Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN01G1519 Fragaria x ananassa HOM05D006696 ORTHO05D008683 0.0e+00 1283.9 622 100.0
FAN06G3694 Fragaria x ananassa HOM05D006696 ORTHO05D008683 0.0e+00 1275.4 622 99.4
FvH4_7g11430 Fragaria vesca HOM05D006696 ORTHO05D008683 0.0e+00 1267.3 622 98.4
FAN06G1977 Fragaria x ananassa HOM05D006696 ORTHO05D008683 0.0e+00 1264.6 622 98.2
FAN03G1153 Fragaria x ananassa HOM05D006696 ORTHO05D008683 0.0e+00 1223.8 622 95.2
RcHm_v2.0_Chr1g0349711 Rosa chinensis HOM05D006696 ORTHO05D008683 6.4e-311 1070.1 630 83.3
MD07G1119000 Malus domestica HOM05D006696 ORTHO05D008683 1.3e-287 992.6 625 76.8
Prupe.2G142200 Prunus persica HOM05D006696 ORTHO05D008683 3.0e-284 981.5 658 73.6
COL.COLO4_24599 Corchorus olitorius HOM05D006696 ORTHO05D008683 1.3e-266 922.9 601 72.2
Potri.002G146100 Populus trichocarpa HOM05D006696 ORTHO05D008683 9.2e-265 916.8 633 70.1
Gohir.D13G120600 Gossypium hirsutum HOM05D006696 ORTHO05D008683 4.3e-262 907.9 629 69.6
Thecc.08G173400 Theobroma cacao HOM05D006696 ORTHO05D008683 5.6e-262 907.5 620 69.8
Gorai.013G134800 Gossypium raimondii HOM05D006696 ORTHO05D008683 9.5e-262 906.7 629 69.5
Manes.01G267400 Manihot esculenta HOM05D006696 ORTHO05D008683 2.8e-261 905.2 649 68.3
CiPaw.01G264000 Carya illinoinensis HOM05D006696 ORTHO05D008683 8.0e-261 903.7 636 69.8
Lj7C531T6 Lonicera japonica HOM05D006696 ORTHO05D008683 1.0e-260 903.3 593 72.8
Ciclev10019231m.g Citrus clementina HOM05D006696 ORTHO05D008683 4.0e-260 901.4 633 69.4
Gohir.A13G117300 Gossypium hirsutum HOM05D006696 ORTHO05D008683 6.8e-260 900.6 630 68.9
Sabra02G0113800 Salix brachista HOM05D006696 ORTHO05D008683 2.0e-259 899.0 633 69.4
Hma1.2p1_0301F.1_g118560 Hydrangea macrophylla HOM05D006696 ORTHO05D008683 1.3e-258 896.3 578 72.8
Rhsim01G0149400 Rhododendron simsii HOM05D006696 ORTHO05D008683 2.4e-257 892.1 637 69.1
TWI14G1225 Tripterygium wilfordii HOM05D006696 ORTHO05D008683 4.1e-257 891.3 645 68.5
QL08p052869 Quercus lobata HOM05D006696 ORTHO05D008683 1.2e-256 889.8 661 66.9
Phvul.010G081400 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 2.0e-256 889.0 643 68.6
VMungo0331G0021 Vigna mungo HOM05D006696 ORTHO05D008683 2.7e-256 888.6 577 72.6
Glyma.03G028100 Glycine max HOM05D006696 ORTHO05D008683 4.6e-256 887.9 629 69.2
CSS0014714 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 6.0e-256 887.5 583 72.9
Lalb_Chr07g0189961 Lupinus albus HOM05D006696 ORTHO05D008683 6.0e-256 887.5 626 70.1
arahy.Tifrunner.gnm1.ann1.30BUB6 Arachis hypogaea HOM05D006696 ORTHO05D008683 1.0e-255 886.7 581 73.3
arahy.Tifrunner.gnm1.ann1.PBYD8I Arachis hypogaea HOM05D006696 ORTHO05D008683 3.9e-255 884.8 581 73.1
HanXRQChr03g0093971 Helianthus annuus HOM05D006696 ORTHO05D008683 3.9e-255 884.8 571 71.6
Atru.chr5.281 Acer truncatum HOM05D006696 ORTHO05D008683 8.6e-255 883.6 649 66.4
TAR629G0060 Trochodendron aralioides HOM05D006696 ORTHO05D008683 8.6e-255 883.6 588 72.4
CSS0026641 Camellia sinensis var. sinensis HOM05D006696 ORTHO05D008683 7.3e-254 880.6 583 72.6
Migut.B01614 Erythranthe guttata HOM05D006696 ORTHO05D008683 1.2e-253 879.8 632 67.2
Peaxi162Scf00013g03019 Petunia axillaris HOM05D006696 ORTHO05D008683 1.2e-253 879.8 620 70.3
Sopen01g036880 Solanum pennellii HOM05D006696 ORTHO05D008683 6.2e-253 877.5 569 72.2
Haze_16792 Corylus avellana HOM05D006696 ORTHO05D008683 1.4e-252 876.3 635 67.7
ClCG05G002380 Citrullus lanatus HOM05D006696 ORTHO05D008683 1.8e-252 875.9 639 68.1
Nn6g34076 Nelumbo nucifera HOM05D006696 ORTHO05D008683 2.3e-252 875.5 583 71.0
CAN.G388.34 Capsicum annuum HOM05D006696 ORTHO05D008683 3.1e-252 875.2 571 71.8
Cc02_g24120 Coffea canephora HOM05D006696 ORTHO05D008683 2.6e-251 872.1 575 71.1
Ca_19926_v3 Cicer arietinum L. HOM05D006696 ORTHO05D008683 3.4e-251 871.7 586 70.8
PGSC0003DMG400025962 Solanum tuberosum HOM05D006696 ORTHO05D008683 4.4e-251 871.3 621 68.3
THA.LOC104814083 Tarenaya hassleriana HOM05D006696 ORTHO05D008683 9.8e-251 870.2 639 67.4
Psat7g231000 Pisum sativum HOM05D006696 ORTHO05D008683 1.3e-250 869.8 569 72.9
Medtr4g025130 Medicago truncatula HOM05D006696 ORTHO05D008683 1.7e-250 869.4 586 69.8
Aqoxy7G00691 Aquilegia oxysepala HOM05D006696 ORTHO05D008683 2.2e-250 869.0 588 70.6
Solyc01g091130.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 8.3e-250 867.1 569 71.5
Lsat_1_v5_gn_3_132380 Lactuca sativa HOM05D006696 ORTHO05D008683 7.1e-249 864.0 614 67.3
CsaV3_3G009820 Cucumis sativus L. HOM05D006696 ORTHO05D008683 1.6e-248 862.8 584 70.2
Sed0011228 Sechium edule HOM05D006696 ORTHO05D008683 1.6e-248 862.8 610 68.5
MSTRG.20736 Avicennia marina HOM05D006696 ORTHO05D008683 2.1e-248 862.4 606 67.8
TPR.G7586 Trifolium pratense HOM05D006696 ORTHO05D008683 4.6e-248 861.3 641 67.1
MELO3C006203.2 Cucumis melo HOM05D006696 ORTHO05D008683 1.0e-247 860.1 630 67.5
vmacro21023 Vaccinium macrocarpon HOM05D006696 ORTHO05D008683 1.3e-247 859.8 720 60.4
Eucgr.D02468 Eucalyptus grandis HOM05D006696 ORTHO05D008683 3.0e-247 858.6 616 68.2
Nitab4.5_0010616g0010 Nicotiana tabacum HOM05D006696 ORTHO05D008683 8.6e-247 857.1 658 64.7
AUR62004189 Chenopodium quinoa HOM05D006696 ORTHO05D008683 1.9e-246 855.9 574 69.5
Hund27369 Selenicereus undatus HOM05D006696 ORTHO05D008683 3.3e-246 855.1 583 69.0
SGA_v2.0_scaffold95G28911 Striga asiatica HOM05D006696 ORTHO05D008683 6.2e-245 850.9 629 65.3
MBI12_g20403_MAGBIO Magnolia biondii HOM05D006696 ORTHO05D008683 6.8e-244 847.4 578 70.6
Nitab4.5_0000457g0140 Nicotiana tabacum HOM05D006696 ORTHO05D008683 6.8e-244 847.4 599 67.8
EL10Ac1g00866 Beta vulgaris HOM05D006696 ORTHO05D008683 1.5e-243 846.3 581 69.0
ECA232G1408 Erigeron canadensis HOM05D006696 ORTHO05D008683 1.5e-243 846.3 579 68.9
Ah.05g174590 Amaranthus hybridus HOM05D006696 ORTHO05D008683 4.4e-243 844.7 598 67.4
Aa31LG1G11340 Aethionema arabicum HOM05D006696 ORTHO05D008683 2.4e-241 839.0 570 69.6
unitig_22.g5383 Utricularia gibba HOM05D006696 ORTHO05D008683 2.3e-239 832.4 591 67.0
PSO478G1798 Papaver somniferum HOM05D006696 ORTHO05D008683 4.3e-238 828.2 613 66.1
PSO782G1103 Papaver somniferum HOM05D006696 ORTHO05D008683 5.6e-238 827.8 572 68.5
Duzib177G0277 Durio zibethinus HOM05D006696 ORTHO05D008683 1.4e-236 823.2 573 70.2
Cpa.g.sc611.2 Carica papaya HOM05D006696 ORTHO05D008683 1.3e-234 816.6 555 70.1
Sp1g37340 Schrenkiella parvula HOM05D006696 ORTHO05D008683 4.6e-232 808.1 638 64.3
BcaB07g33486 Brassica carinata HOM05D006696 ORTHO05D008683 5.1e-231 804.7 627 64.6
Lj3g0014279 Lotus japonicus HOM05D006696 ORTHO05D008683 8.7e-231 803.9 585 68.4
A06p03080 Brassica napus HOM05D006696 ORTHO05D008683 9.6e-230 800.4 626 64.2
GSVIVG01027661001 Vitis vinifera HOM05D006696 ORTHO05D008683 2.1e-229 799.3 589 67.6
AL1G10260 Arabidopsis lyrata HOM05D006696 ORTHO05D008683 9.0e-228 793.9 613 64.4
C06p05680 Brassica napus HOM05D006696 ORTHO05D008683 1.5e-227 793.1 630 63.5
BcaC08g43220 Brassica carinata HOM05D006696 ORTHO05D008683 1.3e-226 790.0 631 63.2
BolC6t35679H Brassica oleracea HOM05D006696 ORTHO05D008683 1.3e-226 790.0 631 63.2
SalBow5G3816 Salvia bowleyana HOM05D006696 ORTHO05D008683 8.4e-226 787.3 569 67.0
CDE04G1815 Ceratophyllum demersum HOM05D006696 ORTHO05D008683 4.2e-225 785.0 604 62.9
Carub.0001s0021 Capsella rubella HOM05D006696 ORTHO05D008683 5.4e-225 784.6 595 63.5
BraA06t23521Z Brassica rapa HOM05D006696 ORTHO05D008683 9.3e-225 783.9 623 63.6
Thhalv10007140m.g Eutrema salsugineum HOM05D006696 ORTHO05D008683 6.0e-224 781.2 627 62.0
AT1G02020 Arabidopsis thaliana HOM05D006696 ORTHO05D008683 7.9e-224 780.8 574 65.2
HPP92_022287 Vanilla planifolia HOM05D006696 ORTHO05D008683 3.9e-223 778.5 631 62.3
Sc26g0001290 Simmondsia chinensis HOM05D006696 ORTHO05D008683 1.1e-220 770.4 565 65.3
AUR62013656 Chenopodium quinoa HOM05D006696 ORTHO05D008683 3.1e-204 715.7 572 62.1
Actinidia33475 Actinidia chinensis HOM05D006696 ORTHO05D008683 3.4e-203 712.2 622 58.8
ATR0041G020 Amborella trichopoda HOM05D006696 ORTHO05D008683 1.3e-199 700.3 566 60.4
Os10g0190800 Oryza sativa ssp. japonica HOM05D006696 ORTHO05D008683 6.5e-194 681.4 611 57.6
Zm00001eb145800 Zea mays HOM05D006696 ORTHO05D008683 8.2e-189 664.5 615 55.8
SEGI_31859 Sequoiadendron giganteum HOM05D006696 ORTHO05D008683 5.7e-182 641.7 560 56.2
SMO011G0006 Selaginella moellendorffii HOM05D006696 ORTHO05D008683 8.5e-178 627.9 576 55.2
AagrBONN_evm.TU.Sc2ySwM_228.1723 Anthoceros agrestis HOM05D006696 ORTHO05D008683 2.2e-173 613.2 582 54.1
Mapoly0117s0009 Marchantia polymorpha HOM05D006696 ORTHO05D008683 8.5e-170 601.3 611 52.2
Pp3c18_8320 Physcomitrium patens HOM05D006696 ORTHO05D008683 4.2e-169 599.0 573 53.1
CARHR000330 Cardamine hirsuta HOM05D006696 ORTHO05D008683 8.0e-168 594.7 489 60.5
DCAR_015916 Daucus carota HOM05D006696 ORTHO05D008683 9.8e-158 561.2 373 68.6
Solyc01g091140.4 Solanum lycopersicum HOM05D006696 ORTHO05D008683 2.9e-125 453.4 518 48.3
Dinv32364 Davidia involucrata HOM05D006696 ORTHO05D008683 3.1e-119 433.3 256 78.1
CANSAT21G0759 Cannabis sativa HOM05D006696 ORTHO05D008683 4.6e-99 366.3 210 80.0
Oeu037929.1 Olea europaea HOM05D006696 ORTHO05D008683 7.4e-73 279.3 203 69.0
SGA_v2.0_scaffold581G53050 Striga asiatica HOM05D006696 ORTHO05D008683 1.6e-59 235.0 196 54.1
Sopen01g036900 Solanum pennellii HOM05D006696 ORTHO05D008683 9.7e-57 225.7 216 54.6
CARHR000320 Cardamine hirsuta HOM05D006696 ORTHO05D008683 8.3e-48 196.1 107 81.3
Atru.chr4.660 Acer truncatum HOM05D006696 ORTHO05D030753 1.2e-33 149.1 132 48.5
Zm00001eb027220 Zea mays HOM05D006696 ORTHO05D008683 4.7e-27 127.1 113 53.1
Sopen01g036890 Solanum pennellii HOM05D006696 ORTHO05D008683 8.0e-27 126.3 80 72.5
VMungo0720G2385 Vigna mungo HOM05D006696 ORTHO05D008683 8.3e-24 116.3 65 78.5
VMungo1309G0520 Vigna mungo HOM05D006696 ORTHO05D008683 1.7e-21 108.6 69 71.0
Phvul.010G066778 Phaseolus vulgaris HOM05D006696 ORTHO05D008683 4.4e-17 94.0 100 57.0
SalBow5G1567 Salvia bowleyana HOM05D006696 ORTHO05D008683 1.6e-14 85.5 43 88.4
Cpa.g.sc14.75 Carica papaya HOM05D006696 ORTHO05D008683 6.0e-14 83.6 37 97.3
Atru.chr4.903 Acer truncatum HOM05D006696 ORTHO05D030753 1.2e-11 75.9 39 87.2
Lsat_1_v5_gn_8_142581 Lactuca sativa HOM05D006696 ORTHO05D030753 1.9e-07 62.0 140 32.9


User provided reference genes

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