Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN01G2533 Fragaria x ananassa HOM05D002866 ORTHO05D008929 3.1e-33 144.4 68 100.0
FAN06G4646 Fragaria x ananassa HOM05D002866 ORTHO05D008929 1.7e-23 112.1 54 98.1
Cfa013559 Carpinus fangiana HOM05D002866 ORTHO05D008929 5.0e-23 110.5 53 98.1
Haze_22179 Corylus avellana HOM05D002866 ORTHO05D000055 5.0e-23 110.5 53 98.1
FvH4_7g27050 Fragaria vesca HOM05D002866 ORTHO05D008929 5.0e-23 110.5 53 98.1
FAN03G0702 Fragaria x ananassa HOM05D002866 ORTHO05D008929 5.0e-23 110.5 53 98.1
FAN10G2637 Fragaria x ananassa HOM05D002866 ORTHO05D008929 5.0e-23 110.5 53 98.1
QL05p020902 Quercus lobata HOM05D002866 ORTHO05D008929 5.0e-23 110.5 53 98.1
RcHm_v2.0_Chr1g0373871 Rosa chinensis HOM05D002866 ORTHO05D008929 5.0e-23 110.5 53 98.1
vmacro22348 Vaccinium macrocarpon HOM05D002866 ORTHO05D008929 1.5e-22 109.0 53 94.3
Prupe.2G273700 Prunus persica HOM05D002866 ORTHO05D008929 2.5e-22 108.2 53 94.3
MD07G1250300 Malus domestica HOM05D002866 ORTHO05D008929 3.2e-22 107.8 53 96.2
Rhsim03G0162900 Rhododendron simsii HOM05D002866 ORTHO05D008929 4.2e-22 107.5 53 92.5
CiPaw.07G051200 Carya illinoinensis HOM05D002866 ORTHO05D008929 5.5e-22 107.1 53 94.3
Dinv06581 Davidia involucrata HOM05D002866 ORTHO05D008706 5.5e-22 107.1 55 87.3
CSS0005256 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008929 7.2e-22 106.7 53 92.5
CSS0048324 Camellia sinensis var. sinensis HOM05D002866 ORTHO05D008929 7.2e-22 106.7 53 92.5
Lj1A976T81 Lonicera japonica HOM05D002866 ORTHO05D008929 7.2e-22 106.7 53 90.6
QL05p021044 Quercus lobata HOM05D002866 ORTHO05D008929 7.2e-22 106.7 53 96.2
Potri.014G191900 Populus trichocarpa HOM05D002866 ORTHO05D008929 9.4e-22 106.3 53 92.5
TWI14G1303 Tripterygium wilfordii HOM05D002866 ORTHO05D008929 9.4e-22 106.3 53 90.6
GSVIVG01013991001 Vitis vinifera HOM05D002866 ORTHO05D008929 9.4e-22 106.3 53 92.5
TAR629G2248 Trochodendron aralioides HOM05D002866 ORTHO05D008929 1.2e-21 105.9 53 92.5
unitig_60.g25662 Utricularia gibba HOM05D002866 ORTHO05D008929 1.2e-21 105.9 53 92.5
Thecc.03G150200 Theobroma cacao HOM05D002866 ORTHO05D008929 1.6e-21 105.5 53 94.3
Actinidia13601 Actinidia chinensis HOM05D002866 ORTHO05D008929 2.1e-21 105.1 53 90.6
Sabra14G0144000 Salix brachista HOM05D002866 ORTHO05D008929 2.1e-21 105.1 53 90.6
Cpa.g.sc13.272 Carica papaya HOM05D002866 ORTHO05D008929 2.7e-21 104.8 53 92.5
Peaxi162Scf00271g00827 Petunia axillaris HOM05D002866 ORTHO05D008929 2.7e-21 104.8 53 84.9
Migut.F01192 Erythranthe guttata HOM05D002866 ORTHO05D008929 3.6e-21 104.4 53 88.7
Atru.chr1.858_Atru.chr1.859 Acer truncatum HOM05D002866 ORTHO05D008929 4.7e-21 104.0 53 90.6
Dinv06583 Davidia involucrata HOM05D002866 ORTHO05D008929 4.7e-21 104.0 53 88.7
PSO063G6150 Papaver somniferum HOM05D002866 ORTHO05D008929 4.7e-21 104.0 53 84.9
PGR042G0411 Punica granatum HOM05D002866 ORTHO05D008929 4.7e-21 104.0 53 90.6
Sed0016729 Sechium edule HOM05D002866 ORTHO05D008929 4.7e-21 104.0 53 88.7
GSVIVG01013994001 Vitis vinifera HOM05D002866 ORTHO05D008929 4.7e-21 104.0 53 90.6
GSVIVG01013998001 Vitis vinifera HOM05D002866 ORTHO05D008929 4.7e-21 104.0 53 90.6
Duzib084G0424 Durio zibethinus HOM05D002866 ORTHO05D008929 1.0e-20 102.8 53 88.7
Gohir.A12G197100 Gossypium hirsutum HOM05D002866 ORTHO05D008929 1.4e-20 102.4 53 90.6
Gohir.D12G199700 Gossypium hirsutum HOM05D002866 ORTHO05D008929 1.4e-20 102.4 53 90.6
Gorai.008G214900 Gossypium raimondii HOM05D002866 ORTHO05D008929 1.4e-20 102.4 53 90.6
Phvul.005G009200 Phaseolus vulgaris HOM05D002866 ORTHO05D008929 1.4e-20 102.4 74 67.6
Actinidia24979 Actinidia chinensis HOM05D002866 ORTHO05D008929 1.8e-20 102.1 53 84.9
Glyma.06G317300 Glycine max HOM05D002866 ORTHO05D008929 1.8e-20 102.1 53 86.8
MBI04_g34103_MAGBIO Magnolia biondii HOM05D002866 ORTHO05D008929 1.8e-20 102.1 53 86.8
Aqoxy3G02801 Aquilegia oxysepala HOM05D002866 ORTHO05D008929 2.3e-20 101.7 53 86.8
CANSAT56G0775 Cannabis sativa HOM05D002866 ORTHO05D008929 2.3e-20 101.7 53 90.6
Lj3g0001933 Lotus japonicus HOM05D002866 ORTHO05D008929 2.3e-20 101.7 53 86.8
Oeu021694.1 Olea europaea HOM05D002866 ORTHO05D008929 2.3e-20 101.7 53 86.8
Hund11848 Selenicereus undatus HOM05D002866 ORTHO05D008929 2.3e-20 101.7 53 86.8
Hund11850 Selenicereus undatus HOM05D002866 ORTHO05D008929 2.3e-20 101.7 53 86.8
AUR62002233 Chenopodium quinoa HOM05D002866 ORTHO05D008929 3.0e-20 101.3 53 86.8
Medtr3g008180 Medicago truncatula HOM05D002866 ORTHO05D008929 3.0e-20 101.3 53 86.8
Nn6g33860 Nelumbo nucifera HOM05D002866 ORTHO05D008929 3.0e-20 101.3 53 83.0
SalBow2G0523 Salvia bowleyana HOM05D002866 ORTHO05D008929 3.0e-20 101.3 53 84.9
TPR.G12157 Trifolium pratense HOM05D002866 ORTHO05D008929 4.0e-20 100.9 53 86.8
Nitab4.5_0002346g0020 Nicotiana tabacum HOM05D002866 ORTHO05D008929 5.2e-20 100.5 53 84.9
Solyc03g093440.4 Solanum lycopersicum HOM05D002866 ORTHO05D008929 6.8e-20 100.1 53 81.1
Sopen03g024270 Solanum pennellii HOM05D002866 ORTHO05D008929 6.8e-20 100.1 53 81.1
PGSC0003DMG400018851 Solanum tuberosum HOM05D002866 ORTHO05D008929 6.8e-20 100.1 53 81.1
EL10Ac3g05868 Beta vulgaris HOM05D002866 ORTHO05D008929 8.8e-20 99.8 53 84.9
COL.COLO4_14062 Corchorus olitorius HOM05D002866 ORTHO05D008929 8.8e-20 99.8 53 86.8
THA.LOC104818311 Tarenaya hassleriana HOM05D002866 ORTHO05D008929 8.8e-20 99.8 53 86.8
AUR62015445 Chenopodium quinoa HOM05D002866 ORTHO05D008929 1.2e-19 99.4 53 84.9
VMungo1080G1351 Vigna mungo HOM05D002866 ORTHO05D008929 1.2e-19 99.4 74 64.9
Manes.06G132400 Manihot esculenta HOM05D002866 ORTHO05D008929 1.5e-19 99.0 53 84.9
SGA_v2.0_scaffold56G19920 Striga asiatica HOM05D002866 ORTHO05D008929 1.5e-19 99.0 53 84.9
Ca_14047_v3 Cicer arietinum L. HOM05D002866 ORTHO05D008929 2.0e-19 98.6 53 83.0
Cc02_g04590 Coffea canephora HOM05D002866 ORTHO05D008929 2.0e-19 98.6 53 83.0
Zm00001eb074820 Zea mays HOM05D002866 ORTHO05D008929 2.0e-19 98.6 53 83.0
Aa31LG11G1880 Aethionema arabicum HOM05D002866 ORTHO05D008929 2.6e-19 98.2 55 80.0
Eucgr.A02913 Eucalyptus grandis HOM05D002866 ORTHO05D008929 2.6e-19 98.2 53 83.0
Os04g0549300 Oryza sativa ssp. japonica HOM05D002866 ORTHO05D008929 2.6e-19 98.2 53 86.8
Psat5g228760 Pisum sativum HOM05D002866 ORTHO05D008929 3.4e-19 97.8 53 84.9
Ciclev10005302m.g Citrus clementina HOM05D002866 ORTHO05D008929 4.4e-19 97.4 53 86.8
CsaV3_4G004140 Cucumis sativus L. HOM05D002866 ORTHO05D008929 4.4e-19 97.4 53 83.0
Lsat_1_v5_gn_2_127761 Lactuca sativa HOM05D002866 ORTHO05D008929 4.4e-19 97.4 53 79.2
ECA238G1321 Erigeron canadensis HOM05D002866 ORTHO05D008929 5.7e-19 97.1 53 79.2
CAN.G485.17 Capsicum annuum HOM05D002866 ORTHO05D008929 9.7e-19 96.3 53 75.5
Sc13g0007920 Simmondsia chinensis HOM05D002866 ORTHO05D008929 9.7e-19 96.3 53 83.0
Ah.07g207570 Amaranthus hybridus HOM05D002866 ORTHO05D008929 2.2e-18 95.1 53 77.4
A03p47120 Brassica napus HOM05D002866 ORTHO05D008929 2.2e-18 95.1 53 81.1
BraA03t13840Z Brassica rapa HOM05D002866 ORTHO05D008929 2.2e-18 95.1 53 81.1
C07p45230 Brassica napus HOM05D002866 ORTHO05D008929 2.8e-18 94.7 53 81.1
BolC7t45046H Brassica oleracea HOM05D002866 ORTHO05D008929 2.8e-18 94.7 53 81.1
AL8G38240 Arabidopsis lyrata HOM05D002866 ORTHO05D008929 4.8e-18 94.0 53 81.1
Pp3c27_3290 Physcomitrium patens HOM05D002866 ORTHO05D008929 4.8e-18 94.0 53 79.2
HanXRQChr14g0461261 Helianthus annuus HOM05D002866 ORTHO05D008929 6.3e-18 93.6 53 79.2
AT5G61540 Arabidopsis thaliana HOM05D002866 ORTHO05D008929 1.1e-17 92.8 53 81.1
Lalb_Chr15g0079681 Lupinus albus HOM05D002866 ORTHO05D008929 1.8e-17 92.0 53 81.1
Sp2g24740 Schrenkiella parvula HOM05D002866 ORTHO05D008929 1.8e-17 92.0 53 81.1
Carub.0008s2223 Capsella rubella HOM05D002866 ORTHO05D008929 2.4e-17 91.7 53 81.1
CBR_g51802 Chara braunii HOM05D002866 ORTHO05D000301 2.4e-17 91.7 54 74.1
Thhalv10004474m.g Eutrema salsugineum HOM05D002866 ORTHO05D008929 2.4e-17 91.7 53 81.1
Nitab4.5_0001267g0010 Nicotiana tabacum HOM05D002866 ORTHO05D008929 2.4e-17 91.7 49 81.6
CARHR275310 Cardamine hirsuta HOM05D002866 ORTHO05D008929 3.1e-17 91.3 53 81.1
HPP92_021029 Vanilla planifolia HOM05D002866 ORTHO05D008929 5.3e-17 90.5 53 79.2
HPP92_027439 Vanilla planifolia HOM05D002866 ORTHO05D008929 7.0e-17 90.1 53 79.2
Mapoly0043s0091 Marchantia polymorpha HOM05D002866 ORTHO05D008929 2.0e-16 88.6 53 75.5
SMO115G0123 Selaginella moellendorffii HOM05D002866 ORTHO05D008929 2.2e-15 85.1 53 73.6
AagrBONN_evm.TU.Sc2ySwM_228.4013 Anthoceros agrestis HOM05D002866 ORTHO05D008929 5.0e-15 84.0 53 71.7
AL365U10020 Arabidopsis lyrata HOM05D002866 ORTHO05D008929 1.5e-14 82.4 47 78.7
arahy.Tifrunner.gnm1.ann1.DW86GH Arachis hypogaea HOM05D002866 ORTHO05D008929 5.2e-12 73.9 65 56.9


User provided reference genes

Program Settings