Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN01G1692 Fragaria x ananassa HOM05D008287 ORTHO05D010110 3.8e-44 181.0 86 100.0
FAN10G2561 Fragaria x ananassa HOM05D008287 ORTHO05D010110 2.5e-43 178.3 86 98.8
FvH4_7g19600 Fragaria vesca HOM05D008287 ORTHO05D010110 1.4e-41 172.6 86 95.3
FAN03G0373 Fragaria x ananassa HOM05D008287 ORTHO05D010110 2.2e-36 155.2 78 97.4
FAN06G2349 Fragaria x ananassa HOM05D000286 ORTHO05D009721 8.5e-36 153.3 77 94.8
RcHm_v2.0_Chr1g0363411 Rosa chinensis HOM05D008287 ORTHO05D010110 3.3e-32 141.4 86 79.1
Prupe.2G213800 Prunus persica HOM05D008287 ORTHO05D010110 3.1e-14 81.6 90 50.0
MD01G1108600 Malus domestica HOM05D008287 ORTHO05D010110 9.1e-14 80.1 98 45.9
Duzib114G0252 Durio zibethinus HOM05D008287 ORTHO05D010110 1.3e-12 76.3 73 46.6
Gorai.013G025800 Gossypium raimondii HOM05D008287 ORTHO05D010110 2.9e-12 75.1 76 47.4
Nn2g10792 Nelumbo nucifera HOM05D008287 ORTHO05D010110 3.8e-12 74.7 92 50.0
TAR629G1172 Trochodendron aralioides HOM05D008287 ORTHO05D010110 1.1e-11 73.2 87 47.1
Gohir.A13G024200 Gossypium hirsutum HOM05D008287 ORTHO05D010110 2.5e-11 72.0 76 48.7
Gohir.D13G023100 Gossypium hirsutum HOM05D008287 ORTHO05D010110 3.3e-11 71.6 76 47.4
Thecc.10G073600 Theobroma cacao HOM05D008287 ORTHO05D010110 5.5e-11 70.9 97 47.4
CiPaw.01G272900 Carya illinoinensis HOM05D008287 ORTHO05D010110 3.0e-09 65.1 56 55.4
MBI10_g13401_MAGBIO Magnolia biondii HOM05D008287 ORTHO05D010110 3.0e-09 65.1 73 53.4
HanXRQChr01g0011461 Helianthus annuus HOM05D008287 ORTHO05D010110 5.2e-09 64.3 90 42.2
ClCG05G021010 Citrullus lanatus HOM05D008287 ORTHO05D010110 1.5e-08 62.8 74 44.6
MSTRG.9186 Avicennia marina HOM05D008287 ORTHO05D010110 2.0e-08 62.4 76 48.7
CsaV3_5G036300 Cucumis sativus L. HOM05D008287 ORTHO05D010110 2.6e-08 62.0 73 45.2
Sed0007335 Sechium edule HOM05D008287 ORTHO05D010110 2.6e-08 62.0 69 44.9
PGSC0003DMG400012876 Solanum tuberosum HOM05D008287 ORTHO05D010110 2.6e-08 62.0 52 59.6
Sabra10G0172000 Salix brachista HOM05D008287 ORTHO05D010110 3.4e-08 61.6 94 38.3
Aa31sc101G40 Aethionema arabicum HOM05D013386 ORTHO05D010110 4.4e-08 61.2 86 43.0
Aqoxy1G01238 Aquilegia oxysepala HOM05D008287 ORTHO05D010110 4.4e-08 61.2 49 61.2
Solyc04g049407.1 Solanum lycopersicum HOM05D008287 ORTHO05D010110 4.4e-08 61.2 52 59.6
Atru.chr12.751 Acer truncatum HOM05D008287 ORTHO05D010110 9.8e-08 60.1 86 40.7
Sopen04g019400 Solanum pennellii HOM05D008287 ORTHO05D010110 9.8e-08 60.1 52 57.7
Hma1.2p1_0063F.1_g034480 Hydrangea macrophylla HOM05D008287 ORTHO05D010110 1.3e-07 59.7 44 65.9
Nitab4.5_0000575g0160 Nicotiana tabacum HOM05D008287 ORTHO05D010110 1.3e-07 59.7 39 66.7
Nitab4.5_0010206g0030 Nicotiana tabacum HOM05D008287 ORTHO05D010110 1.3e-07 59.7 39 66.7
Atru.chr12.776 Acer truncatum HOM05D008287 ORTHO05D010110 1.7e-07 59.3 86 41.9
Manes.10G045900 Manihot esculenta HOM05D008287 ORTHO05D010110 1.7e-07 59.3 52 59.6
Sc09g0006380 Simmondsia chinensis HOM05D008287 ORTHO05D010110 1.7e-07 59.3 54 55.6
ECA238G2524 Erigeron canadensis HOM05D008287 ORTHO05D010110 2.2e-07 58.9 81 40.7
Migut.F02005 Erythranthe guttata HOM05D008287 ORTHO05D010110 2.2e-07 58.9 59 54.2
Phvul.004G082500 Phaseolus vulgaris HOM05D008287 ORTHO05D010110 2.8e-07 58.5 80 38.8
VMungo0464G1886 Vigna mungo HOM05D008287 ORTHO05D010110 2.8e-07 58.5 80 38.8
Actinidia38852 Actinidia chinensis HOM05D008287 ORTHO05D010110 3.7e-07 58.2 95 42.1
PGR142G4013 Punica granatum HOM05D008287 ORTHO05D010110 3.7e-07 58.2 32 78.1
Ciclev10033160m.g Citrus clementina HOM05D008287 ORTHO05D010110 6.3e-07 57.4 32 75.0
Sabra08G0027300 Salix brachista HOM05D008287 ORTHO05D010110 6.3e-07 57.4 36 66.7
SGA_v2.0_scaffold62G21430 Striga asiatica HOM05D008287 ORTHO05D010110 6.3e-07 57.4 32 68.8
Glyma.02G073500 Glycine max HOM05D008287 ORTHO05D010110 1.1e-06 56.6 60 46.7
Potri.010G222400 Populus trichocarpa HOM05D008287 ORTHO05D010110 1.4e-06 56.2 36 63.9
CANSAT56G0495 Cannabis sativa HOM05D008287 ORTHO05D010110 2.4e-06 55.5 90 36.7
Glyma.16G154900 Glycine max HOM05D008287 ORTHO05D010110 3.1e-06 55.1 56 46.4
Rhsim09G0151900 Rhododendron simsii HOM05D008287 ORTHO05D010110 3.1e-06 55.1 40 60.0
Potri.008G039901 Populus trichocarpa HOM05D008287 ORTHO05D010110 4.1e-06 54.7 94 36.2
CSS0035042 Camellia sinensis var. sinensis HOM05D008287 ORTHO05D010110 5.4e-06 54.3 32 71.9
TPR.G822 Trifolium pratense HOM05D008287 ORTHO05D010110 7.0e-06 53.9 82 39.0


User provided reference genes

Program Settings