Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN01G2832 Fragaria x ananassa HOM05D007220 ORTHO05D009058 4.7e-86 321.2 171 100.0
FAN03G0488 Fragaria x ananassa HOM05D007220 ORTHO05D009058 4.7e-78 294.7 171 89.5
FAN03G2818 Fragaria x ananassa HOM05D007220 ORTHO05D009058 4.7e-78 294.7 171 89.5
FAN10G3220 Fragaria x ananassa HOM05D007220 ORTHO05D009058 4.7e-78 294.7 171 93.0
FAN06G0674 Fragaria x ananassa HOM05D007220 ORTHO05D009058 8.0e-78 293.9 171 92.4
FAN06G4318 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.4e-77 293.1 171 89.5
FvH4_7g27960 Fragaria vesca HOM05D007220 ORTHO05D009058 3.0e-77 292.0 171 89.5
RcHm_v2.0_Chr1g0374911 Rosa chinensis HOM05D007220 ORTHO05D009058 1.1e-66 256.9 174 81.6
MD01G1184500 Malus domestica HOM05D007220 ORTHO05D009058 8.1e-54 214.2 176 65.3
Manes.14G034000 Manihot esculenta HOM05D007220 ORTHO05D009058 6.2e-46 188.0 185 58.9
Thecc.03G158900 Theobroma cacao HOM05D007220 ORTHO05D009058 1.1e-45 187.2 166 66.9
Haze_13838 Corylus avellana HOM05D007220 ORTHO05D009058 1.1e-42 177.2 181 57.5
GSVIVG01018558001 Vitis vinifera HOM05D007220 ORTHO05D009058 1.4e-42 176.8 153 58.8
Duzib205G1715 Durio zibethinus HOM05D007220 ORTHO05D009058 5.4e-42 174.9 167 59.9
BcaC01g06128 Brassica carinata HOM05D007220 ORTHO05D009058 7.1e-42 174.5 167 59.3
C03p18980 Brassica napus HOM05D007220 ORTHO05D009058 7.1e-42 174.5 167 59.3
BolC3t14287H Brassica oleracea HOM05D007220 ORTHO05D009058 7.1e-42 174.5 167 59.3
Cfa008220 Carpinus fangiana HOM05D007220 ORTHO05D009058 9.3e-42 174.1 181 56.4
TWI39G1186 Tripterygium wilfordii HOM05D007220 ORTHO05D009058 9.3e-42 174.1 160 57.5
Dinv28549 Davidia involucrata HOM05D007220 ORTHO05D009058 2.1e-41 172.9 157 59.9
Cpa.g.sc3.292 Carica papaya HOM05D007220 ORTHO05D009058 6.0e-41 171.4 191 58.1
Actinidia25024 Actinidia chinensis HOM05D007220 ORTHO05D009058 3.0e-40 169.1 174 60.9
THA.LOC104811513 Tarenaya hassleriana HOM05D007220 ORTHO05D009058 3.0e-40 169.1 176 56.8
MELO3C006826.2 Cucumis melo HOM05D007220 ORTHO05D009058 3.9e-40 168.7 176 54.5
COL.COLO4_14153 Corchorus olitorius HOM05D007220 ORTHO05D009058 5.1e-40 168.3 164 62.2
CsaV3_3G016270 Cucumis sativus L. HOM05D007220 ORTHO05D009058 5.1e-40 168.3 170 54.7
Eucgr.A02878 Eucalyptus grandis HOM05D007220 ORTHO05D009058 8.7e-40 167.5 183 55.2
BraA03t10902Z Brassica rapa HOM05D007220 ORTHO05D009058 1.5e-39 166.8 170 57.1
Sabra15G0142900 Salix brachista HOM05D007220 ORTHO05D009058 2.5e-39 166.0 175 59.4
BcaB01g04168 Brassica carinata HOM05D007220 ORTHO05D009058 4.3e-39 165.2 167 60.5
Dinv22967 Davidia involucrata HOM05D007220 ORTHO05D009058 5.6e-39 164.9 141 61.0
Gohir.D07G043100 Gossypium hirsutum HOM05D007220 ORTHO05D009058 5.6e-39 164.9 104 75.0
Gohir.A07G038900 Gossypium hirsutum HOM05D007220 ORTHO05D009058 9.6e-39 164.1 104 74.0
Gorai.001G046100 Gossypium raimondii HOM05D007220 ORTHO05D009058 9.6e-39 164.1 104 74.0
ClCG05G007450 Citrullus lanatus HOM05D007220 ORTHO05D009058 1.3e-38 163.7 176 52.3
PGR042G1708 Punica granatum HOM05D007220 ORTHO05D009058 2.8e-38 162.5 104 74.0
unitig_46.g18768 Utricularia gibba HOM05D007220 ORTHO05D009058 2.8e-38 162.5 161 55.9
Glyma.09G232600 Glycine max HOM05D007220 ORTHO05D009058 3.6e-38 162.2 172 53.5
AL8G25850 Arabidopsis lyrata HOM05D007220 ORTHO05D009058 1.4e-37 160.2 173 53.2
Sc19g0001910 Simmondsia chinensis HOM05D007220 ORTHO05D009058 1.4e-37 160.2 182 52.7
Carub.0008s1158 Capsella rubella HOM05D007220 ORTHO05D009058 1.8e-37 159.8 170 52.9
Potri.015G129600 Populus trichocarpa HOM05D007220 ORTHO05D009058 1.8e-37 159.8 175 59.4
CiPaw.04G061800 Carya illinoinensis HOM05D007220 ORTHO05D009058 2.4e-37 159.5 172 56.4
AT5G51545 Arabidopsis thaliana HOM05D007220 ORTHO05D009058 5.3e-37 158.3 154 55.8
QL09p019051 Quercus lobata HOM05D007220 ORTHO05D009058 5.3e-37 158.3 187 55.1
Cc02_g04040 Coffea canephora HOM05D007220 ORTHO05D009058 2.0e-36 156.4 131 60.3
Medtr4g035825 Medicago truncatula HOM05D007220 ORTHO05D009058 2.6e-36 156.0 154 55.2
Sp6g13740 Schrenkiella parvula HOM05D007220 ORTHO05D009058 5.8e-36 154.8 167 56.3
arahy.Tifrunner.gnm1.ann1.0IXC5E Arachis hypogaea HOM05D007220 ORTHO05D009058 9.9e-36 154.1 104 70.2
Ciclev10005924m.g Citrus clementina HOM05D007220 ORTHO05D009058 1.3e-35 153.7 112 69.6
Psat7g150000 Pisum sativum HOM05D007220 ORTHO05D009058 2.2e-35 152.9 152 57.9
MSTRG.27183 Avicennia marina HOM05D007220 ORTHO05D009058 3.8e-35 152.1 177 54.2
vmacro09892 Vaccinium macrocarpon HOM05D007220 ORTHO05D009058 6.4e-35 151.4 182 51.6
VMungo1127G0384 Vigna mungo HOM05D007220 ORTHO05D009058 6.4e-35 151.4 158 58.2
A03p16110 Brassica napus HOM05D007220 ORTHO05D009058 8.4e-35 151.0 167 56.9
CARHR264320 Cardamine hirsuta HOM05D007220 ORTHO05D009058 8.4e-35 151.0 106 67.9
Rhsim09G0192800 Rhododendron simsii HOM05D007220 ORTHO05D009058 1.1e-34 150.6 156 53.2
Lj3g0016008 Lotus japonicus HOM05D007220 ORTHO05D009058 1.4e-34 150.2 146 55.5
Ca_30916_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 1.9e-34 149.8 154 53.2
Nitab4.5_0001548g0050 Nicotiana tabacum HOM05D007220 ORTHO05D009058 3.2e-34 149.1 129 60.5
Nn4g26358 Nelumbo nucifera HOM05D007220 ORTHO05D009058 4.2e-34 148.7 178 48.9
Solyc03g083570.3 Solanum lycopersicum HOM05D007220 ORTHO05D009058 5.4e-34 148.3 134 59.7
Atru.chr1.664 Acer truncatum HOM05D007220 ORTHO05D009058 2.1e-33 146.4 104 65.4
SGA_v2.0_scaffold2G01175 Striga asiatica HOM05D007220 ORTHO05D009058 2.1e-33 146.4 170 54.7
HanXRQChr08g0223851 Helianthus annuus HOM05D007220 ORTHO05D009058 2.7e-33 146.0 161 50.3
Peaxi162Scf00241g00624 Petunia axillaris HOM05D007220 ORTHO05D009058 4.6e-33 145.2 150 55.3
SGA_v2.0_scaffold486G52391 Striga asiatica HOM05D007220 ORTHO05D009058 4.6e-33 145.2 167 54.5
CSS0026352 Camellia sinensis var. sinensis HOM05D007220 ORTHO05D009058 1.0e-32 144.1 107 67.3
SalBow4G2286 Salvia bowleyana HOM05D007220 ORTHO05D009058 1.0e-32 144.1 165 54.5
Migut.F00451 Erythranthe guttata HOM05D007220 ORTHO05D009058 1.3e-32 143.7 96 70.8
Nitab4.5_0000072g0560 Nicotiana tabacum HOM05D007220 ORTHO05D009058 1.7e-32 143.3 111 63.1
Phvul.011G004500 Phaseolus vulgaris HOM05D007220 ORTHO05D009058 1.7e-32 143.3 156 52.6
Lsat_1_v5_gn_8_9340 Lactuca sativa HOM05D007220 ORTHO05D009058 2.3e-32 142.9 163 53.4
EL10Ac3g05813 Beta vulgaris HOM05D007220 ORTHO05D009058 3.0e-32 142.5 144 55.6
Sopen03g023380 Solanum pennellii HOM05D007220 ORTHO05D009058 6.6e-32 141.4 105 64.8
Aqoxy7G00673 Aquilegia oxysepala HOM05D007220 ORTHO05D009058 1.9e-31 139.8 128 54.7
CAN.G152.17 Capsicum annuum HOM05D007220 ORTHO05D009058 3.3e-31 139.0 104 64.4
Aa31LG3G7960 Aethionema arabicum HOM05D007220 ORTHO05D009058 5.6e-31 138.3 163 52.1
CDE09G0763 Ceratophyllum demersum HOM05D007220 ORTHO05D009058 7.3e-31 137.9 133 54.9
AUR62016183 Chenopodium quinoa HOM05D007220 ORTHO05D009058 2.8e-30 136.0 160 52.5
ECA233G2338 Erigeron canadensis HOM05D007220 ORTHO05D009058 3.6e-30 135.6 154 50.6
Lj8A39T34 Lonicera japonica HOM05D007220 ORTHO05D009058 1.4e-29 133.7 132 62.9
PSO782G3417 Papaver somniferum HOM05D007220 ORTHO05D009058 2.2e-27 126.3 110 56.4
PSO478G4327 Papaver somniferum HOM05D007220 ORTHO05D009058 1.1e-26 124.0 110 54.5
HPP92_002073 Vanilla planifolia HOM05D007220 ORTHO05D009058 1.4e-26 123.6 101 56.4
arahy.Tifrunner.gnm1.ann1.83G6QR Arachis hypogaea HOM05D007220 ORTHO05D009058 7.1e-26 121.3 80 70.0
Prupe.2G280700 Prunus persica HOM05D007220 ORTHO05D009058 1.3e-24 117.1 126 55.6
Zm00001eb230760 Zea mays HOM05D007220 ORTHO05D009058 5.1e-24 115.2 148 43.2
SEGI_29714 Sequoiadendron giganteum HOM05D007220 ORTHO05D009058 9.6e-23 110.9 145 47.6
PGSC0003DMG400023001 Solanum tuberosum HOM05D007220 ORTHO05D009058 4.8e-22 108.6 172 39.0
Potri.012G128000 Populus trichocarpa HOM05D007220 ORTHO05D009058 1.1e-21 107.5 174 46.0
TPR.G15117 Trifolium pratense HOM05D007220 ORTHO05D009058 1.8e-21 106.7 73 69.9
ATR0730G016 Amborella trichopoda HOM05D007220 ORTHO05D009058 7.6e-20 101.3 108 50.9
Pp3c26_11240 Physcomitrium patens HOM05D007220 ORTHO05D009058 2.7e-17 92.8 117 46.2
AUR62035102 Chenopodium quinoa HOM05D007220 ORTHO05D009058 7.9e-17 91.3 186 39.2
MD07G1256600 Malus domestica HOM05D007220 ORTHO05D009058 7.9e-17 91.3 53 75.5
FAN17G2597 Fragaria x ananassa HOM05D007220 ORTHO05D009058 3.0e-16 89.4 109 53.2
DCAR_009422 Daucus carota HOM05D007220 ORTHO05D009058 5.1e-16 88.6 120 46.7
DCAR_009423 Daucus carota HOM05D007220 ORTHO05D009058 5.1e-16 88.6 120 46.7
AagrBONN_evm.TU.Sc2ySwM_228.5821 Anthoceros agrestis HOM05D007220 ORTHO05D009058 1.3e-14 84.0 89 50.6
MBI12_g20320_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 2.4e-13 79.7 44 75.0
Mapoly0002s0242 Marchantia polymorpha HOM05D007220 ORTHO05D009058 4.1e-13 79.0 91 45.1
TAR629G2293 Trochodendron aralioides HOM05D007220 ORTHO05D009058 4.1e-13 79.0 95 49.5
Ca_20051_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 9.0e-13 77.8 106 46.2
Sed0003033 Sechium edule HOM05D007220 ORTHO05D009058 1.2e-12 77.4 125 45.6
HanXRQChr04g0107801 Helianthus annuus HOM05D000901 ORTHO05D001160 1.9e-10 70.1 150 34.0
MBI12_g14970_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 3.5e-09 65.9 58 58.6
MBI12_g25331_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 7.9e-09 64.7 61 55.7


User provided reference genes

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