Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN01G2607 Fragaria x ananassa HOM05D000986 ORTHO05D000794 4.7e-31 137.1 64 100.0
FAN03G1256 Fragaria x ananassa HOM05D000986 ORTHO05D000794 4.3e-16 87.4 42 95.2
FAN10G0340 Fragaria x ananassa HOM05D000986 ORTHO05D000794 3.6e-15 84.3 41 92.7
FvH4_7g01840 Fragaria vesca HOM05D000986 ORTHO05D000794 4.7e-15 84.0 41 92.7
FAN06G1695 Fragaria x ananassa HOM05D000986 ORTHO05D000794 4.7e-15 84.0 41 92.7
Dinv07426 Davidia involucrata HOM05D000986 ORTHO05D000794 4.1e-11 70.9 42 73.8
Gohir.D12G103300 Gossypium hirsutum HOM05D000986 ORTHO05D000794 1.2e-10 69.3 37 83.8
Cfa010824 Carpinus fangiana HOM05D000986 ORTHO05D000794 1.6e-10 68.9 38 76.3
Eucgr.G03282 Eucalyptus grandis HOM05D000986 ORTHO05D000794 2.7e-10 68.2 35 85.7
Gorai.008G112300 Gossypium raimondii HOM05D000986 ORTHO05D000794 2.7e-10 68.2 37 81.1
Atru.chr11.2542 Acer truncatum HOM05D000986 ORTHO05D000794 3.5e-10 67.8 41 70.7
Gohir.A12G100300 Gossypium hirsutum HOM05D000986 ORTHO05D000794 3.5e-10 67.8 37 81.1
CiPaw.14G003900 Carya illinoinensis HOM05D000986 ORTHO05D000794 6.0e-10 67.0 37 75.7
TWI09G1595 Tripterygium wilfordii HOM05D000986 ORTHO05D000794 7.8e-10 66.6 37 75.7
COL.COLO4_12329 Corchorus olitorius HOM05D000986 ORTHO05D000794 1.3e-09 65.9 42 69.0
EL10Ac5g10517 Beta vulgaris HOM05D000986 ORTHO05D000794 2.3e-09 65.1 38 76.3
AUR62032301 Chenopodium quinoa HOM05D000986 ORTHO05D000794 5.0e-09 63.9 41 70.7
Haze_03130 Corylus avellana HOM05D000986 ORTHO05D000794 5.0e-09 63.9 37 75.7
Prupe.2G024500 Prunus persica HOM05D000986 ORTHO05D000794 5.0e-09 63.9 42 61.9
Sc14g0004960 Simmondsia chinensis HOM05D000986 ORTHO05D000794 5.0e-09 63.9 36 75.0
TAR636G1666 Trochodendron aralioides HOM05D000986 ORTHO05D000794 6.6e-09 63.5 37 70.3
CANSAT80G0072 Cannabis sativa HOM05D000986 ORTHO05D000794 8.6e-09 63.2 37 73.0
QL04p010481 Quercus lobata HOM05D000986 ORTHO05D000794 8.6e-09 63.2 37 73.0
Hund31461 Selenicereus undatus HOM05D000986 ORTHO05D000794 8.6e-09 63.2 44 68.2
GSVIVG01001440001 Vitis vinifera HOM05D000986 ORTHO05D000794 1.1e-08 62.8 36 72.2
Potri.009G055500 Populus trichocarpa HOM05D000986 ORTHO05D000794 1.5e-08 62.4 38 73.7
Thecc.01G404300 Theobroma cacao HOM05D000986 ORTHO05D000794 1.5e-08 62.4 42 64.3
Cpa.g.sc125.57 Carica papaya HOM05D000986 ORTHO05D000794 1.9e-08 62.0 34 79.4
Sabra09G0040600 Salix brachista HOM05D000986 ORTHO05D000794 1.9e-08 62.0 38 73.7
MD07G1024800 Malus domestica HOM05D000986 ORTHO05D000794 2.5e-08 61.6 37 70.3
arahy.Tifrunner.gnm1.ann1.9T2EYF Arachis hypogaea HOM05D000986 ORTHO05D000794 4.3e-08 60.8 42 64.3
HanXRQChr17g0563121 Helianthus annuus HOM05D000986 ORTHO05D000794 4.3e-08 60.8 36 69.4
Oeu051419.1 Olea europaea HOM05D000986 ORTHO05D000794 4.3e-08 60.8 36 69.4
ClCG09G004470 Citrullus lanatus HOM05D000986 ORTHO05D000794 7.3e-08 60.1 36 66.7
Migut.N01804 Erythranthe guttata HOM05D000986 ORTHO05D000794 7.3e-08 60.1 38 65.8
Lj3g0002168 Lotus japonicus HOM05D000986 ORTHO05D000794 9.5e-08 59.7 41 63.4
Nn7g36347 Nelumbo nucifera HOM05D000986 ORTHO05D000794 9.5e-08 59.7 34 70.6
Ca_26318_v3 Cicer arietinum L. HOM05D000986 ORTHO05D000794 1.2e-07 59.3 42 64.3
MELO3C023589.2 Cucumis melo HOM05D000986 ORTHO05D000794 1.2e-07 59.3 36 69.4
CsaV3_7G030670 Cucumis sativus L. HOM05D000986 ORTHO05D000794 1.2e-07 59.3 36 69.4
Manes.07G011800 Manihot esculenta HOM05D000986 ORTHO05D000794 1.2e-07 59.3 36 72.2
PSO135G0164 Papaver somniferum HOM05D000986 ORTHO05D000794 1.2e-07 59.3 42 61.9
Lsat_1_v5_gn_4_32020 Lactuca sativa HOM05D000986 ORTHO05D000794 1.6e-07 58.9 40 60.0
Hund09527 Selenicereus undatus HOM05D030513 ORTHO05D000794 1.6e-07 58.9 44 63.6
Medtr0003s0630 Medicago truncatula HOM05D000986 ORTHO05D000794 2.8e-07 58.2 37 67.6
DCAR_001920 Daucus carota HOM05D000986 ORTHO05D000794 3.6e-07 57.8 36 69.4
PSO384G4291 Papaver somniferum HOM05D000986 ORTHO05D000794 3.6e-07 57.8 42 57.1
arahy.Tifrunner.gnm1.ann1.KSBN30 Arachis hypogaea HOM05D000986 ORTHO05D000794 4.7e-07 57.4 37 70.3
Os07g0657100 Oryza sativa ssp. japonica HOM05D000986 ORTHO05D000794 6.2e-07 57.0 41 53.7
PGR142G0875 Punica granatum HOM05D000986 ORTHO05D000794 1.1e-06 56.2 34 64.7
ECA234G2712 Erigeron canadensis HOM05D000986 ORTHO05D000794 1.8e-06 55.5 37 56.8
CDE02G2579 Ceratophyllum demersum HOM05D002567 ORTHO05D007435 2.3e-06 55.1 36 63.9
Nitab4.5_0002888g0020 Nicotiana tabacum HOM05D000986 ORTHO05D000794 2.3e-06 55.1 34 67.6
PGSC0003DMG400006834 Solanum tuberosum HOM05D000986 ORTHO05D000794 2.3e-06 55.1 40 55.0
Solyc01g088010.1 Solanum lycopersicum HOM05D000986 ORTHO05D000794 4.0e-06 54.3 37 59.5
Nitab4.5_0006695g0050 Nicotiana tabacum HOM05D000986 ORTHO05D000794 6.8e-06 53.5 34 61.8


User provided reference genes

Program Settings