Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN01G2912 Fragaria x ananassa HOM05D009879 ORTHO05D009647 5.8e-103 377.5 179 100.0
FAN07G2263 Fragaria x ananassa HOM05D011706 ORTHO05D009647 4.3e-82 308.1 177 84.2
RcHm_v2.0_Chr3g0477491 Rosa chinensis HOM05D009879 ORTHO05D009647 6.4e-78 294.3 177 78.0
FAN21G0826 Fragaria x ananassa HOM05D009879 ORTHO05D009647 8.4e-78 293.9 179 79.9
FAN15G2881 Fragaria x ananassa HOM05D009879 ORTHO05D009647 5.4e-77 291.2 157 88.5
FAN17G2464 Fragaria x ananassa HOM05D009879 ORTHO05D009647 1.9e-69 266.2 127 96.1
RcHm_v2.0_Chr1g0332631 Rosa chinensis HOM05D009879 ORTHO05D009647 1.5e-58 229.9 129 80.6
FAN15G0639 Fragaria x ananassa HOM05D008705 ORTHO05D000669 4.1e-48 195.3 100 95.0
FvH4_6g23072 Fragaria vesca HOM05D009879 ORTHO05D009647 5.5e-45 184.9 165 59.4
RcHm_v2.0_Chr5g0007651 Rosa chinensis HOM05D009879 ORTHO05D009647 1.6e-44 183.3 154 53.2
RcHm_v2.0_Chr1g0381361 Rosa chinensis HOM05D016653 ORTHO05D009647 4.6e-44 181.8 154 53.2
RcHm_v2.0_Chr5g0040531 Rosa chinensis HOM05D009879 ORTHO05D009647 3.0e-43 179.1 154 52.6
FvH4_7g02601 Fragaria vesca HOM05D009879 ORTHO05D009647 6.7e-43 177.9 179 54.7
FvH4_7g02471 Fragaria vesca HOM05D009879 ORTHO05D009647 1.1e-42 177.2 177 54.2
FvH4_7g09790 Fragaria vesca HOM05D009879 ORTHO05D009647 3.1e-40 169.1 154 51.3
RcHm_v2.0_Chr1g0346841 Rosa chinensis HOM05D009879 ORTHO05D009647 3.1e-40 169.1 154 52.6
FAN18G0028 Fragaria x ananassa HOM05D009879 ORTHO05D009647 4.1e-40 168.7 81 91.4
FAN03G0178 Fragaria x ananassa HOM05D009879 ORTHO05D009647 9.1e-40 167.5 154 50.6
FAN06G1112 Fragaria x ananassa HOM05D009879 ORTHO05D009647 1.5e-39 166.8 154 50.6
RcHm_v2.0_Chr1g0346821 Rosa chinensis HOM05D009879 ORTHO05D009647 1.5e-39 166.8 154 51.9
FAN06G0059 Fragaria x ananassa HOM05D009879 ORTHO05D009647 1.7e-38 163.3 154 50.0
FvH4_5g24831 Fragaria vesca HOM05D009879 ORTHO05D009647 1.1e-32 144.1 74 90.5
RcHm_v2.0_Chr5g0025151 Rosa chinensis HOM05D008485 ORTHO05D009647 6.1e-20 101.7 169 33.1
RcHm_v2.0_Chr2g0115791 Rosa chinensis HOM05D009879 ORTHO05D009647 7.0e-16 88.2 77 57.1
Atru.chr9.7 Acer truncatum HOM05D008705 ORTHO05D000669 9.1e-16 87.8 168 31.5
Prupe.5G199500 Prunus persica HOM05D008985 ORTHO05D000222 3.8e-14 82.4 146 28.8
FAN13G3330 Fragaria x ananassa HOM05D008485 ORTHO05D009647 1.5e-13 80.5 156 28.2
FAN23G0398 Fragaria x ananassa HOM05D008485 ORTHO05D009647 1.5e-13 80.5 156 28.2
FAN11G3939 Fragaria x ananassa HOM05D008485 ORTHO05D009647 1.9e-13 80.1 156 28.8
FAN23G3051 Fragaria x ananassa HOM05D008485 ORTHO05D009647 1.9e-13 80.1 156 28.8
RcHm_v2.0_Chr7g0208561 Rosa chinensis HOM05D008485 ORTHO05D009647 2.5e-13 79.7 143 30.8
MD03G1255700 Malus domestica HOM05D000514 ORTHO05D000222 3.2e-13 79.3 155 30.3
RcHm_v2.0_Chr3g0486961 Rosa chinensis HOM05D008705 ORTHO05D000669 4.2e-13 79.0 158 30.4
RcHm_v2.0_Chr5g0070861 Rosa chinensis HOM05D008485 ORTHO05D009647 7.2e-13 78.2 156 28.2
RcHm_v2.0_Chr5g0029021 Rosa chinensis HOM05D008485 ORTHO05D009647 1.2e-12 77.4 156 27.6
FAN13G2417 Fragaria x ananassa HOM05D000514 ORTHO05D000222 2.7e-12 76.3 146 31.5
RcHm_v2.0_Chr1g0329081 Rosa chinensis HOM05D008485 ORTHO05D009647 2.7e-12 76.3 134 29.1
FAN26G3266 Fragaria x ananassa HOM05D000514 ORTHO05D000222 3.6e-12 75.9 148 31.1
FvH4_6g34820 Fragaria vesca HOM05D008996 ORTHO05D000222 6.1e-12 75.1 146 30.8
RcHm_v2.0_Chr2g0086631 Rosa chinensis HOM05D002291 ORTHO05D000222 8.0e-12 74.7 151 27.8
RcHm_v2.0_Chr5g0041581 Rosa chinensis HOM05D008485 ORTHO05D009647 8.0e-12 74.7 157 26.8
RcHm_v2.0_Chr6g0264941 Rosa chinensis HOM05D008485 ORTHO05D009647 8.0e-12 74.7 134 28.4
Lj1A283G17 Lonicera japonica HOM05D008705 ORTHO05D000669 1.8e-11 73.6 146 31.5
FAN22G1380 Fragaria x ananassa HOM05D002052 ORTHO05D000222 2.3e-11 73.2 148 30.4
FAN17G2326 Fragaria x ananassa HOM05D002052 ORTHO05D000222 3.0e-11 72.8 148 29.7
RcHm_v2.0_Chr1g0345631 Rosa chinensis HOM05D008705 ORTHO05D000669 3.0e-11 72.8 114 33.3
FvH4_6g18010 Fragaria vesca HOM05D008996 ORTHO05D000222 4.0e-11 72.4 142 29.6
FAN10G2207 Fragaria x ananassa HOM05D009879 ORTHO05D009647 4.0e-11 72.4 80 46.2
FvH4_1g01701 Fragaria vesca HOM05D002291 ORTHO05D000222 5.2e-11 72.0 151 27.2
FAN19G1637 Fragaria x ananassa HOM05D002291 ORTHO05D000222 5.2e-11 72.0 151 27.2
FAN28G2311 Fragaria x ananassa HOM05D002291 ORTHO05D000222 5.2e-11 72.0 151 27.2
RcHm_v2.0_Chr1g0381191 Rosa chinensis HOM05D008705 ORTHO05D000669 5.2e-11 72.0 115 33.0
FvH4_5g31660 Fragaria vesca HOM05D002052 ORTHO05D000222 1.2e-10 70.9 148 29.7
FAN23G1656 Fragaria x ananassa HOM05D002291 ORTHO05D000222 1.2e-10 70.9 151 26.5
FAN02G0378 Fragaria x ananassa HOM05D002052 ORTHO05D000222 1.5e-10 70.5 148 29.7
RcHm_v2.0_Chr7g0214031 Rosa chinensis HOM05D008705 ORTHO05D000669 1.5e-10 70.5 115 32.2
FAN09G0426 Fragaria x ananassa HOM05D002052 ORTHO05D000222 2.0e-10 70.1 148 29.7
FAN26G1277 Fragaria x ananassa HOM05D002291 ORTHO05D000222 2.0e-10 70.1 151 26.5
FAN09G3654 Fragaria x ananassa HOM05D002052 ORTHO05D000222 2.6e-10 69.7 148 29.7
FAN22G1175 Fragaria x ananassa HOM05D002052 ORTHO05D000222 2.6e-10 69.7 148 29.1
FAN05G1222 Fragaria x ananassa HOM05D002052 ORTHO05D000222 3.4e-10 69.3 148 29.1
MD16G1275200 Malus domestica HOM05D000514 ORTHO05D000222 3.4e-10 69.3 159 29.6
FAN06G4660 Fragaria x ananassa HOM05D002052 ORTHO05D000222 4.4e-10 68.9 148 29.7
FAN05G1925 Fragaria x ananassa HOM05D002052 ORTHO05D000222 7.5e-10 68.2 148 28.4
MD16G1222400 Malus domestica HOM05D000514 ORTHO05D000222 7.5e-10 68.2 171 28.1
CANSAT01G1847 Cannabis sativa HOM05D014621 ORTHO05D015019 9.8e-10 67.8 118 33.1
MD03G1062700 Malus domestica HOM05D000514 ORTHO05D000222 1.3e-09 67.4 170 28.2
FAN05G3030 Fragaria x ananassa HOM05D002052 ORTHO05D000222 1.7e-09 67.0 148 29.1
FAN21G0825 Fragaria x ananassa HOM05D002052 ORTHO05D000222 1.7e-09 67.0 147 27.9
FAN05G3105 Fragaria x ananassa HOM05D002052 ORTHO05D000222 4.9e-09 65.5 170 28.8
FAN15G3643 Fragaria x ananassa HOM05D002052 ORTHO05D000222 6.3e-09 65.1 148 28.4
Rhsim09G0074300 Rhododendron simsii HOM05D000791 ORTHO05D000669 6.3e-09 65.1 101 37.6
FAN26G2059 Fragaria x ananassa HOM05D000514 ORTHO05D000222 8.3e-09 64.7 145 29.7
FAN09G4484 Fragaria x ananassa HOM05D002052 ORTHO05D000222 1.4e-08 63.9 113 33.6
FAN11G0602 Fragaria x ananassa HOM05D002052 ORTHO05D000222 1.4e-08 63.9 171 28.1
PSO210G0630 Papaver somniferum HOM05D030578 ORTHO05D000669 1.4e-08 63.9 157 27.4
FvH4_2g08145 Fragaria vesca HOM05D008705 ORTHO05D000669 1.8e-08 63.5 152 28.3
FAN12G1088 Fragaria x ananassa HOM05D002052 ORTHO05D000222 1.8e-08 63.5 157 27.4
FAN10G3855 Fragaria x ananassa HOM05D008705 ORTHO05D000669 2.4e-08 63.2 152 28.3
FAN28G1086 Fragaria x ananassa HOM05D005731 ORTHO05D000222 2.4e-08 63.2 140 27.9
FvH4_4g10364 Fragaria vesca HOM05D002052 ORTHO05D000222 3.1e-08 62.8 104 32.7
FAN09G2059 Fragaria x ananassa HOM05D000514 ORTHO05D000222 3.1e-08 62.8 144 27.8
FAN26G2930 Fragaria x ananassa HOM05D002052 ORTHO05D000222 3.1e-08 62.8 134 29.1
FAN16G2893 Fragaria x ananassa HOM05D005731 ORTHO05D000222 4.1e-08 62.4 146 26.7
FAN20G2801 Fragaria x ananassa HOM05D005731 ORTHO05D000222 4.1e-08 62.4 146 26.7
FAN02G4342 Fragaria x ananassa HOM05D005731 ORTHO05D000222 5.4e-08 62.0 146 26.7
FAN04G1617 Fragaria x ananassa HOM05D005731 ORTHO05D000222 5.4e-08 62.0 146 26.7
FAN08G0364 Fragaria x ananassa HOM05D005731 ORTHO05D000222 5.4e-08 62.0 146 26.7
FAN10G2241 Fragaria x ananassa HOM05D005731 ORTHO05D000222 5.4e-08 62.0 146 26.7
FAN16G1379 Fragaria x ananassa HOM05D005731 ORTHO05D000222 5.4e-08 62.0 146 26.7
FAN23G2333 Fragaria x ananassa HOM05D005731 ORTHO05D000222 5.4e-08 62.0 146 26.7
FAN24G1543 Fragaria x ananassa HOM05D005731 ORTHO05D000222 5.4e-08 62.0 146 26.7
FAN25G1806 Fragaria x ananassa HOM05D005731 ORTHO05D000222 5.4e-08 62.0 146 26.7
FvH4_3g30710 Fragaria vesca HOM05D000514 ORTHO05D000222 7.0e-08 61.6 112 31.2
CiPaw.10G065700 Carya illinoinensis HOM05D000791 ORTHO05D000669 9.1e-08 61.2 122 30.3
Migut.I00328 Erythranthe guttata HOM05D023261 ORTHO05D000222 9.1e-08 61.2 163 25.2
FvH4_4g05492 Fragaria vesca HOM05D008705 ORTHO05D000669 1.6e-07 60.5 152 27.6
FAN20G2701 Fragaria x ananassa HOM05D008705 ORTHO05D000669 1.6e-07 60.5 152 27.6
FAN25G2809 Fragaria x ananassa HOM05D005731 ORTHO05D000222 1.6e-07 60.5 146 26.7
Dinv03037 Davidia involucrata HOM05D010418 ORTHO05D000669 2.0e-07 60.1 172 27.3
FAN09G0646 Fragaria x ananassa HOM05D000514 ORTHO05D000222 2.0e-07 60.1 106 30.2
FAN09G2379 Fragaria x ananassa HOM05D000514 ORTHO05D000222 2.0e-07 60.1 152 28.9
COL.COLO4_21469 Corchorus olitorius HOM05D003120 ORTHO05D003568 2.7e-07 59.7 178 28.1
FAN10G3470 Fragaria x ananassa HOM05D009879 ORTHO05D009647 2.7e-07 59.7 66 43.9
MD03G1170400 Malus domestica HOM05D000514 ORTHO05D000222 2.7e-07 59.7 105 31.4
RcHm_v2.0_Chr2g0102381 Rosa chinensis HOM05D008705 ORTHO05D000669 2.7e-07 59.7 112 33.0
Dinv18123 Davidia involucrata HOM05D010418 ORTHO05D000669 3.5e-07 59.3 116 30.2
FAN10G1422 Fragaria x ananassa HOM05D008485 ORTHO05D009647 3.5e-07 59.3 94 30.9
MBI19_g30599_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 3.5e-07 59.3 155 29.0
FAN03G0576 Fragaria x ananassa HOM05D005731 ORTHO05D000222 4.5e-07 58.9 146 26.0
MBI12_g43234_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 4.5e-07 58.9 154 26.0
TPR.G36323 Trifolium pratense HOM05D008291 ORTHO05D003568 4.5e-07 58.9 101 33.7
Dinv06647 Davidia involucrata HOM05D010418 ORTHO05D000669 5.9e-07 58.5 153 26.8
FAN25G2101 Fragaria x ananassa HOM05D005731 ORTHO05D000222 5.9e-07 58.5 119 27.7
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.9e-07 58.5 157 25.5
Aqoxy3G01388 Aquilegia oxysepala HOM05D000791 ORTHO05D000669 1.0e-06 57.8 111 29.7
FvH4_3g22812 Fragaria vesca HOM05D023520 ORTHO05D025365 1.0e-06 57.8 144 27.8
FAN11G3479 Fragaria x ananassa HOM05D002052 ORTHO05D000222 1.0e-06 57.8 133 29.3
MBI07_g22513_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 1.0e-06 57.8 170 25.9
Aqoxy4G01021 Aquilegia oxysepala HOM05D000791 ORTHO05D000669 1.3e-06 57.4 111 29.7
RcHm_v2.0_Chr1g0341051 Rosa chinensis HOM05D008485 ORTHO05D009647 1.3e-06 57.4 142 26.1
FAN10G2059 Fragaria x ananassa HOM05D008485 ORTHO05D009647 1.7e-06 57.0 75 36.0
FAN14G0329 Fragaria x ananassa HOM05D008996 ORTHO05D000222 1.7e-06 57.0 100 31.0
FAN26G3191 Fragaria x ananassa HOM05D000514 ORTHO05D000222 1.7e-06 57.0 144 28.5
PGR004G1992 Punica granatum HOM05D000791 ORTHO05D000669 1.7e-06 57.0 154 25.3
FAN09G1129 Fragaria x ananassa HOM05D008705 ORTHO05D000669 2.3e-06 56.6 159 27.0
FAN01G1349 Fragaria x ananassa HOM05D002052 ORTHO05D000222 2.9e-06 56.2 159 25.2
FAN13G0756 Fragaria x ananassa HOM05D008485 ORTHO05D009647 2.9e-06 56.2 86 32.6
MELO3C034759.2 Cucumis melo HOM05D001963 ORTHO05D001863 3.8e-06 55.8 125 27.2
FAN27G2708 Fragaria x ananassa HOM05D000514 ORTHO05D000222 3.8e-06 55.8 145 25.5
RcHm_v2.0_Chr2g0106131 Rosa chinensis HOM05D008705 ORTHO05D000669 3.8e-06 55.8 82 39.0
SGA_v2.0_scaffold752G53551 Striga asiatica HOM05D025956 ORTHO05D000669 3.8e-06 55.8 146 28.1
CSS0005105 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 5.0e-06 55.5 147 28.6
CSS0037888 Camellia sinensis var. sinensis HOM05D010934 ORTHO05D000669 5.0e-06 55.5 147 28.6
Dinv18594 Davidia involucrata HOM05D000791 ORTHO05D000669 5.0e-06 55.5 116 28.4
MBI19_g01025_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 5.0e-06 55.5 155 26.5
MBI19_g27593_MAGBIO Magnolia biondii HOM05D000791 ORTHO05D000669 6.6e-06 55.1 171 23.4
FAN07G2924 Fragaria x ananassa HOM05D002052 ORTHO05D000222 8.6e-06 54.7 148 26.4
FAN22G0323 Fragaria x ananassa HOM05D000514 ORTHO05D000222 8.6e-06 54.7 110 26.4
PSO675G8190 Papaver somniferum HOM05D017761 ORTHO05D000669 8.6e-06 54.7 91 29.7
RcHm_v2.0_Chr4g0403221 Rosa chinensis HOM05D008485 ORTHO05D009647 8.6e-06 54.7 58 43.1
RcHm_v2.0_Chr4g0434301 Rosa chinensis HOM05D008485 ORTHO05D009647 8.6e-06 54.7 58 43.1


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