Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN01G3115 Fragaria x ananassa HOM05D018527 ORTHO05D005258 0.0e+00 1255.7 646 100.0
FAN10G3179 Fragaria x ananassa HOM05D018527 ORTHO05D005258 4.1e-308 1060.8 633 87.4
FvH4_7g08730 Fragaria vesca HOM05D018527 ORTHO05D029570 2.1e-62 244.6 177 82.5
RcHm_v2.0_Chr7g0228051 Rosa chinensis HOM05D004557 ORTHO05D005258 1.2e-54 218.8 358 40.2
FAN13G2684 Fragaria x ananassa HOM05D004557 ORTHO05D005258 9.8e-52 209.1 356 38.8
FAN08G0395 Fragaria x ananassa HOM05D004557 ORTHO05D005258 1.1e-50 205.7 356 38.2
FAN18G0835 Fragaria x ananassa HOM05D004557 ORTHO05D005258 7.8e-49 199.5 276 43.5
FvH4_5g32040 Fragaria vesca HOM05D004557 ORTHO05D005258 3.0e-48 197.6 276 43.1
FAN04G2671 Fragaria x ananassa HOM05D004557 ORTHO05D005258 1.9e-47 194.9 273 43.2
FAN10G3186 Fragaria x ananassa HOM05D018527 ORTHO05D005258 2.1e-46 191.4 189 62.4
FAN06G3367 Fragaria x ananassa HOM05D004557 ORTHO05D005258 1.1e-42 179.1 368 35.9
FAN03G1775 Fragaria x ananassa HOM05D018527 ORTHO05D029570 1.9e-39 168.3 114 86.0
FAN03G2035 Fragaria x ananassa HOM05D018527 ORTHO05D029570 1.9e-39 168.3 114 86.0
FAN06G0221 Fragaria x ananassa HOM05D018527 ORTHO05D029570 2.1e-30 138.3 94 87.2
FAN10G1667 Fragaria x ananassa HOM05D004557 ORTHO05D005258 3.2e-26 124.4 344 30.8
Prupe.1G406500 Prunus persica HOM05D004557 ORTHO05D005258 3.9e-24 117.5 308 32.1
MD08G1069500 Malus domestica HOM05D004557 ORTHO05D005258 5.1e-24 117.1 355 29.6
MD15G1052600 Malus domestica HOM05D004557 ORTHO05D005258 1.2e-22 112.5 355 27.9
CiPaw.09G214400 Carya illinoinensis HOM05D004557 ORTHO05D005258 6.2e-22 110.2 272 32.0
CANSAT21G2041 Cannabis sativa HOM05D004557 ORTHO05D005258 3.1e-21 107.8 282 28.0
QL02p000341 Quercus lobata HOM05D004557 ORTHO05D005258 1.5e-20 105.5 271 29.5
Potri.006G223100 Populus trichocarpa HOM05D004557 ORTHO05D005258 3.4e-20 104.4 227 33.9
Sabra06G0172400 Salix brachista HOM05D004557 ORTHO05D005258 9.9e-20 102.8 226 35.4
Dinv29489 Davidia involucrata HOM05D004557 ORTHO05D005258 2.2e-19 101.7 310 28.4
Lalb_Chr19g0132651 Lupinus albus HOM05D004557 ORTHO05D005258 4.9e-19 100.5 291 28.5
Cfa018005 Carpinus fangiana HOM05D004557 ORTHO05D005258 6.4e-19 100.1 293 29.7
CiPaw.15G090600 Carya illinoinensis HOM05D004557 ORTHO05D005258 8.4e-19 99.8 273 29.7
Dinv06254 Davidia involucrata HOM05D004557 ORTHO05D005258 1.9e-18 98.6 302 29.1
Dinv15528 Davidia involucrata HOM05D004557 ORTHO05D005258 1.9e-18 98.6 302 29.1
CiPaw.15G089600 Carya illinoinensis HOM05D004557 ORTHO05D005258 2.4e-18 98.2 273 29.3
CiPaw.15G089700 Carya illinoinensis HOM05D004557 ORTHO05D005258 2.4e-18 98.2 273 29.3
Lalb_Chr08g0244871 Lupinus albus HOM05D004557 ORTHO05D005258 5.4e-18 97.1 251 31.1
HanXRQChr09g0248091 Helianthus annuus HOM05D004557 ORTHO05D005258 9.3e-18 96.3 266 28.2
Thecc.03G250200 Theobroma cacao HOM05D004557 ORTHO05D005258 9.3e-18 96.3 231 31.6
Cpa.g.sc126.43 Carica papaya HOM05D004557 ORTHO05D005258 1.6e-17 95.5 273 31.9
TAR383G0817 Trochodendron aralioides HOM05D004557 ORTHO05D005258 1.6e-17 95.5 264 31.8
Rhsim01G0109000 Rhododendron simsii HOM05D004557 ORTHO05D005258 2.1e-17 95.1 300 27.0
Atru.chr7.1871 Acer truncatum HOM05D004557 ORTHO05D005258 6.0e-17 93.6 298 26.8
Lj1g0020695 Lotus japonicus HOM05D004557 ORTHO05D005258 6.0e-17 93.6 274 28.1
Actinidia25701 Actinidia chinensis HOM05D004557 ORTHO05D005258 1.0e-16 92.8 263 29.7
Psat5g030600 Pisum sativum HOM05D004557 ORTHO05D005258 1.7e-16 92.0 273 30.8
CiPaw.15G090500 Carya illinoinensis HOM05D004557 ORTHO05D005258 2.3e-16 91.7 273 28.6
SGA_v2.0_scaffold20G09180 Striga asiatica HOM05D004557 ORTHO05D005258 8.7e-16 89.7 289 26.6
Aqoxy7G01097 Aquilegia oxysepala HOM05D004557 ORTHO05D005258 1.1e-15 89.4 277 30.0
Hma1.2p1_0231F.1_g097480 Hydrangea macrophylla HOM05D004557 ORTHO05D005258 1.9e-15 88.6 302 27.2
arahy.Tifrunner.gnm1.ann1.50HX4L Arachis hypogaea HOM05D004557 ORTHO05D005258 2.5e-15 88.2 240 28.3
Nn5g28590 Nelumbo nucifera HOM05D004557 ORTHO05D005258 2.5e-15 88.2 269 29.0
Lsat_1_v5_gn_7_60080 Lactuca sativa HOM05D004557 ORTHO05D005258 5.6e-15 87.0 261 27.2
Ca_15841_v3 Cicer arietinum L. HOM05D002542 ORTHO05D010145 1.3e-14 85.9 259 29.3
Manes.03G052300 Manihot esculenta HOM05D004557 ORTHO05D005258 3.6e-14 84.3 118 39.0
CSS0012791 Camellia sinensis var. sinensis HOM05D004557 ORTHO05D005258 6.2e-14 83.6 258 27.9
ClCG08G009910 Citrullus lanatus HOM05D004557 ORTHO05D005258 8.1e-14 83.2 274 30.3
Sed0027657 Sechium edule HOM05D004557 ORTHO05D005258 8.1e-14 83.2 300 29.3
arahy.Tifrunner.gnm1.ann1.R4HSFZ Arachis hypogaea HOM05D004557 ORTHO05D005258 1.1e-13 82.8 240 27.1
Psat7g051600 Pisum sativum HOM05D004557 ORTHO05D005258 1.8e-13 82.0 285 27.0
CsaV3_6G032010 Cucumis sativus L. HOM05D004557 ORTHO05D005258 6.9e-13 80.1 272 29.0
PSO210G7071 Papaver somniferum HOM05D004557 ORTHO05D005258 1.5e-12 79.0 90 43.3
TPR.G3531 Trifolium pratense HOM05D004557 ORTHO05D005258 2.6e-12 78.2 270 27.4
FvH4_7g07010 Fragaria vesca HOM05D004557 ORTHO05D005258 3.4e-12 77.8 120 42.5
PSO388G0001 Papaver somniferum HOM05D004557 ORTHO05D005258 3.4e-12 77.8 144 33.3
Gohir.D08G188200 Gossypium hirsutum HOM05D004557 ORTHO05D005258 4.5e-12 77.4 259 27.0
MELO3C011480.2 Cucumis melo HOM05D004557 ORTHO05D005258 5.8e-12 77.0 274 28.5
ECA240G2282 Erigeron canadensis HOM05D004557 ORTHO05D005258 9.9e-12 76.3 134 34.3
Medtr3g104830 Medicago truncatula HOM05D004557 ORTHO05D005258 1.3e-11 75.9 284 28.2
Lj7A235T21 Lonicera japonica HOM05D004557 ORTHO05D005258 1.7e-11 75.5 119 37.0
Oeu037989.1 Olea europaea HOM05D004557 ORTHO05D005258 3.8e-11 74.3 123 34.1
Rhsim09G0050500 Rhododendron simsii HOM05D004557 ORTHO05D005258 3.8e-11 74.3 167 29.9
Gorai.004G198100 Gossypium raimondii HOM05D004557 ORTHO05D005258 4.9e-11 73.9 269 26.8
Glyma.20G016400 Glycine max HOM05D004557 ORTHO05D005258 6.4e-11 73.6 311 27.0
vmacro20759 Vaccinium macrocarpon HOM05D004557 ORTHO05D005258 6.4e-11 73.6 256 29.3
COL.COLO4_37167 Corchorus olitorius HOM05D004557 ORTHO05D005258 8.4e-11 73.2 132 34.1
Glyma.06G198300 Glycine max HOM05D004557 ORTHO05D005258 1.1e-10 72.8 262 29.0
ClCG05G018170 Citrullus lanatus HOM05D004557 ORTHO05D005258 4.2e-10 70.9 270 26.3
SGA_v2.0_scaffold64G21858 Striga asiatica HOM05D000448 ORTHO05D000291 4.2e-10 70.9 101 37.6
Nitab4.5_0004953g0040 Nicotiana tabacum HOM05D002542 ORTHO05D010145 7.1e-10 70.1 265 26.8
TWI34G1499 Tripterygium wilfordii HOM05D004557 ORTHO05D005258 9.3e-10 69.7 104 34.6
Sed0013662 Sechium edule HOM05D004557 ORTHO05D005258 1.6e-09 68.9 276 25.4
THA.LOC104827156 Tarenaya hassleriana HOM05D004557 ORTHO05D005258 4.6e-09 67.4 221 26.7
Nn6g35588 Nelumbo nucifera HOM05D004557 ORTHO05D005258 7.9e-09 66.6 119 31.9
Cc08_g01350 Coffea canephora HOM05D004557 ORTHO05D005258 1.0e-08 66.2 319 24.1
Migut.B01423 Erythranthe guttata HOM05D004557 ORTHO05D005258 1.8e-08 65.5 247 26.7
SalBow5G2684 Salvia bowleyana HOM05D004557 ORTHO05D005258 2.3e-08 65.1 221 26.7
CAN.G1245.2 Capsicum annuum HOM05D004557 ORTHO05D005258 6.7e-08 63.5 216 24.5
Duzib084G1100 Durio zibethinus HOM05D006762 ORTHO05D003505 6.7e-08 63.5 85 40.0
A10p22940 Brassica napus HOM05D004557 ORTHO05D005258 8.7e-08 63.2 269 25.7
BraA10t44362Z Brassica rapa HOM05D004557 ORTHO05D005258 8.7e-08 63.2 269 25.7
C09p60890 Brassica napus HOM05D004557 ORTHO05D005258 1.5e-07 62.4 269 25.3
BolC9t58932H Brassica oleracea HOM05D004557 ORTHO05D005258 1.5e-07 62.4 269 25.3
VMungo1309G0311 Vigna mungo HOM05D004557 ORTHO05D005258 1.5e-07 62.4 258 25.6
VMungo1309G1176 Vigna mungo HOM05D004557 ORTHO05D005258 9.6e-07 59.7 281 22.8
Thhalv10013525m.g Eutrema salsugineum HOM05D004557 ORTHO05D005258 1.3e-06 59.3 219 24.7
Glyma.20G016500 Glycine max HOM05D004557 ORTHO05D005258 1.3e-06 59.3 170 30.6
Zm00001eb133740 Zea mays HOM05D004557 ORTHO05D005258 1.3e-06 59.3 231 28.6
Haze_18125 Corylus avellana HOM05D004557 ORTHO05D005258 1.6e-06 58.9 213 26.8
CDE05G1912 Ceratophyllum demersum HOM05D004557 ORTHO05D005258 2.1e-06 58.5 271 23.6
DCAR_004389 Daucus carota HOM05D004557 ORTHO05D005258 2.8e-06 58.2 187 28.9
Eucgr.I02597 Eucalyptus grandis HOM05D004557 ORTHO05D005258 2.8e-06 58.2 89 37.1
unitig_26.g8849 Utricularia gibba HOM05D004557 ORTHO05D005258 4.8e-06 57.4 222 23.4
SGA_v2.0_scaffold98G29377 Striga asiatica HOM05D004557 ORTHO05D005258 8.1e-06 56.6 160 30.0


User provided reference genes

Program Settings