Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN01G2868 Fragaria x ananassa HOM05D004806 ORTHO05D005397 0.0e+00 1441.0 812 100.0
FvH4_7g24020 Fragaria vesca HOM05D004806 ORTHO05D005397 0.0e+00 1286.6 813 92.3
FAN06G0754 Fragaria x ananassa HOM05D004806 ORTHO05D005397 0.0e+00 1268.4 813 88.6
FAN03G1683 Fragaria x ananassa HOM05D004806 ORTHO05D005397 0.0e+00 1239.2 814 89.4
FAN10G3438 Fragaria x ananassa HOM05D004806 ORTHO05D005397 0.0e+00 1221.8 814 85.7
RcHm_v2.0_Chr1g0369401 Rosa chinensis HOM05D004806 ORTHO05D005397 0.0e+00 1162.5 811 78.9
Prupe.2G246100 Prunus persica HOM05D004806 ORTHO05D005397 1.8e-276 956.1 810 66.5
MD01G1147200 Malus domestica HOM05D004806 ORTHO05D005397 1.9e-262 909.4 805 65.0
QL08p062653 Quercus lobata HOM05D004806 ORTHO05D005397 3.8e-226 788.9 720 62.2
Thecc.10G026200 Theobroma cacao HOM05D004806 ORTHO05D005397 3.9e-207 725.7 706 58.9
Duzib106G0751 Durio zibethinus HOM05D004806 ORTHO05D005397 5.3e-204 715.3 656 60.4
CiPaw.01G295700 Carya illinoinensis HOM05D004806 ORTHO05D005397 2.9e-202 709.5 715 57.6
Duzib114G0963 Durio zibethinus HOM05D004806 ORTHO05D005397 8.5e-202 708.0 708 57.9
Gohir.A06G164600 Gossypium hirsutum HOM05D004806 ORTHO05D005397 1.2e-200 704.1 699 58.2
Dinv34423 Davidia involucrata HOM05D004806 ORTHO05D005397 3.6e-200 702.6 714 56.7
Ciclev10030877m.g Citrus clementina HOM05D004806 ORTHO05D005397 1.3e-199 700.7 686 58.6
Gohir.D06G170100 Gossypium hirsutum HOM05D004806 ORTHO05D005397 5.1e-199 698.7 702 58.4
Gorai.010G199100 Gossypium raimondii HOM05D004806 ORTHO05D005397 1.9e-198 696.8 699 58.2
Atru.chr12.242 Acer truncatum HOM05D004806 ORTHO05D005397 4.8e-197 692.2 689 57.5
Potri.010G192800 Populus trichocarpa HOM05D004806 ORTHO05D005397 1.1e-193 681.0 709 55.7
COL.COLO4_25659 Corchorus olitorius HOM05D004806 ORTHO05D005397 1.6e-192 677.2 701 56.5
Manes.10G017800 Manihot esculenta HOM05D004806 ORTHO05D005397 3.9e-191 672.5 689 57.0
Gorai.011G280200 Gossypium raimondii HOM05D004806 ORTHO05D005397 4.3e-190 669.1 715 56.6
Potri.008G064500 Populus trichocarpa HOM05D004806 ORTHO05D005397 9.7e-190 667.9 705 55.7
Gohir.D10G243800 Gossypium hirsutum HOM05D004806 ORTHO05D005397 2.8e-189 666.4 709 56.4
Dinv20955 Davidia involucrata HOM05D004806 ORTHO05D005397 2.4e-188 663.3 717 55.6
Dinv20988 Davidia involucrata HOM05D004806 ORTHO05D005397 2.4e-188 663.3 717 55.6
Gohir.A10G229600 Gossypium hirsutum HOM05D004806 ORTHO05D005397 1.2e-187 661.0 715 55.8
CiPaw.02G189800 Carya illinoinensis HOM05D004806 ORTHO05D005397 1.9e-185 653.7 713 56.2
Lj1C950G18 Lonicera japonica HOM05D004806 ORTHO05D005397 9.4e-185 651.4 716 52.9
CSS0019944 Camellia sinensis var. sinensis HOM05D004806 ORTHO05D005397 4.7e-184 649.0 722 55.4
Actinidia33944 Actinidia chinensis HOM05D004806 ORTHO05D005397 6.7e-183 645.2 704 54.7
MELO3C008275.2 Cucumis melo HOM05D004806 ORTHO05D005397 3.3e-182 642.9 711 54.4
TWI53G0900 Tripterygium wilfordii HOM05D004806 ORTHO05D005397 2.4e-180 636.7 712 54.5
Sabra08G0047400 Salix brachista HOM05D004806 ORTHO05D005397 4.5e-179 632.5 692 55.2
TAR369G0441 Trochodendron aralioides HOM05D004806 ORTHO05D005397 2.2e-178 630.2 715 53.4
PGR142G0174 Punica granatum HOM05D004806 ORTHO05D005397 3.2e-177 626.3 698 54.0
Nn2g11386 Nelumbo nucifera HOM05D004806 ORTHO05D005397 4.2e-177 625.9 729 51.2
Sed0002029 Sechium edule HOM05D004806 ORTHO05D005397 4.2e-177 625.9 710 54.4
Haze_17182 Corylus avellana HOM05D004806 ORTHO05D005397 1.5e-174 617.5 553 62.6
Glyma.14G062000 Glycine max HOM05D004806 ORTHO05D005397 1.3e-173 614.4 707 54.0
VMungo0647G1582 Vigna mungo HOM05D004806 ORTHO05D005397 1.7e-173 614.0 688 53.8
arahy.Tifrunner.gnm1.ann1.76KK00 Arachis hypogaea HOM05D004806 ORTHO05D005397 1.7e-170 604.0 685 53.9
Hund15980 Selenicereus undatus HOM05D004806 ORTHO05D005397 7.2e-169 598.6 709 50.5
Nn2g13619 Nelumbo nucifera HOM05D004806 ORTHO05D005397 3.6e-168 596.3 722 51.7
Hund13832 Selenicereus undatus HOM05D004806 ORTHO05D005397 1.0e-167 594.7 693 52.4
Lalb_Chr04g0250791 Lupinus albus HOM05D004806 ORTHO05D005397 1.8e-167 594.0 696 52.2
AUR62022839 Chenopodium quinoa HOM05D004806 ORTHO05D005397 1.2e-166 591.3 715 49.7
Ca_05931_v3 Cicer arietinum L. HOM05D004806 ORTHO05D005397 1.2e-166 591.3 699 53.1
AUR62012206 Chenopodium quinoa HOM05D004806 ORTHO05D005397 1.1e-164 584.7 715 49.4
Medtr5g081880 Medicago truncatula HOM05D004806 ORTHO05D005397 1.1e-164 584.7 667 53.2
Nitab4.5_0003720g0010 Nicotiana tabacum HOM05D004806 ORTHO05D005397 7.0e-164 582.0 707 51.2
Eucgr.G03032 Eucalyptus grandis HOM05D004806 ORTHO05D005397 2.0e-163 580.5 707 48.8
Phvul.008G226400 Phaseolus vulgaris HOM05D004806 ORTHO05D005397 3.5e-163 579.7 686 51.7
Psat2g035600 Pisum sativum HOM05D004806 ORTHO05D005397 4.5e-163 579.3 666 52.7
TPR.G8038 Trifolium pratense HOM05D004806 ORTHO05D005397 7.7e-163 578.6 716 50.3
Cc02_g06920 Coffea canephora HOM05D004806 ORTHO05D005397 8.5e-162 575.1 707 50.1
Nitab4.5_0000737g0020 Nicotiana tabacum HOM05D004806 ORTHO05D005397 1.2e-160 571.2 707 50.1
Peaxi162Scf00401g00118 Petunia axillaris HOM05D004806 ORTHO05D005397 1.6e-160 570.9 657 52.2
SalBow6G1361 Salvia bowleyana HOM05D004806 ORTHO05D005397 1.6e-160 570.9 709 49.6
LjContig00357g0026481 Lotus japonicus HOM05D004806 ORTHO05D005397 4.7e-160 569.3 691 51.5
SalBow6G1823 Salvia bowleyana HOM05D004806 ORTHO05D005397 6.1e-160 568.9 709 49.6
DCAR_027553 Daucus carota HOM05D004806 ORTHO05D005397 1.4e-159 567.8 702 50.1
Actinidia29677 Actinidia chinensis HOM05D004806 ORTHO05D005397 1.8e-159 567.4 711 49.6
arahy.Tifrunner.gnm1.ann1.13YYB8 Arachis hypogaea HOM05D004806 ORTHO05D005397 8.8e-159 565.1 649 52.9
vmacro06995 Vaccinium macrocarpon HOM05D004806 ORTHO05D005397 6.3e-157 558.9 700 50.3
EL10Ac2g04786 Beta vulgaris HOM05D004806 ORTHO05D005397 2.4e-156 557.0 776 45.7
MBI14_g36885_MAGBIO Magnolia biondii HOM05D004806 ORTHO05D005397 2.1e-152 543.9 735 48.0
Ah.10g036410 Amaranthus hybridus HOM05D004806 ORTHO05D005397 1.3e-149 534.6 698 48.1
ClCG11G006350 Citrullus lanatus HOM05D004806 ORTHO05D005397 2.5e-145 520.4 579 52.0
Sc11g0007270 Simmondsia chinensis HOM05D004806 ORTHO05D005397 7.3e-145 518.8 727 46.9
CsaV3_6G001640 Cucumis sativus L. HOM05D004806 ORTHO05D005397 9.5e-145 518.5 580 52.9
ECA238G2978 Erigeron canadensis HOM05D004806 ORTHO05D005397 2.1e-144 517.3 680 48.7
Aqoxy4G02663 Aquilegia oxysepala HOM05D004806 ORTHO05D005397 1.4e-143 514.6 696 47.4
THA.LOC104824306 Tarenaya hassleriana HOM05D004806 ORTHO05D005397 2.6e-142 510.4 709 48.8
PGSC0003DMG400027178 Solanum tuberosum HOM05D004806 ORTHO05D005397 5.4e-140 502.7 633 50.4
Sopen05g031160 Solanum pennellii HOM05D004806 ORTHO05D005397 7.8e-139 498.8 633 49.8
Solyc05g052630.4 Solanum lycopersicum HOM05D004806 ORTHO05D005397 3.9e-138 496.5 633 49.8
HanXRQChr14g0459971 Helianthus annuus HOM05D004806 ORTHO05D005397 1.6e-136 491.1 706 45.9
Oeu055830.1 Olea europaea HOM05D004806 ORTHO05D005397 7.5e-134 482.3 715 43.6
Ah.16g103100 Amaranthus hybridus HOM05D004806 ORTHO05D005397 3.7e-133 479.9 740 43.0
Nitab4.5_0004338g0050 Nicotiana tabacum HOM05D004806 ORTHO05D005397 8.3e-133 478.8 703 44.8
Lsat_1_v5_gn_2_121900 Lactuca sativa HOM05D004806 ORTHO05D005397 1.4e-132 478.0 712 46.3
Aa31LG5G19660 Aethionema arabicum HOM05D004806 ORTHO05D005397 3.0e-130 470.3 709 45.8
Migut.F01427 Erythranthe guttata HOM05D004806 ORTHO05D005397 6.6e-130 469.2 696 43.2
Nitab4.5_0002100g0120 Nicotiana tabacum HOM05D004806 ORTHO05D005397 5.4e-124 449.5 702 43.2
unitig_52.g16836 Utricularia gibba HOM05D004806 ORTHO05D005397 3.0e-122 443.7 713 43.3
PSO339G2633 Papaver somniferum HOM05D004806 ORTHO05D005397 1.7e-117 427.9 733 42.2
PSO801G0450 Papaver somniferum HOM05D004806 ORTHO05D005397 4.2e-116 423.3 730 42.1
CDE02G2339 Ceratophyllum demersum HOM05D004806 ORTHO05D005397 3.3e-113 413.7 671 41.3
Carub.0004s2208 Capsella rubella HOM05D004806 ORTHO05D005397 1.6e-112 411.4 679 43.9
AL4G37530 Arabidopsis lyrata HOM05D004806 ORTHO05D005397 5.3e-111 406.4 680 43.2
Rhsim03G0140100 Rhododendron simsii HOM05D004806 ORTHO05D005397 1.5e-110 404.8 598 46.2
Sed0010788 Sechium edule HOM05D004806 ORTHO05D005397 2.0e-110 404.4 486 49.6
AT2G39950 Arabidopsis thaliana HOM05D004806 ORTHO05D005397 1.9e-108 397.9 690 43.0
Thhalv10017559m.g Eutrema salsugineum HOM05D004806 ORTHO05D005397 5.4e-108 396.4 641 44.8
Manes.07G125400 Manihot esculenta HOM05D004806 ORTHO05D005397 5.4e-108 396.4 411 58.4
HPP92_018194 Vanilla planifolia HOM05D004806 ORTHO05D005397 2.1e-107 394.4 667 40.9
Sp4g22260 Schrenkiella parvula HOM05D004806 ORTHO05D005397 1.0e-106 392.1 687 41.9
HanXRQChr07g0200671 Helianthus annuus HOM05D004806 ORTHO05D005397 3.7e-104 383.6 704 39.5
Oeu036630.1 Olea europaea HOM05D004806 ORTHO05D005397 2.4e-103 380.9 491 47.5
SGA_v2.0_scaffold76G25081 Striga asiatica HOM05D004806 ORTHO05D005397 3.1e-103 380.6 713 40.7
Aqoxy2G00978 Aquilegia oxysepala HOM05D004806 ORTHO05D005397 9.0e-103 379.0 617 42.9
C04p07550 Brassica napus HOM05D004806 ORTHO05D005397 3.8e-101 373.6 679 40.8
BolC4t22372H Brassica oleracea HOM05D004806 ORTHO05D005397 3.8e-101 373.6 679 40.8
Glyma.02G254400 Glycine max HOM05D004806 ORTHO05D005397 5.5e-100 369.8 454 51.8
BraA05t19615Z Brassica rapa HOM05D004806 ORTHO05D005397 1.0e-98 365.5 684 40.1
HanXRQChr08g0222261 Helianthus annuus HOM05D004806 ORTHO05D005397 5.1e-98 363.2 636 41.4
Zm00001eb297980 Zea mays HOM05D004806 ORTHO05D005397 9.0e-95 352.4 574 40.8
Lsat_1_v5_gn_8_12421 Lactuca sativa HOM05D004806 ORTHO05D005397 5.1e-90 336.7 721 38.8
RcHm_v2.0_Chr1g0369361 Rosa chinensis HOM05D004806 ORTHO05D005397 1.6e-88 331.6 276 67.4
SGA_v2.0_scaffold343G49443 Striga asiatica HOM05D004806 ORTHO05D005397 2.1e-88 331.3 605 41.2
Sc11g0006990 Simmondsia chinensis HOM05D004806 ORTHO05D005397 1.3e-80 305.4 352 51.7
Lalb_Chr17g0346601 Lupinus albus HOM05D004806 ORTHO05D005397 1.4e-79 302.0 491 42.6
TAR623G1028 Trochodendron aralioides HOM05D004806 ORTHO05D005397 1.3e-77 295.4 615 39.3
CARHR134870 Cardamine hirsuta HOM05D004806 ORTHO05D005397 9.4e-76 289.3 479 43.6
GSVIVG01016366001 Vitis vinifera HOM05D004806 ORTHO05D005397 1.2e-70 272.3 239 59.8
ATR0618G022 Amborella trichopoda HOM05D004806 ORTHO05D005397 8.5e-61 239.6 320 45.0
MD07G1214200 Malus domestica HOM05D004806 ORTHO05D005397 4.7e-59 233.8 155 81.9
CDE09G0712 Ceratophyllum demersum HOM05D004806 ORTHO05D005397 1.2e-57 229.2 301 45.5
Sabra10G0148400 Salix brachista HOM05D004806 ORTHO05D005397 1.1e-44 186.0 164 61.6
SHI03525 Sapria himalayana HOM05D004806 ORTHO05D005397 3.3e-44 184.5 439 33.0
AagrBONN_evm.TU.Sc2ySwM_368.289 Anthoceros agrestis HOM05D004806 ORTHO05D005397 2.8e-43 181.4 266 39.1
CDE09G1248 Ceratophyllum demersum HOM05D000530 ORTHO05D003341 1.8e-42 178.7 269 44.6
TPR.G40368 Trifolium pratense HOM05D004806 ORTHO05D005397 3.4e-41 174.5 139 66.9
Lalb_Chr17g0346611 Lupinus albus HOM05D004806 ORTHO05D005397 6.3e-40 170.2 114 72.8
Mapoly0096s0071 Marchantia polymorpha HOM05D004806 ORTHO05D005397 7.0e-39 166.8 635 30.4
BcaB02g09066 Brassica carinata HOM05D004806 ORTHO05D005397 1.6e-38 165.6 232 45.3
CBR_g37391 Chara braunii HOM05D004806 ORTHO05D005397 5.9e-38 163.7 274 35.4
Oeu059753.1 Olea europaea HOM05D004806 ORTHO05D005397 2.5e-36 158.3 164 54.9
Oeu022381.1 Olea europaea HOM05D004806 ORTHO05D005397 4.9e-32 144.1 132 56.1
A05p06470 Brassica napus HOM05D004806 ORTHO05D005397 1.8e-31 142.1 161 50.9
SMO358G0301 Selaginella moellendorffii HOM05D004806 ORTHO05D005397 3.3e-28 131.3 494 28.5
SHI03526 Sapria himalayana HOM05D004806 ORTHO05D005397 5.6e-28 130.6 148 48.6
Haze_17183 Corylus avellana HOM05D004806 ORTHO05D005397 2.0e-25 122.1 138 56.5
ATR0618G087 Amborella trichopoda HOM05D004806 ORTHO05D005397 2.2e-24 118.6 136 52.9
AagrBONN_evm.TU.Sc2ySwM_369.624 Anthoceros agrestis HOM05D004806 ORTHO05D005397 1.6e-22 112.5 442 28.3
RcHm_v2.0_Chr1g0313541 Rosa chinensis HOM05D004806 ORTHO05D005397 6.0e-22 110.5 63 88.9
Os07g0100500 Oryza sativa ssp. japonica HOM05D004806 ORTHO05D005397 6.2e-19 100.5 71 62.0
SalBow6G4818 Salvia bowleyana HOM05D004806 ORTHO05D005397 2.2e-16 92.0 112 52.7
ATR0723G011 Amborella trichopoda HOM05D004806 ORTHO05D005397 1.7e-13 82.4 72 54.2
Zm00001eb057510 Zea mays HOM05D004806 ORTHO05D005397 2.3e-13 82.0 75 48.0
CAN.G853.43 Capsicum annuum HOM05D004806 ORTHO05D005397 4.4e-09 67.8 48 70.8
Oeu061605.1 Olea europaea HOM05D004806 ORTHO05D005397 9.9e-09 66.6 90 43.3
Oeu043075.1 Olea europaea HOM05D004806 ORTHO05D005397 4.9e-08 64.3 122 41.0
Oeu021121.1 Olea europaea HOM05D004806 ORTHO05D005397 6.4e-08 63.9 46 60.9
Pp3c26_8620 Physcomitrium patens HOM05D004806 ORTHO05D005397 1.4e-07 62.8 113 32.7
MD12G1168400 Malus domestica HOM05D004806 ORTHO05D005397 1.2e-06 59.7 28 92.9
Oeu059752.1 Olea europaea HOM05D004806 ORTHO05D005397 1.2e-06 59.7 91 41.8
SalBow2G3552 Salvia bowleyana HOM05D034888 ORTHO05D005397 7.8e-06 57.0 36 72.2


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