Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN01G2488 Fragaria x ananassa HOM05D006055 ORTHO05D007480 4.8e-202 707.6 350 100.0
FAN10G0847 Fragaria x ananassa HOM05D006055 ORTHO05D007480 7.1e-198 693.7 350 98.0
FAN06G3912 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.1e-195 686.4 350 97.4
FAN10G2268 Fragaria x ananassa HOM05D006055 ORTHO05D007480 2.1e-194 682.2 373 92.2
FvH4_7g10160 Fragaria vesca HOM05D006055 ORTHO05D007480 4.2e-190 667.9 350 95.4
RcHm_v2.0_Chr1g0347871 Rosa chinensis HOM05D006055 ORTHO05D007480 5.5e-182 641.0 350 91.1
FAN03G3321 Fragaria x ananassa HOM05D006055 ORTHO05D007480 1.5e-179 632.9 351 90.0
FAN06G2084 Fragaria x ananassa HOM05D006055 ORTHO05D007480 3.1e-177 625.2 376 85.9
Prupe.2G131200 Prunus persica HOM05D006055 ORTHO05D007480 9.4e-166 587.0 351 82.6
MD07G1108400 Malus domestica HOM05D006055 ORTHO05D007480 6.3e-162 574.3 350 82.9
GSVIVG01018274001 Vitis vinifera HOM05D006055 ORTHO05D007480 6.1e-157 557.8 348 79.6
Hma1.2p1_0009F.1_g005960 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 1.0e-156 557.0 352 78.7
CSS0024076 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 1.4e-156 556.6 352 77.8
Duzib138G0472 Durio zibethinus HOM05D006055 ORTHO05D007480 2.0e-155 552.7 352 79.0
COL.COLO4_12412 Corchorus olitorius HOM05D006055 ORTHO05D007480 2.6e-155 552.4 351 78.9
Thecc.01G394500 Theobroma cacao HOM05D006055 ORTHO05D007480 5.7e-155 551.2 351 78.6
Gohir.A08G029400 Gossypium hirsutum HOM05D006055 ORTHO05D007480 7.4e-155 550.8 351 79.2
QL04p030364 Quercus lobata HOM05D006055 ORTHO05D007480 3.7e-154 548.5 349 77.7
CANSAT21G1956 Cannabis sativa HOM05D006055 ORTHO05D007480 1.1e-153 547.0 332 80.4
CANSAT21G1800 Cannabis sativa HOM05D006055 ORTHO05D007480 1.4e-153 546.6 332 80.4
TWI14G0600 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 1.4e-153 546.6 347 78.7
Atru.chr5.130 Acer truncatum HOM05D006055 ORTHO05D007480 5.3e-153 544.7 329 82.7
Ciclev10021096m.g Citrus clementina HOM05D006055 ORTHO05D007480 2.6e-152 542.3 337 80.4
CiPaw.13G026500 Carya illinoinensis HOM05D006055 ORTHO05D007480 4.5e-152 541.6 352 76.4
Manes.05G054600 Manihot esculenta HOM05D006055 ORTHO05D007480 1.3e-151 540.0 352 77.0
Sed0027680 Sechium edule HOM05D006055 ORTHO05D007480 3.8e-151 538.5 341 77.7
Potri.014G047300 Populus trichocarpa HOM05D006055 ORTHO05D007480 5.0e-151 538.1 336 79.5
Gorai.004G039000 Gossypium raimondii HOM05D006055 ORTHO05D007480 6.5e-151 537.7 393 71.5
TAR375G0976 Trochodendron aralioides HOM05D006055 ORTHO05D007480 6.5e-151 537.7 348 76.4
PGR004G2446 Punica granatum HOM05D006055 ORTHO05D007480 8.5e-151 537.3 353 76.8
Actinidia12146 Actinidia chinensis HOM05D006055 ORTHO05D007480 2.5e-150 535.8 335 77.9
Gohir.D08G040100 Gossypium hirsutum HOM05D006055 ORTHO05D007480 5.5e-150 534.6 392 71.4
MELO3C022277.2 Cucumis melo HOM05D006055 ORTHO05D007480 6.1e-149 531.2 336 77.1
Nitab4.5_0000920g0150 Nicotiana tabacum HOM05D006055 ORTHO05D007480 6.1e-149 531.2 338 76.6
Nn1g00856 Nelumbo nucifera HOM05D006055 ORTHO05D007480 1.8e-148 529.6 351 74.6
Sopen01g036070 Solanum pennellii HOM05D006055 ORTHO05D007480 2.3e-148 529.3 336 76.8
SGA_v2.0_scaffold43G16538 Striga asiatica HOM05D006055 ORTHO05D007480 2.3e-148 529.3 348 75.6
ECA240G2571 Erigeron canadensis HOM05D006055 ORTHO05D007480 3.0e-148 528.9 346 76.9
Eucgr.D01230 Eucalyptus grandis HOM05D006055 ORTHO05D007480 3.0e-148 528.9 336 78.0
MSTRG.28152 Avicennia marina HOM05D006055 ORTHO05D007480 4.0e-148 528.5 337 77.2
Nitab4.5_0013736g0020 Nicotiana tabacum HOM05D006055 ORTHO05D007480 4.0e-148 528.5 348 74.7
CAN.G1473.12 Capsicum annuum HOM05D006055 ORTHO05D007480 5.2e-148 528.1 351 74.4
Solyc01g090280.4 Solanum lycopersicum HOM05D006055 ORTHO05D007480 1.2e-147 526.9 336 76.5
CARHR000230 Cardamine hirsuta HOM05D006055 ORTHO05D007480 1.5e-147 526.6 352 75.0
PGR144G0002 Punica granatum HOM05D006055 ORTHO05D007480 1.5e-147 526.6 331 78.2
CsaV3_6G008610 Cucumis sativus L. HOM05D006055 ORTHO05D007480 2.6e-147 525.8 336 76.8
Rhsim07G0035700 Rhododendron simsii HOM05D006055 ORTHO05D007480 5.7e-147 524.6 347 76.1
Cpa.g.sc101.4 Carica papaya HOM05D006055 ORTHO05D007480 7.5e-147 524.2 339 76.7
vmacro13494 Vaccinium macrocarpon HOM05D006055 ORTHO05D007480 9.7e-147 523.9 311 82.6
Dinv43619 Davidia involucrata HOM05D006055 ORTHO05D007480 2.2e-146 522.7 307 82.4
BcaC07g42339 Brassica carinata HOM05D006055 ORTHO05D007480 4.8e-146 521.5 346 75.1
Glyma.18G252000 Glycine max HOM05D006055 ORTHO05D007480 4.8e-146 521.5 328 78.0
Lj1g0005705 Lotus japonicus HOM05D006055 ORTHO05D007480 4.8e-146 521.5 340 76.5
HanXRQChr13g0423211 Helianthus annuus HOM05D006055 ORTHO05D007480 1.1e-145 520.4 347 74.9
Peaxi162Scf00475g00522 Petunia axillaris HOM05D006055 ORTHO05D007480 1.8e-145 519.6 350 74.3
arahy.Tifrunner.gnm1.ann1.JP1X2J Arachis hypogaea HOM05D006055 ORTHO05D007480 2.4e-145 519.2 349 73.4
Sp1g00170 Schrenkiella parvula HOM05D006055 ORTHO05D007480 2.4e-145 519.2 352 72.7
arahy.Tifrunner.gnm1.ann1.C7FV9J Arachis hypogaea HOM05D006055 ORTHO05D007480 3.1e-145 518.8 349 73.4
Lalb_Chr13g0290591 Lupinus albus HOM05D006055 ORTHO05D007480 3.1e-145 518.8 332 77.1
CSS0048269 Camellia sinensis var. sinensis HOM05D006055 ORTHO05D007480 4.1e-145 518.5 325 77.8
AL1G10130 Arabidopsis lyrata HOM05D006055 ORTHO05D007480 5.3e-145 518.1 346 74.0
Sabra14G0034300 Salix brachista HOM05D006055 ORTHO05D007480 5.3e-145 518.1 335 76.7
Psat0s3739g0040 Pisum sativum HOM05D006055 ORTHO05D007480 1.6e-144 516.5 325 77.2
Carub.0001s0012 Capsella rubella HOM05D006055 ORTHO05D007480 4.5e-144 515.0 346 73.4
Thhalv10008126m.g Eutrema salsugineum HOM05D006055 ORTHO05D007480 4.5e-144 515.0 336 75.9
Ca_08070_v3 Cicer arietinum L. HOM05D006055 ORTHO05D007480 7.7e-144 514.2 325 77.5
BcaC07g42437 Brassica carinata HOM05D006055 ORTHO05D007480 1.7e-143 513.1 349 73.9
TPR.G14105 Trifolium pratense HOM05D006055 ORTHO05D007480 2.2e-143 512.7 336 75.3
Glyma.13G187100 Glycine max HOM05D006055 ORTHO05D007480 2.9e-143 512.3 327 75.8
Medtr7g081715 Medicago truncatula HOM05D006055 ORTHO05D007480 8.5e-143 510.8 337 75.1
AT1G02100 Arabidopsis thaliana HOM05D006055 ORTHO05D007480 1.9e-142 509.6 346 73.7
PSO063G7218 Papaver somniferum HOM05D006055 ORTHO05D007480 8.0e-141 504.2 343 74.6
CDE06G0143 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 3.0e-140 502.3 338 74.0
Migut.N01738 Erythranthe guttata HOM05D006055 ORTHO05D007480 3.0e-140 502.3 320 76.9
PSO832G3098 Papaver somniferum HOM05D006055 ORTHO05D007480 5.2e-140 501.5 343 74.3
Cc02_g25090 Coffea canephora HOM05D006055 ORTHO05D007480 2.4e-137 492.7 312 78.2
SGA_v2.0_scaffold116G32294 Striga asiatica HOM05D006055 ORTHO05D007480 7.7e-136 487.6 375 67.5
BraA09t42280Z Brassica rapa HOM05D006055 ORTHO05D007480 1.3e-135 486.9 361 69.8
A09p69350 Brassica napus HOM05D006055 ORTHO05D007480 2.9e-135 485.7 363 68.9
BolC8t52925H Brassica oleracea HOM05D006055 ORTHO05D007480 2.9e-135 485.7 363 68.9
Lsat_1_v5_gn_3_127241 Lactuca sativa HOM05D006055 ORTHO05D007480 2.9e-135 485.7 344 70.9
Ah.16g103830 Amaranthus hybridus HOM05D006055 ORTHO05D007480 4.2e-134 481.9 338 71.0
Aqoxy7G00862 Aquilegia oxysepala HOM05D006055 ORTHO05D007480 1.8e-132 476.5 309 76.7
Cfa011074 Carpinus fangiana HOM05D006055 ORTHO05D007480 8.9e-132 474.2 291 79.4
SalBow5G1596 Salvia bowleyana HOM05D006055 ORTHO05D007480 2.6e-131 472.6 391 62.1
Phvul.011G190400 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 3.4e-131 472.2 340 70.9
Duzib133G1573 Durio zibethinus HOM05D006055 ORTHO05D007480 9.8e-131 470.7 303 78.2
Os06g0140100 Oryza sativa ssp. japonica HOM05D006055 ORTHO05D007480 1.2e-128 463.8 319 71.5
Oeu011253.1 Olea europaea HOM05D006055 ORTHO05D007480 3.5e-128 462.2 284 78.5
Lj9C557T10 Lonicera japonica HOM05D006055 ORTHO05D007480 1.1e-126 457.2 353 68.6
MD02G1211800 Malus domestica HOM05D006055 ORTHO05D007480 1.9e-126 456.4 260 86.5
Hund17088 Selenicereus undatus HOM05D006055 ORTHO05D007480 4.3e-126 455.3 340 68.2
Hma1.2p1_0009F.1_g005970 Hydrangea macrophylla HOM05D006055 ORTHO05D007480 5.6e-126 454.9 275 80.7
AUR62013746 Chenopodium quinoa HOM05D006055 ORTHO05D007480 1.8e-124 449.9 288 76.4
Aa31LG1G11510 Aethionema arabicum HOM05D006055 ORTHO05D007480 3.0e-124 449.1 288 77.1
SalBow5G4451 Salvia bowleyana HOM05D006055 ORTHO05D007480 1.2e-123 447.2 379 62.3
Glyma.09G242700 Glycine max HOM05D006055 ORTHO05D007480 8.6e-119 431.0 281 75.1
AUR62023405 Chenopodium quinoa HOM05D006055 ORTHO05D007480 2.1e-117 426.4 347 62.8
Sc02g0003100 Simmondsia chinensis HOM05D006055 ORTHO05D007480 8.0e-117 424.5 324 68.2
EL10Ac1g00759 Beta vulgaris HOM05D006055 ORTHO05D007480 1.7e-114 416.8 286 72.7
ATR0057G026 Amborella trichopoda HOM05D006055 ORTHO05D007480 1.1e-110 404.1 319 63.0
Mapoly0013s0063 Marchantia polymorpha HOM05D006055 ORTHO05D007480 3.6e-109 399.1 323 60.4
AagrBONN_evm.TU.Sc2ySwM_344.4855 Anthoceros agrestis HOM05D006055 ORTHO05D007480 2.3e-108 396.4 332 59.9
MBI04_g33722_MAGBIO Magnolia biondii HOM05D006055 ORTHO05D007480 1.7e-106 390.2 340 62.1
TWI14G1276 Tripterygium wilfordii HOM05D006055 ORTHO05D007480 3.7e-106 389.0 233 83.3
Zm00001eb270250 Zea mays HOM05D006055 ORTHO05D007480 9.2e-105 384.4 298 64.4
SMO169G0267 Selaginella moellendorffii HOM05D006055 ORTHO05D007480 1.0e-103 380.9 323 59.1
Pp3c6_20710 Physcomitrium patens HOM05D006055 ORTHO05D007480 1.7e-103 380.2 326 58.0
Haze_02842 Corylus avellana HOM05D006055 ORTHO05D007480 1.2e-101 374.0 277 69.0
ClCG06G002510 Citrullus lanatus HOM05D006055 ORTHO05D007480 1.4e-100 370.5 286 67.8
unitig_578.g16712 Utricularia gibba HOM05D006055 ORTHO05D007480 1.9e-94 350.1 248 69.8
C08p54160 Brassica napus HOM05D006055 ORTHO05D007480 2.5e-94 349.7 269 66.9
CBR_g29813 Chara braunii HOM05D006055 ORTHO05D007480 4.0e-92 342.4 322 53.7
CDE06G0088 Ceratophyllum demersum HOM05D006055 ORTHO05D007480 1.0e-87 327.8 223 72.6
SEGI_37557 Sequoiadendron giganteum HOM05D006055 ORTHO05D007480 5.3e-84 315.5 234 65.4
ECA240G0951 Erigeron canadensis HOM05D006055 ORTHO05D007480 8.4e-82 308.1 223 71.3
Cre04.g229350 Chlamydomonas reinhardtii HOM05D006055 ORTHO05D007480 3.2e-73 279.6 366 43.7
Actinidia32500 Actinidia chinensis HOM05D006055 ORTHO05D007480 5.1e-55 219.2 181 63.5
VMungo1127G0075 Vigna mungo HOM05D006055 ORTHO05D007480 9.7e-54 214.9 140 77.9
Gohir.A09G116600 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.8e-52 210.7 143 74.1
MCO09G792 Micromonas commoda HOM05D006055 ORTHO05D007480 1.1e-49 201.4 326 38.0
SHI13615 Sapria himalayana HOM05D006055 ORTHO05D007480 1.7e-42 177.6 107 72.9
HPP92_022088 Vanilla planifolia HOM05D006055 ORTHO05D007480 2.9e-42 176.8 129 66.7
PRCOL_00000228 Prasinoderma coloniale HOM05D006055 ORTHO05D007480 8.0e-40 168.7 279 37.6
Gohir.D08G159633 Gossypium hirsutum HOM05D006055 ORTHO05D007480 1.2e-32 144.8 97 73.2
Zm00001eb438620 Zea mays HOM05D006055 ORTHO05D007480 7.7e-19 99.0 98 53.1
SHI13613 Sapria himalayana HOM05D006055 ORTHO05D007480 8.9e-15 85.5 69 59.4
MD02G1212000 Malus domestica HOM05D006055 ORTHO05D007480 4.9e-13 79.7 71 63.4
Phvul.008G046701 Phaseolus vulgaris HOM05D006055 ORTHO05D007480 1.2e-11 75.1 50 74.0


User provided reference genes

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