Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN01G2034 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.3e-78 296.2 143 100.0
RcHm_v2.0_Chr1g0377021 Rosa chinensis HOM05D006981 ORTHO05D008719 5.1e-70 267.7 142 88.0
FAN03G1713 Fragaria x ananassa HOM05D006981 ORTHO05D008719 6.3e-60 234.2 113 98.2
FAN03G1998 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.1e-59 233.4 113 98.2
FAN10G3446 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.4e-59 233.0 113 97.3
FvH4_7g29270 Fragaria vesca HOM05D006981 ORTHO05D008719 5.3e-59 231.1 113 97.3
FAN06G1994 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.0e-54 216.9 113 93.8
FAN06G2660 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.8e-51 206.1 113 91.2
MD07G1267100 Malus domestica HOM05D006981 ORTHO05D008719 1.7e-44 183.0 117 74.4
SGA_v2.0_scaffold2G01066 Striga asiatica HOM05D006981 ORTHO05D008719 3.7e-44 181.8 127 69.3
CiPaw.03G105000 Carya illinoinensis HOM05D006981 ORTHO05D008719 3.1e-43 178.7 120 73.3
Solyc06g051300.3 Solanum lycopersicum HOM05D006981 ORTHO05D008719 3.1e-43 178.7 120 72.5
Hma1.2p1_0270F.1_g108180 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 4.1e-43 178.3 118 74.6
Haze_13729 Corylus avellana HOM05D006981 ORTHO05D008719 5.4e-43 177.9 121 71.9
Manes.06G146000 Manihot esculenta HOM05D006981 ORTHO05D008719 7.0e-43 177.6 118 73.7
Cfa008306 Carpinus fangiana HOM05D006981 ORTHO05D008719 1.2e-42 176.8 121 71.9
Nitab4.5_0019580g0020 Nicotiana tabacum HOM05D006981 ORTHO05D008719 1.2e-42 176.8 119 71.4
Nitab4.5_0000080g0060 Nicotiana tabacum HOM05D006981 ORTHO05D008719 1.6e-42 176.4 118 72.0
Duzib084G0697 Durio zibethinus HOM05D006981 ORTHO05D008719 2.7e-42 175.6 119 71.4
Thecc.03G174800 Theobroma cacao HOM05D006981 ORTHO05D008719 2.7e-42 175.6 118 71.2
COL.COLO4_14290 Corchorus olitorius HOM05D006981 ORTHO05D008719 4.5e-42 174.9 119 72.3
Prupe.2G292700 Prunus persica HOM05D006981 ORTHO05D008719 5.9e-42 174.5 117 76.1
PGSC0003DMG400015647 Solanum tuberosum HOM05D006981 ORTHO05D008719 5.9e-42 174.5 118 71.2
AUR62016001 Chenopodium quinoa HOM05D006981 ORTHO05D008719 7.7e-42 174.1 121 70.2
vmacro06697 Vaccinium macrocarpon HOM05D006981 ORTHO05D008719 1.0e-41 173.7 119 70.6
Sopen06g017220 Solanum pennellii HOM05D006981 ORTHO05D008719 1.3e-41 173.3 116 72.4
CAN.G28.6 Capsicum annuum HOM05D006981 ORTHO05D008719 2.3e-41 172.6 118 71.2
Ciclev10006231m.g Citrus clementina HOM05D006981 ORTHO05D008719 2.9e-41 172.2 118 72.0
TWI14G0356 Tripterygium wilfordii HOM05D006981 ORTHO05D008719 2.9e-41 172.2 117 71.8
Cpa.g.sc107.36 Carica papaya HOM05D006981 ORTHO05D008719 3.8e-41 171.8 135 63.0
Cc02_g03150 Coffea canephora HOM05D006981 ORTHO05D008719 5.0e-41 171.4 132 66.7
Lalb_Chr19g0130931 Lupinus albus HOM05D006981 ORTHO05D008719 6.5e-41 171.0 120 66.7
Sc19g0001580 Simmondsia chinensis HOM05D006981 ORTHO05D008719 6.5e-41 171.0 116 73.3
Eucgr.K00242 Eucalyptus grandis HOM05D006981 ORTHO05D008719 8.6e-41 170.6 121 69.4
MSTRG.27124 Avicennia marina HOM05D006981 ORTHO05D008719 1.1e-40 170.2 120 68.3
Manes.09G002400 Manihot esculenta HOM05D006981 ORTHO05D008719 1.5e-40 169.9 127 66.9
Atru.chr1.479 Acer truncatum HOM05D006981 ORTHO05D008719 2.5e-40 169.1 121 68.6
HanXRQChr08g0209251 Helianthus annuus HOM05D006981 ORTHO05D008719 3.3e-40 168.7 122 67.2
ECA233G5478 Erigeron canadensis HOM05D006981 ORTHO05D008719 5.5e-40 167.9 132 66.7
QL09p014567 Quercus lobata HOM05D006981 ORTHO05D008719 5.5e-40 167.9 118 70.3
AUR62021209 Chenopodium quinoa HOM05D006981 ORTHO05D008719 7.2e-40 167.5 121 68.6
Duzib205G0859 Durio zibethinus HOM05D006981 ORTHO05D008719 7.2e-40 167.5 119 67.2
Migut.F00354 Erythranthe guttata HOM05D006981 ORTHO05D008719 7.2e-40 167.5 127 65.4
arahy.Tifrunner.gnm1.ann1.8WRD93 Arachis hypogaea HOM05D006981 ORTHO05D008719 9.5e-40 167.2 146 57.5
arahy.Tifrunner.gnm1.ann1.T9EWQW Arachis hypogaea HOM05D006981 ORTHO05D008719 9.5e-40 167.2 145 57.2
Lsat_1_v5_gn_8_8340 Lactuca sativa HOM05D006981 ORTHO05D008719 1.6e-39 166.4 125 64.8
Glyma.16G194500 Glycine max HOM05D006981 ORTHO05D008719 2.8e-39 165.6 114 69.3
Glyma.09G140600 Glycine max HOM05D006981 ORTHO05D008719 3.6e-39 165.2 114 69.3
Lj2g0020265 Lotus japonicus HOM05D006981 ORTHO05D008719 3.6e-39 165.2 114 67.5
Nn4g26525 Nelumbo nucifera HOM05D006981 ORTHO05D008719 3.6e-39 165.2 120 69.2
PGR142G3060 Punica granatum HOM05D006981 ORTHO05D008719 3.6e-39 165.2 121 70.2
ClCG01G005500 Citrullus lanatus HOM05D003170 ORTHO05D008719 4.7e-39 164.9 118 68.6
Lj1C995G12 Lonicera japonica HOM05D006981 ORTHO05D008719 4.7e-39 164.9 122 66.4
SalBow4G2131 Salvia bowleyana HOM05D006981 ORTHO05D008719 6.1e-39 164.5 118 66.1
Aqoxy7G00390 Aquilegia oxysepala HOM05D006981 ORTHO05D008719 8.0e-39 164.1 119 68.9
Gohir.D08G111300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 1.0e-38 163.7 115 68.7
Gorai.004G119200 Gossypium raimondii HOM05D006981 ORTHO05D008719 1.0e-38 163.7 115 68.7
unitig_747.g21767 Utricularia gibba HOM05D006981 ORTHO05D008719 1.0e-38 163.7 120 64.2
GSVIVG01010548001 Vitis vinifera HOM05D006981 ORTHO05D008719 1.0e-38 163.7 118 66.9
PSO782G4575 Papaver somniferum HOM05D006981 ORTHO05D008719 1.4e-38 163.3 128 64.1
Sed0011448 Sechium edule HOM05D006981 ORTHO05D008719 2.3e-38 162.5 119 69.7
Oeu056238.2 Olea europaea HOM05D006981 ORTHO05D008719 3.0e-38 162.2 121 68.6
SalBow4G1422 Salvia bowleyana HOM05D006981 ORTHO05D008719 3.0e-38 162.2 118 65.3
Hund11756 Selenicereus undatus HOM05D006981 ORTHO05D008719 3.0e-38 162.2 120 63.3
TAR375G0811 Trochodendron aralioides HOM05D006981 ORTHO05D008719 3.0e-38 162.2 128 65.6
VMungo0464G1391 Vigna mungo HOM05D006981 ORTHO05D008719 3.0e-38 162.2 115 66.1
CsaV3_5G005720 Cucumis sativus L. HOM05D006981 ORTHO05D008719 5.2e-38 161.4 118 66.9
MELO3C005381.2 Cucumis melo HOM05D006981 ORTHO05D008719 6.8e-38 161.0 118 66.9
DCAR_009354 Daucus carota HOM05D006981 ORTHO05D008719 6.8e-38 161.0 121 63.6
CANSAT21G0349 Cannabis sativa HOM05D006981 ORTHO05D008719 8.9e-38 160.6 114 69.3
Actinidia32871 Actinidia chinensis HOM05D006981 ORTHO05D008719 1.2e-37 160.2 142 59.2
Gohir.A08G100300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 2.0e-37 159.5 121 65.3
Ah.13g068510 Amaranthus hybridus HOM05D006981 ORTHO05D008719 5.7e-37 157.9 124 62.1
PSO478G2189 Papaver somniferum HOM05D006981 ORTHO05D008719 7.5e-37 157.5 129 61.2
Phvul.004G118000 Phaseolus vulgaris HOM05D006981 ORTHO05D008719 9.8e-37 157.1 119 63.0
MBI17_g21049_MAGBIO Magnolia biondii HOM05D006981 ORTHO05D008719 1.7e-36 156.4 118 66.9
Ca_25351_v3 Cicer arietinum L. HOM05D000367 ORTHO05D001438 4.9e-36 154.8 114 65.8
Medtr6g471020 Medicago truncatula HOM05D006981 ORTHO05D008719 4.9e-36 154.8 114 65.8
CSS0044451 Camellia sinensis var. sinensis HOM05D006981 ORTHO05D008719 6.3e-36 154.5 113 64.6
CDE08G1025 Ceratophyllum demersum HOM05D006981 ORTHO05D008719 1.2e-34 150.2 117 64.1
Sabra15G0150900 Salix brachista HOM05D006981 ORTHO05D008719 1.6e-34 149.8 127 63.8
Sp6g14470 Schrenkiella parvula HOM05D006981 ORTHO05D008719 2.0e-34 149.4 120 61.7
Carub.0008s1231 Capsella rubella HOM05D006981 ORTHO05D008719 2.7e-34 149.1 125 63.2
Potri.015G140200 Populus trichocarpa HOM05D006981 ORTHO05D008719 5.9e-34 147.9 127 63.0
Thhalv10015042m.g Eutrema salsugineum HOM05D006981 ORTHO05D008719 1.3e-33 146.7 118 61.0
EL10Ac3g05672 Beta vulgaris HOM05D006981 ORTHO05D008719 1.7e-33 146.4 122 59.8
BcaC04g20601 Brassica carinata HOM05D006981 ORTHO05D008719 1.7e-33 146.4 115 62.6
C09p41630 Brassica napus HOM05D006981 ORTHO05D008719 1.7e-33 146.4 115 62.6
BolC9t57050H Brassica oleracea HOM05D006981 ORTHO05D008719 1.7e-33 146.4 115 62.6
HPP92_028124 Vanilla planifolia HOM05D006981 ORTHO05D008719 2.3e-33 146.0 120 65.8
THA.LOC104825097 Tarenaya hassleriana HOM05D006981 ORTHO05D008719 3.8e-33 145.2 117 64.1
Aa31LG3G8600 Aethionema arabicum HOM05D006981 ORTHO05D008719 8.6e-33 144.1 115 62.6
HPP92_020865 Vanilla planifolia HOM05D006981 ORTHO05D008719 1.1e-32 143.7 120 65.0
BcaB08g35575 Brassica carinata HOM05D006981 ORTHO05D008719 7.3e-32 141.0 115 60.9
A10p09920 Brassica napus HOM05D006981 ORTHO05D008719 9.5e-32 140.6 115 60.0
AL8G26600 Arabidopsis lyrata HOM05D006981 ORTHO05D008719 2.8e-31 139.0 118 61.9
AT5G52220 Arabidopsis thaliana HOM05D006981 ORTHO05D008719 2.8e-31 139.0 118 61.9
BraA10t43072Z Brassica rapa HOM05D006981 ORTHO05D008719 3.6e-31 138.7 115 59.1
Zm00001eb309380 Zea mays HOM05D006981 ORTHO05D008719 6.1e-31 137.9 127 57.5
SHI13798 Sapria himalayana HOM05D006981 ORTHO05D008719 1.4e-30 136.7 149 50.3
CARHR265140 Cardamine hirsuta HOM05D006981 ORTHO05D008719 4.0e-30 135.2 118 60.2
Peaxi162Scf00040g00323 Petunia axillaris HOM05D006981 ORTHO05D008719 5.4e-27 124.8 118 59.3
SMO141G0174 Selaginella moellendorffii HOM05D006981 ORTHO05D008719 7.0e-27 124.4 119 52.9
Pp3c14_5260 Physcomitrium patens HOM05D006981 ORTHO05D008719 3.0e-25 119.0 125 52.0
Mapoly0027s0013 Marchantia polymorpha HOM05D006981 ORTHO05D008719 6.6e-25 117.9 127 52.8
Manes.14G129556 Manihot esculenta HOM05D006981 ORTHO05D008719 1.5e-24 116.7 73 74.0
AagrBONN_evm.TU.Sc2ySwM_369.83 Anthoceros agrestis HOM05D006981 ORTHO05D008719 2.5e-24 115.9 120 49.2
Actinidia34099 Actinidia chinensis HOM05D006981 ORTHO05D008719 5.2e-22 108.2 71 69.0
PRCOL_00004746 Prasinoderma coloniale HOM05D006981 ORTHO05D008719 2.1e-18 96.3 125 39.2
Hma1.2p1_0270F.1_g108170 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 2.3e-17 92.8 57 70.2
Psat1g030600 Pisum sativum HOM05D006981 ORTHO05D008719 1.5e-16 90.1 87 58.6
Cre06.g281750 Chlamydomonas reinhardtii HOM05D006981 ORTHO05D008719 2.0e-13 79.7 111 41.4
Psat1g030360 Pisum sativum HOM05D006981 ORTHO05D008719 9.9e-13 77.4 52 67.3
SEGI_30853 Sequoiadendron giganteum HOM05D006981 ORTHO05D008719 2.2e-12 76.3 74 58.1
CBR_g4805 Chara braunii HOM05D006981 ORTHO05D008719 1.6e-10 70.1 107 37.4


User provided reference genes

Program Settings