0486 Vigna mungo HOM05D006205 ORTHO05D007703 2.0e-22 110.9 111 55.9
Medtr0001s0010 Medicago truncatula HOM05D006205 ORTHO05D007703 2.1e-19 100.9 79 65.8
Rhsim04G0098400 Rhododendron simsii HOM05D000259 ORTHO05D000155 2.6e-14 84.0 37 94.6
BcaC01g04094 Brassica carinata HOM05D001227 ORTHO05D001082 6.5e-13 79.3 162 35.8
Glyma.02G176400 Glycine max HOM05D006205 ORTHO05D007703 5.5e-12 76.3 50 64.0
MCO07G325 Micromonas commoda HOM05D006205 ORTHO05D007703 7.9e-11 72.4 290 26.6


User provided reference genes

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