Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN01G1688 Fragaria x ananassa HOM05D006848 ORTHO05D008445 1.2e-121 439.9 233 100.0
FvH4_7g00900 Fragaria vesca HOM05D006848 ORTHO05D008445 1.1e-117 426.8 245 93.9
FAN06G1876 Fragaria x ananassa HOM05D006848 ORTHO05D008445 7.2e-114 414.1 224 97.8
FAN10G1997 Fragaria x ananassa HOM05D006848 ORTHO05D008445 7.2e-114 414.1 251 88.8
RcHm_v2.0_Chr3g0473601 Rosa chinensis HOM05D006848 ORTHO05D008445 1.1e-93 347.1 223 84.3
MD02G1313800 Malus domestica HOM05D006848 ORTHO05D008445 2.3e-88 329.3 248 73.4
MD07G1008600 Malus domestica HOM05D006848 ORTHO05D008445 3.4e-87 325.5 217 80.6
Sabra09G0046200 Salix brachista HOM05D006848 ORTHO05D008445 2.1e-84 316.2 229 73.8
CANSAT80G2127 Cannabis sativa HOM05D006848 ORTHO05D008445 4.3e-82 308.5 244 66.8
Haze_03213 Corylus avellana HOM05D006848 ORTHO05D008445 9.5e-82 307.4 248 69.4
Migut.B01319 Erythranthe guttata HOM05D006848 ORTHO05D008445 6.2e-81 304.7 245 70.6
PGSC0003DMG400006872 Solanum tuberosum HOM05D006848 ORTHO05D008445 6.2e-81 304.7 221 73.3
Potri.009G062500 Populus trichocarpa HOM05D006848 ORTHO05D008445 8.1e-81 304.3 229 70.7
Glyma.15G273300 Glycine max HOM05D006848 ORTHO05D008445 1.8e-80 303.1 244 69.3
Nitab4.5_0002477g0050 Nicotiana tabacum HOM05D006848 ORTHO05D008445 4.0e-80 302.0 215 73.5
CAN.G170.111 Capsicum annuum HOM05D006848 ORTHO05D008445 1.2e-79 300.4 207 73.4
Lalb_Chr01g0015361 Lupinus albus HOM05D006848 ORTHO05D008445 1.5e-79 300.1 247 66.8
Oeu036185.1 Olea europaea HOM05D006848 ORTHO05D008445 2.0e-79 299.7 216 75.5
QL04p007215 Quercus lobata HOM05D006848 ORTHO05D008445 2.0e-79 299.7 247 68.8
Hma1.2p1_0312F.1_g121500 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 2.6e-79 299.3 224 73.2
VMungo1080G1360 Vigna mungo HOM05D006848 ORTHO05D008445 4.4e-79 298.5 221 73.3
PGR031G3843 Punica granatum HOM05D006848 ORTHO05D008445 5.8e-79 298.1 226 71.7
Nitab4.5_0000634g0080 Nicotiana tabacum HOM05D006848 ORTHO05D008445 1.3e-78 297.0 216 73.1
Atru.chr11.2648 Acer truncatum HOM05D006848 ORTHO05D008445 6.4e-78 294.7 174 83.3
Peaxi162Scf00347g00071 Petunia axillaris HOM05D006848 ORTHO05D008445 7.1e-77 291.2 208 72.6
Sed0006624 Sechium edule HOM05D006848 ORTHO05D008445 7.1e-77 291.2 226 67.3
CiPaw.13G004400 Carya illinoinensis HOM05D006848 ORTHO05D008445 9.2e-77 290.8 184 78.8
Sopen01g034120 Solanum pennellii HOM05D006848 ORTHO05D008445 1.2e-76 290.4 223 74.0
Peaxi162Scf00428g00063 Petunia axillaris HOM05D006848 ORTHO05D008445 1.6e-76 290.0 184 78.8
Solyc01g087040.2 Solanum lycopersicum HOM05D006848 ORTHO05D008445 2.7e-76 289.3 223 73.5
ClCG09G004240 Citrullus lanatus HOM05D006848 ORTHO05D008445 3.5e-76 288.9 245 65.3
Eucgr.G03390 Eucalyptus grandis HOM05D006848 ORTHO05D008445 3.5e-76 288.9 242 64.0
TPR.G12217 Trifolium pratense HOM05D006848 ORTHO05D008445 3.5e-76 288.9 203 74.9
Ciclev10032624m.g Citrus clementina HOM05D006848 ORTHO05D008445 6.0e-76 288.1 241 64.3
Rhsim07G0054800 Rhododendron simsii HOM05D006848 ORTHO05D008445 1.3e-75 287.0 250 67.6
Glyma.08G154300 Glycine max HOM05D006848 ORTHO05D008445 1.7e-75 286.6 247 66.8
Eucgr.H02489 Eucalyptus grandis HOM05D006848 ORTHO05D008445 3.9e-75 285.4 187 74.3
Aqoxy3G03705 Aquilegia oxysepala HOM05D006848 ORTHO05D008445 5.1e-75 285.0 188 74.5
Thecc.01G412000 Theobroma cacao HOM05D006848 ORTHO05D008445 6.6e-75 284.6 246 62.6
Ca_14368_v3 Cicer arietinum L. HOM05D006848 ORTHO05D008445 8.6e-75 284.3 213 72.3
DCAR_029663 Daucus carota HOM05D006848 ORTHO05D008445 8.6e-75 284.3 209 75.1
Duzib138G1675 Durio zibethinus HOM05D006848 ORTHO05D008445 1.1e-74 283.9 247 64.0
Prupe.2G012000 Prunus persica HOM05D006848 ORTHO05D008445 1.9e-74 283.1 219 71.7
vmacro13656 Vaccinium macrocarpon HOM05D006848 ORTHO05D008445 4.3e-74 282.0 239 67.4
Gohir.D08G063100 Gossypium hirsutum HOM05D006848 ORTHO05D008445 7.3e-74 281.2 233 66.5
Gorai.004G065300 Gossypium raimondii HOM05D006848 ORTHO05D008445 7.3e-74 281.2 233 66.5
EL10Ac2g03652 Beta vulgaris HOM05D006848 ORTHO05D008445 1.2e-73 280.4 244 62.7
MELO3C023542.2 Cucumis melo HOM05D006848 ORTHO05D008445 1.6e-73 280.0 189 74.1
TAR623G0094 Trochodendron aralioides HOM05D006848 ORTHO05D008445 1.6e-73 280.0 180 77.2
HanXRQChr01g0016151 Helianthus annuus HOM05D006848 ORTHO05D008445 4.7e-73 278.5 219 68.0
PSO135G0340 Papaver somniferum HOM05D006848 ORTHO05D008445 4.7e-73 278.5 183 76.5
PSO384G0049 Papaver somniferum HOM05D006848 ORTHO05D008445 4.7e-73 278.5 183 76.5
CsaV3_7G031150 Cucumis sativus L. HOM05D006848 ORTHO05D008445 1.1e-72 277.3 248 62.1
COL.COLO4_23924 Corchorus olitorius HOM05D006848 ORTHO05D008445 1.4e-72 276.9 244 62.7
SalBow5G3403 Salvia bowleyana HOM05D006848 ORTHO05D008445 1.8e-72 276.6 241 62.2
MBI01_g27616_MAGBIO Magnolia biondii HOM05D006848 ORTHO05D008445 2.4e-72 276.2 246 65.9
Medtr3g028150 Medicago truncatula HOM05D006848 ORTHO05D008445 2.4e-72 276.2 174 76.4
TAR623G0130 Trochodendron aralioides HOM05D006848 ORTHO05D008445 2.4e-72 276.2 177 77.4
Gohir.A08G053600 Gossypium hirsutum HOM05D006848 ORTHO05D008445 5.2e-72 275.0 233 67.0
Lj7A569T67 Lonicera japonica HOM05D006848 ORTHO05D008445 6.9e-72 274.6 170 78.8
Phvul.005G020200 Phaseolus vulgaris HOM05D006848 ORTHO05D008445 8.9e-72 274.2 248 64.5
Psat5g204320 Pisum sativum HOM05D006848 ORTHO05D008445 8.9e-72 274.2 170 77.1
Cc02_g27800 Coffea canephora HOM05D006848 ORTHO05D008445 1.2e-71 273.9 176 77.3
TWI09G1547 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 2.0e-71 273.1 212 66.5
AL5G46400 Arabidopsis lyrata HOM05D006848 ORTHO05D008445 2.6e-71 272.7 225 65.3
Sc10g0000020 Simmondsia chinensis HOM05D006848 ORTHO05D008445 2.6e-71 272.7 248 64.1
Carub.0005s3015 Capsella rubella HOM05D006848 ORTHO05D008445 5.8e-71 271.6 217 65.4
Lsat_1_v5_gn_1_107841 Lactuca sativa HOM05D006848 ORTHO05D008445 3.8e-70 268.9 217 69.6
TWI53G1868 Tripterygium wilfordii HOM05D006848 ORTHO05D008445 3.8e-70 268.9 246 61.0
THA.LOC104819691 Tarenaya hassleriana HOM05D006848 ORTHO05D008445 4.9e-70 268.5 179 73.2
Cpa.g.sc386.5 Carica papaya HOM05D006848 ORTHO05D008445 8.4e-70 267.7 242 63.6
CARHR291430 Cardamine hirsuta HOM05D006848 ORTHO05D008445 1.9e-69 266.5 215 65.6
unitig_750.g28451 Utricularia gibba HOM05D006848 ORTHO05D008445 3.2e-69 265.8 222 66.7
arahy.Tifrunner.gnm1.ann1.9ZN1DC Arachis hypogaea HOM05D006848 ORTHO05D008445 1.6e-68 263.5 211 68.7
A03p27190 Brassica napus HOM05D006848 ORTHO05D008445 1.0e-67 260.8 233 62.7
BraA03t11932Z Brassica rapa HOM05D006848 ORTHO05D008445 1.0e-67 260.8 233 62.7
BcaB01g02988 Brassica carinata HOM05D006848 ORTHO05D008445 1.3e-67 260.4 230 63.5
BcaC01g04883 Brassica carinata HOM05D006848 ORTHO05D008445 1.3e-67 260.4 233 62.7
BolC3t15604H Brassica oleracea HOM05D006848 ORTHO05D008445 1.3e-67 260.4 233 62.7
arahy.Tifrunner.gnm1.ann1.27LE56 Arachis hypogaea HOM05D006848 ORTHO05D008445 6.6e-67 258.1 246 61.0
CDE05G1882 Ceratophyllum demersum HOM05D006848 ORTHO05D008445 8.7e-67 257.7 244 59.4
Nn113s43373 Nelumbo nucifera HOM05D006848 ORTHO05D008445 1.5e-66 256.9 261 60.5
Nn2g15435 Nelumbo nucifera HOM05D006848 ORTHO05D008445 1.5e-66 256.9 261 60.5
ECA248G3622 Erigeron canadensis HOM05D006848 ORTHO05D008445 4.5e-63 245.4 244 57.4
SGA_v2.0_scaffold167G38443 Striga asiatica HOM05D006848 ORTHO05D008445 5.8e-63 245.0 242 60.3
AUR62009377 Chenopodium quinoa HOM05D006848 ORTHO05D008445 1.3e-62 243.8 246 59.3
Lj1g0010524 Lotus japonicus HOM05D006848 ORTHO05D008445 3.8e-62 242.3 158 75.9
ATR0605G006 Amborella trichopoda HOM05D006848 ORTHO05D008445 1.9e-61 240.0 187 64.7
Sp1g00010 Schrenkiella parvula HOM05D006848 ORTHO05D008445 1.9e-61 240.0 173 70.5
Sp5g00040 Schrenkiella parvula HOM05D006848 ORTHO05D008445 1.9e-61 240.0 173 70.5
SEGI_25651 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 1.2e-60 237.3 167 70.1
AUR62023058 Chenopodium quinoa HOM05D006848 ORTHO05D008445 1.8e-59 233.4 248 57.3
AagrBONN_evm.TU.Sc2ySwM_228.3199 Anthoceros agrestis HOM05D006848 ORTHO05D008445 6.7e-59 231.5 179 60.9
Manes.10G144600 Manihot esculenta HOM05D006848 ORTHO05D008445 8.7e-59 231.1 186 69.4
C03p32680 Brassica napus HOM05D006848 ORTHO05D008445 2.5e-58 229.6 212 62.7
Aa31LG10G17430 Aethionema arabicum HOM05D006848 ORTHO05D008445 3.3e-58 229.2 150 74.0
Zm00001eb034740 Zea mays HOM05D006848 ORTHO05D008445 3.7e-57 225.7 179 63.7
Thhalv10006361m.g Eutrema salsugineum HOM05D006848 ORTHO05D008445 2.4e-56 223.0 221 57.5
SMO217G0004 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 1.2e-55 220.7 173 61.3
SMO356G0122 Selaginella moellendorffii HOM05D006848 ORTHO05D008445 1.2e-55 220.7 173 61.3
Actinidia36713 Actinidia chinensis HOM05D006848 ORTHO05D008445 9.9e-55 217.6 137 73.7
AT3G63540 Arabidopsis thaliana HOM05D006848 ORTHO05D008445 1.1e-53 214.2 130 78.5
HPP92_007477 Vanilla planifolia HOM05D006848 ORTHO05D008445 4.2e-53 212.2 244 51.2
Pp3c4_11800 Physcomitrium patens HOM05D006848 ORTHO05D008445 7.1e-53 211.5 175 59.4
RcHm_v2.0_Chr1g0315791 Rosa chinensis HOM05D006848 ORTHO05D008445 6.0e-52 208.4 115 86.1
Dinv43453 Davidia involucrata HOM05D006848 ORTHO05D008445 3.0e-51 206.1 163 73.0
Mapoly0075s0034 Marchantia polymorpha HOM05D006848 ORTHO05D008445 5.1e-51 205.3 179 55.9
Os08g0504500 Oryza sativa ssp. japonica HOM05D006848 ORTHO05D008445 2.1e-49 199.9 169 58.6
CBR_g23941 Chara braunii HOM05D006848 ORTHO05D008445 1.7e-46 190.3 174 52.9
CDE05G3657 Ceratophyllum demersum HOM05D000031 ORTHO05D008445 4.9e-46 188.7 124 72.6
Hma1.2p1_0137F.1_g062450 Hydrangea macrophylla HOM05D006848 ORTHO05D008445 4.8e-41 172.2 122 70.5
Actinidia24670 Actinidia chinensis HOM05D006848 ORTHO05D008445 7.2e-37 158.3 110 70.0
MCO14G442 Micromonas commoda HOM05D006848 ORTHO05D008445 6.5e-22 108.6 179 39.1
SEGI_20764 Sequoiadendron giganteum HOM05D006848 ORTHO05D008445 1.5e-13 80.9 59 69.5
PRCOL_00004469 Prasinoderma coloniale HOM05D006848 ORTHO05D008445 1.0e-11 74.7 187 33.2
A04p00030 Brassica napus HOM05D006848 ORTHO05D008445 2.6e-10 70.1 55 60.0


User provided reference genes

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