Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN01G2330 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.9e-227 790.4 369 100.0
FvH4_7g04610 Fragaria vesca HOM05D006732 ORTHO05D005682 6.5e-210 733.8 375 93.3
FAN06G4694 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.6e-208 729.2 375 92.5
FAN06G2841 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.2e-207 724.2 376 91.8
FAN03G3183 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.5e-206 720.3 368 93.2
FAN10G1871 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.1e-159 565.5 294 91.8
RcHm_v2.0_Chr4g0406891 Rosa chinensis HOM05D006732 ORTHO05D005682 5.9e-78 295.4 379 47.5
RcHm_v2.0_Chr1g0329851 Rosa chinensis HOM05D006732 ORTHO05D005682 4.7e-67 259.2 178 71.9
FvH4_1g03800 Fragaria vesca HOM05D006732 ORTHO05D005682 6.0e-62 242.3 418 39.5
FvH4_1g03120 Fragaria vesca HOM05D006732 ORTHO05D005682 1.0e-61 241.5 364 44.2
RcHm_v2.0_Chr2g0090681 Rosa chinensis HOM05D006732 ORTHO05D005682 1.7e-61 240.7 378 43.4
FAN19G1106 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.3e-61 240.4 429 40.1
RcHm_v2.0_Chr2g0088891 Rosa chinensis HOM05D006732 ORTHO05D005682 2.3e-61 240.4 386 42.7
FvH4_1g03650 Fragaria vesca HOM05D006732 ORTHO05D005682 6.6e-61 238.8 427 38.9
FAN18G2797 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.6e-61 238.4 406 39.7
FvH4_5g09240 Fragaria vesca HOM05D006732 ORTHO05D005682 7.3e-60 235.3 379 41.7
FAN08G0591 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.6e-59 234.2 377 41.9
FvH4_1g07310 Fragaria vesca HOM05D006732 ORTHO05D005682 1.4e-58 231.1 373 41.0
RcHm_v2.0_Chr7g0225411 Rosa chinensis HOM05D006732 ORTHO05D005682 3.4e-57 226.5 376 41.5
FvH4_1g07350 Fragaria vesca HOM05D006732 ORTHO05D005682 3.7e-56 223.0 363 40.8
RcHm_v2.0_Chr2g0090631 Rosa chinensis HOM05D006732 ORTHO05D005682 1.1e-55 221.5 381 41.5
FAN19G1623 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.2e-55 218.4 414 39.4
FAN23G1322 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.2e-54 218.0 385 40.3
FvH4_1g04650 Fragaria vesca HOM05D006732 ORTHO05D005682 1.6e-54 217.6 379 39.6
FAN19G2793 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.1e-54 217.2 410 38.8
FAN19G0447 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.7e-54 216.9 385 39.7
FvH4_1g04981 Fragaria vesca HOM05D006732 ORTHO05D005682 1.7e-53 214.2 385 39.7
FvH4_1g04870 Fragaria vesca HOM05D006732 ORTHO05D005682 3.0e-53 213.4 386 39.6
FvH4_1g04892 Fragaria vesca HOM05D006732 ORTHO05D005682 3.0e-53 213.4 386 39.6
FAN26G0545 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.1e-53 212.6 367 41.4
FAN13G2469 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.5e-52 211.1 343 41.4
FAN23G1399 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.6e-52 209.1 369 40.9
FAN23G2814 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.6e-52 209.1 369 40.9
FAN26G0599 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.2e-51 208.0 370 40.8
FAN26G1852 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.1e-51 207.2 390 39.7
FAN19G0608 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.8e-51 206.8 329 43.5
FAN23G0913 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.4e-50 204.5 378 38.6
FAN26G1044 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.9e-50 201.8 332 41.3
FAN26G0144 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.2e-49 201.4 388 39.2
FAN03G1911 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.0e-49 200.7 370 37.8
FvH4_1g04982 Fragaria vesca HOM05D006732 ORTHO05D005682 7.6e-49 198.7 389 38.6
FAN19G1839 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.6e-49 198.7 368 38.6
FAN23G0775 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.4e-48 195.7 347 38.6
FvH4_1g04980 Fragaria vesca HOM05D006732 ORTHO05D005682 4.2e-47 193.0 325 43.1
FAN19G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.2e-47 193.0 325 43.1
FAN23G1448 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.2e-46 191.4 370 37.8
FAN23G0359 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.1e-45 186.0 325 42.2
FAN19G2470 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.6e-43 179.9 350 36.6
FvH4_1g05020 Fragaria vesca HOM05D006732 ORTHO05D005682 8.1e-43 178.7 327 40.1
FAN19G1442 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.3e-42 176.0 371 34.8
FAN19G1133 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.2e-41 174.9 385 34.3
FAN05G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.4e-41 173.3 361 38.2
FAN14G2290 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.4e-40 169.1 327 40.4
FAN26G1230 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.7e-37 161.0 325 35.7
FAN19G1213 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.9e-37 159.8 363 34.7
FvH4_5g09163 Fragaria vesca HOM05D006732 ORTHO05D005682 2.5e-36 157.1 214 43.9
FvH4_1g03730 Fragaria vesca HOM05D006732 ORTHO05D005682 1.8e-34 151.0 255 38.8
FAN28G0011 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.0e-33 147.5 367 31.3
FvH4_1g03870 Fragaria vesca HOM05D006732 ORTHO05D005682 2.6e-33 147.1 242 40.5
FAN19G1560 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.9e-32 142.9 200 46.5
FAN26G2548 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.9e-32 142.9 313 34.8
FvH4_1g03530 Fragaria vesca HOM05D006732 ORTHO05D005682 6.7e-29 132.5 200 44.0
FvH4_6g38540 Fragaria vesca HOM05D006732 ORTHO05D005682 4.3e-28 129.8 274 39.1
FAN26G2691 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.4e-28 129.0 167 43.7
FAN26G0550 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.6e-27 127.9 157 45.2
FvH4_1g04850 Fragaria vesca HOM05D006732 ORTHO05D005682 9.3e-23 112.1 189 38.6
RcHm_v2.0_Chr1g0376501 Rosa chinensis HOM05D008398 ORTHO05D005682 8.7e-21 105.5 253 33.6
Prupe.7G110000 Prunus persica HOM05D006732 ORTHO05D005682 1.5e-20 104.8 308 31.8
MD02G1004600 Malus domestica HOM05D006732 ORTHO05D005682 9.6e-20 102.1 281 31.3
FAN19G1354 Fragaria x ananassa HOM05D006732 ORTHO05D035266 1.3e-19 101.7 205 38.5
FAN26G3406 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.3e-19 101.7 197 33.5
FvH4_1g04991 Fragaria vesca HOM05D006732 ORTHO05D005682 2.1e-19 100.9 141 46.1
RcHm_v2.0_Chr1g0380941 Rosa chinensis HOM05D006732 ORTHO05D005682 4.8e-19 99.8 337 28.8
FAN26G3385 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.9e-18 95.9 138 41.3
RcHm_v2.0_Chr5g0043731 Rosa chinensis HOM05D018501 ORTHO05D020617 9.0e-18 95.5 377 25.5
FAN23G1684 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.2e-17 95.1 178 37.1
RcHm_v2.0_Chr2g0090141 Rosa chinensis HOM05D006732 ORTHO05D005682 1.2e-17 95.1 160 38.1
FAN23G0993 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.0e-17 94.4 168 39.3
FvH4_7g31670 Fragaria vesca HOM05D010677 ORTHO05D012678 3.4e-17 93.6 326 28.5
FAN23G1741 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.8e-17 92.8 339 28.6
FAN28G1694 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.6e-17 92.4 168 38.7
FvH4_3g44180 Fragaria vesca HOM05D031336 ORTHO05D029596 6.5e-16 89.4 409 26.7
FAN11G3653 Fragaria x ananassa HOM05D031336 ORTHO05D029596 6.5e-16 89.4 409 26.7
FAN19G1906 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.1e-15 88.6 144 40.3
FAN06G1115 Fragaria x ananassa HOM05D010677 ORTHO05D012678 1.4e-15 88.2 236 29.2
FAN06G1601 Fragaria x ananassa HOM05D010677 ORTHO05D012678 1.4e-15 88.2 236 29.2
FvH4_7g31260 Fragaria vesca HOM05D010677 ORTHO05D012678 1.9e-15 87.8 236 29.7
FvH4_7g31682 Fragaria vesca HOM05D010677 ORTHO05D012678 3.2e-15 87.0 259 29.7
Prupe.2G176100 Prunus persica HOM05D006732 ORTHO05D005682 4.2e-15 86.7 229 32.8
FAN03G3389 Fragaria x ananassa HOM05D010677 ORTHO05D012678 9.3e-15 85.5 199 32.7
FAN28G2932 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.6e-14 84.7 204 35.3
FAN10G1111 Fragaria x ananassa HOM05D000122 ORTHO05D000139 2.7e-14 84.0 314 27.7
FvH4_4g06201 Fragaria vesca HOM05D006732 ORTHO05D005682 1.0e-13 82.0 96 51.0
FAN23G1145 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.0e-13 82.0 64 62.5
FvH4_7g27001 Fragaria vesca HOM05D010677 ORTHO05D012678 1.8e-13 81.3 320 25.6
FvH4_7g31320 Fragaria vesca HOM05D010677 ORTHO05D012678 1.8e-13 81.3 224 29.0
FAN06G0815 Fragaria x ananassa HOM05D005379 ORTHO05D006661 1.8e-13 81.3 320 25.6
FvH4_1g07301 Fragaria vesca HOM05D006732 ORTHO05D005682 3.9e-13 80.1 101 43.6
FAN04G2845 Fragaria x ananassa HOM05D010677 ORTHO05D012678 3.9e-13 80.1 318 25.5
FAN10G3231 Fragaria x ananassa HOM05D000122 ORTHO05D000139 6.7e-13 79.3 290 28.6
RcHm_v2.0_Chr2g0089871 Rosa chinensis HOM05D006732 ORTHO05D005682 1.1e-12 78.6 137 36.5
FAN09G2688 Fragaria x ananassa HOM05D008398 ORTHO05D005682 4.3e-12 76.6 204 31.9
FAN15G3012 Fragaria x ananassa HOM05D010677 ORTHO05D012678 2.8e-11 73.9 208 27.9
Prupe.6G029800 Prunus persica HOM05D006732 ORTHO05D005682 6.3e-11 72.8 195 29.2
FAN03G0822 Fragaria x ananassa HOM05D010677 ORTHO05D012678 1.4e-10 71.6 141 35.5
FAN06G3455 Fragaria x ananassa HOM05D010677 ORTHO05D012678 9.0e-10 68.9 289 24.9
FAN08G2174 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.2e-09 68.6 101 38.6
Dinv24221 Davidia involucrata HOM05D015193 ORTHO05D005682 2.0e-09 67.8 218 31.2
FvH4_1g03720 Fragaria vesca HOM05D006732 ORTHO05D035266 7.7e-09 65.9 100 45.0
FAN14G5053 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.7e-09 65.9 250 27.6
FvH4_6g28610 Fragaria vesca HOM05D008398 ORTHO05D005682 1.7e-08 64.7 250 27.6
FAN23G2570 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.8e-08 63.5 77 45.5
FAN19G3146 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.0e-08 63.2 186 30.1
QL02p078454 Quercus lobata HOM05D006732 ORTHO05D005682 1.4e-07 61.6 134 32.8
FAN01G1167 Fragaria x ananassa HOM05D000122 ORTHO05D000139 3.2e-07 60.5 131 31.3
Dinv24224 Davidia involucrata HOM05D015193 ORTHO05D005682 4.2e-07 60.1 179 32.4
FvH4_7g31310 Fragaria vesca HOM05D000122 ORTHO05D012678 7.2e-07 59.3 129 27.9
FAN23G1506 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.4e-07 58.9 69 46.4
FAN06G1013 Fragaria x ananassa HOM05D005379 ORTHO05D006661 1.6e-06 58.2 181 29.8
CSS0005823 Camellia sinensis var. sinensis HOM05D015193 ORTHO05D005682 2.1e-06 57.8 221 26.7
Prupe.6G083000 Prunus persica HOM05D006765 ORTHO05D005682 3.6e-06 57.0 237 25.3


User provided reference genes

Program Settings