Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN01G2468 Fragaria x ananassa HOM05D007615 ORTHO05D009643 2.8e-103 378.6 192 100.0
FAN03G2533 Fragaria x ananassa HOM05D007615 ORTHO05D009643 2.4e-99 365.5 192 97.9
FAN06G4073 Fragaria x ananassa HOM05D007615 ORTHO05D009643 2.1e-98 362.5 184 99.5
FAN10G2819 Fragaria x ananassa HOM05D007615 ORTHO05D009643 5.1e-97 357.8 190 96.3
RcHm_v2.0_Chr1g0369501 Rosa chinensis HOM05D007615 ORTHO05D009643 1.3e-87 326.6 189 87.3
RcHm_v2.0_Chr3g0468601 Rosa chinensis HOM05D007615 ORTHO05D009643 2.1e-71 272.7 189 76.2
MD07G1214900 Malus domestica HOM05D007615 ORTHO05D009643 2.0e-61 239.6 193 65.8
Prupe.2G246900 Prunus persica HOM05D007615 ORTHO05D009643 6.5e-60 234.6 195 62.1
CiPaw.01G296100 Carya illinoinensis HOM05D007615 ORTHO05D009643 2.2e-55 219.5 196 59.7
MELO3C008283.2 Cucumis melo HOM05D007615 ORTHO05D009643 6.3e-55 218.0 197 59.9
Haze_17188 Corylus avellana HOM05D007615 ORTHO05D009643 1.3e-52 210.3 183 60.1
CsaV3_6G001660 Cucumis sativus L. HOM05D007615 ORTHO05D009643 1.3e-52 210.3 197 57.9
Sed0010184 Sechium edule HOM05D007615 ORTHO05D009643 1.4e-51 206.8 195 54.4
Cfa001360 Carpinus fangiana HOM05D007615 ORTHO05D009643 5.5e-51 204.9 157 66.9
Ciclev10032806m.g Citrus clementina HOM05D007615 ORTHO05D009643 5.5e-51 204.9 187 54.5
TWI53G1973 Tripterygium wilfordii HOM05D007615 ORTHO05D009643 5.5e-51 204.9 199 56.8
Potri.010G192300 Populus trichocarpa HOM05D007615 ORTHO05D009643 7.2e-51 204.5 191 56.5
QL08p062684 Quercus lobata HOM05D007615 ORTHO05D009643 1.2e-50 203.8 186 59.1
ClCG11G006310 Citrullus lanatus HOM05D007615 ORTHO05D009643 2.1e-50 203.0 195 53.8
COL.COLO4_24429 Corchorus olitorius HOM05D007615 ORTHO05D009643 2.7e-50 202.6 188 57.4
Sabra10G0147900 Salix brachista HOM05D007615 ORTHO05D009643 3.6e-50 202.2 191 55.5
CANSAT56G1044 Cannabis sativa HOM05D007615 ORTHO05D009643 6.1e-50 201.4 196 56.6
Eucgr.K02662 Eucalyptus grandis HOM05D007615 ORTHO05D009643 6.1e-50 201.4 194 56.7
Phvul.008G225800 Phaseolus vulgaris HOM05D007615 ORTHO05D009643 1.8e-49 199.9 196 53.1
Rhsim09G0172300 Rhododendron simsii HOM05D007615 ORTHO05D009643 6.7e-49 198.0 195 51.8
TAR636G3510 Trochodendron aralioides HOM05D007615 ORTHO05D009643 8.8e-49 197.6 196 55.1
LjContig00357g0021515 Lotus japonicus HOM05D007615 ORTHO05D009643 2.0e-48 196.4 198 51.5
Psat2g035440 Pisum sativum HOM05D007615 ORTHO05D009643 2.6e-48 196.1 195 52.3
TAR636G2052 Trochodendron aralioides HOM05D007615 ORTHO05D009643 2.6e-48 196.1 192 55.7
Ca_05936_v3 Cicer arietinum L. HOM05D007615 ORTHO05D009643 3.3e-48 195.7 194 52.1
Glyma.14G061700 Glycine max HOM05D007615 ORTHO05D009643 4.4e-48 195.3 202 54.5
PGR142G0690 Punica granatum HOM05D007615 ORTHO05D009643 9.7e-48 194.1 193 51.3
vmacro10061 Vaccinium macrocarpon HOM05D007615 ORTHO05D009643 9.7e-48 194.1 199 52.3
Gohir.A08G018800 Gossypium hirsutum HOM05D007615 ORTHO05D009643 2.2e-47 193.0 191 53.9
Atru.chr12.235 Acer truncatum HOM05D007615 ORTHO05D009643 4.8e-47 191.8 191 53.9
Gohir.D08G029400 Gossypium hirsutum HOM05D007615 ORTHO05D009643 6.3e-47 191.4 191 53.9
CSS0034825 Camellia sinensis var. sinensis HOM05D007615 ORTHO05D009643 1.1e-46 190.7 168 58.9
Manes.07G125900 Manihot esculenta HOM05D007615 ORTHO05D009643 1.1e-46 190.7 138 67.4
Thecc.09G179400 Theobroma cacao HOM05D007615 ORTHO05D009643 2.4e-46 189.5 196 53.1
Cpa.g.sc19.199 Carica papaya HOM05D007615 ORTHO05D009643 5.3e-46 188.3 194 53.6
Dinv20960 Davidia involucrata HOM05D000277 ORTHO05D000214 5.3e-46 188.3 171 59.1
Dinv20983 Davidia involucrata HOM05D000277 ORTHO05D000214 5.3e-46 188.3 171 59.1
PSO384G4204 Papaver somniferum HOM05D007615 ORTHO05D009643 5.3e-46 188.3 196 53.6
Gorai.004G026800 Gossypium raimondii HOM05D007615 ORTHO05D009643 7.0e-46 188.0 191 53.4
Duzib170G1068 Durio zibethinus HOM05D007615 ORTHO05D009643 2.0e-45 186.4 134 70.1
HanXRQChr07g0202461 Helianthus annuus HOM05D007615 ORTHO05D009643 2.0e-45 186.4 193 52.8
Lalb_Chr17g0346631 Lupinus albus HOM05D007615 ORTHO05D009643 3.4e-45 185.7 192 50.5
Medtr5g081970 Medicago truncatula HOM05D007615 ORTHO05D009643 3.4e-45 185.7 186 52.2
Sc11g0007250 Simmondsia chinensis HOM05D007615 ORTHO05D009643 4.5e-45 185.3 175 54.9
VMungo0647G1713 Vigna mungo HOM05D007615 ORTHO05D009643 7.7e-45 184.5 185 51.9
Actinidia00935 Actinidia chinensis HOM05D007615 ORTHO05D009643 2.2e-44 183.0 197 51.3
ECA238G0429 Erigeron canadensis HOM05D007615 ORTHO05D009643 2.2e-44 183.0 193 52.3
PSO339G1281 Papaver somniferum HOM05D007615 ORTHO05D009643 5.0e-44 181.8 195 51.3
Nitab4.5_0000737g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 1.1e-43 180.6 138 65.9
Nitab4.5_0001654g0050 Nicotiana tabacum HOM05D007615 ORTHO05D009643 1.1e-43 180.6 191 52.4
Psat3g208000 Pisum sativum HOM05D007615 ORTHO05D009643 1.4e-43 180.3 141 64.5
Cc02_g06860 Coffea canephora HOM05D007615 ORTHO05D009643 4.2e-43 178.7 189 51.9
Oeu063511.1 Olea europaea HOM05D007615 ORTHO05D009643 7.2e-43 177.9 137 63.5
TPR.G19858 Trifolium pratense HOM05D007615 ORTHO05D009643 7.2e-43 177.9 209 47.8
EL10Ac2g04791 Beta vulgaris HOM05D007615 ORTHO05D009643 6.7e-41 171.4 138 61.6
DCAR_012632 Daucus carota HOM05D007615 ORTHO05D009643 8.8e-41 171.0 157 58.0
Nn2g11402 Nelumbo nucifera HOM05D007615 ORTHO05D009643 4.8e-39 165.2 196 45.9
Aqoxy4G02652 Aquilegia oxysepala HOM05D007615 ORTHO05D009643 8.2e-39 164.5 193 48.2
Hund13833 Selenicereus undatus HOM05D007615 ORTHO05D009643 4.1e-38 162.2 170 53.5
Sopen04g004760 Solanum pennellii HOM05D007615 ORTHO05D009643 4.1e-38 162.2 136 60.3
Lsat_1_v5_gn_2_121681 Lactuca sativa HOM05D000277 ORTHO05D000214 5.3e-38 161.8 138 54.3
PGSC0003DMG400016017 Solanum tuberosum HOM05D007615 ORTHO05D009643 1.2e-37 160.6 137 58.4
Ah.16g103150 Amaranthus hybridus HOM05D007615 ORTHO05D009643 1.6e-37 160.2 165 50.3
SalBow6G0125 Salvia bowleyana HOM05D007615 ORTHO05D009643 6.5e-36 154.8 178 50.0
MBI14_g04425_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 1.9e-35 153.3 192 42.7
Migut.F01421 Erythranthe guttata HOM05D007615 ORTHO05D009643 7.2e-35 151.4 190 47.9
Peaxi162Scf00079g00249 Petunia axillaris HOM05D007615 ORTHO05D009643 2.7e-34 149.4 117 63.2
THA.LOC104810077 Tarenaya hassleriana HOM05D007615 ORTHO05D009643 6.1e-34 148.3 204 41.2
unitig_62.g23933 Utricularia gibba HOM05D007615 ORTHO05D009643 1.8e-33 146.7 146 55.5
Aa31LG10G10810 Aethionema arabicum HOM05D007615 ORTHO05D009643 3.3e-32 142.5 191 41.9
CARHR165930 Cardamine hirsuta HOM05D007615 ORTHO05D009643 1.1e-30 137.5 205 40.5
AL5G37110 Arabidopsis lyrata HOM05D007615 ORTHO05D009643 3.1e-30 136.0 195 43.1
A09p48810 Brassica napus HOM05D007615 ORTHO05D009643 4.1e-30 135.6 185 42.2
BraA09t40334Z Brassica rapa HOM05D007615 ORTHO05D009643 4.1e-30 135.6 185 42.2
SGA_v2.0_scaffold456G51922 Striga asiatica HOM05D002401 ORTHO05D007109 4.1e-30 135.6 177 43.5
CDE10G1314 Ceratophyllum demersum HOM05D007615 ORTHO05D009643 9.1e-30 134.4 140 46.4
Carub.0005s2260 Capsella rubella HOM05D007615 ORTHO05D009643 1.6e-29 133.7 187 41.2
BolC8t50735H Brassica oleracea HOM05D007615 ORTHO05D009643 2.7e-29 132.9 187 41.2
ATR0618G365 Amborella trichopoda HOM05D005325 ORTHO05D008457 3.5e-29 132.5 173 43.4
AT3G55820 Arabidopsis thaliana HOM05D007615 ORTHO05D009643 3.5e-29 132.5 193 39.9
C08p31140 Brassica napus HOM05D007615 ORTHO05D009643 3.5e-29 132.5 187 41.2
Sp5g06670 Schrenkiella parvula HOM05D007615 ORTHO05D009643 1.0e-28 131.0 185 39.5
Thhalv10010736m.g Eutrema salsugineum HOM05D007615 ORTHO05D009643 3.8e-28 129.0 190 41.1
Dinv34419 Davidia involucrata HOM05D007615 ORTHO05D009643 1.9e-27 126.7 192 41.7
Potri.008G065101 Populus trichocarpa HOM05D007615 ORTHO05D009643 2.5e-27 126.3 134 50.0
HPP92_006631 Vanilla planifolia HOM05D007615 ORTHO05D009643 2.5e-27 126.3 144 44.4
SGA_v2.0_scaffold304G47925 Striga asiatica HOM05D002401 ORTHO05D007109 5.5e-27 125.2 168 42.3
BcaB01g00059 Brassica carinata HOM05D007615 ORTHO05D009643 5.2e-25 118.6 191 38.7
SEGI_38309 Sequoiadendron giganteum HOM05D007615 ORTHO05D009643 2.2e-23 113.2 146 43.2
Oeu046579.1 Olea europaea HOM05D007615 ORTHO05D009643 2.3e-20 103.2 121 47.9
Nitab4.5_0002613g0100 Nicotiana tabacum HOM05D007615 ORTHO05D009643 1.1e-19 100.9 77 63.6
Mapoly0011s0100 Marchantia polymorpha HOM05D007615 ORTHO05D009643 9.5e-19 97.8 159 35.8
AagrBONN_evm.TU.Sc2ySwM_368.2678 Anthoceros agrestis HOM05D007615 ORTHO05D009643 3.4e-16 89.4 192 31.2
Pp3c3_19950 Physcomitrium patens HOM05D007615 ORTHO05D009643 7.5e-16 88.2 137 34.3
Manes.10G016915 Manihot esculenta HOM05D007615 ORTHO05D009643 3.1e-14 82.8 120 40.8
SMO139G0141 Selaginella moellendorffii HOM05D007615 ORTHO05D009643 2.3e-12 76.6 135 37.0
SMO145G0032 Selaginella moellendorffii HOM05D001529 ORTHO05D007595 2.3e-12 76.6 135 37.0


User provided reference genes

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