Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN01G1506 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.4e-148 529.6 273 100.0
FAN03G2743 Fragaria x ananassa HOM05D006270 ORTHO05D007755 5.4e-145 517.7 271 98.9
FAN06G0691 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.8e-143 512.7 271 97.4
FAN06G0861 Fragaria x ananassa HOM05D006270 ORTHO05D007755 1.8e-143 512.7 271 97.4
FAN10G0687 Fragaria x ananassa HOM05D006270 ORTHO05D007755 6.9e-140 500.7 263 98.5
FAN10G3159 Fragaria x ananassa HOM05D006270 ORTHO05D007755 2.6e-139 498.8 263 96.2
RcHm_v2.0_Chr1g0380911 Rosa chinensis HOM05D006270 ORTHO05D007755 2.1e-133 479.2 282 90.1
FvH4_7g31720 Fragaria vesca HOM05D006270 ORTHO05D007755 1.4e-100 370.2 200 97.5
QL09p054436 Quercus lobata HOM05D006270 ORTHO05D007755 3.5e-83 312.4 214 72.0
Glyma.08G240100 Glycine max HOM05D006270 ORTHO05D007755 5.9e-83 311.6 275 60.0
QL09p054318 Quercus lobata HOM05D006270 ORTHO05D007755 5.9e-83 311.6 214 72.0
Glyma.12G002000 Glycine max HOM05D006270 ORTHO05D007755 1.0e-82 310.8 273 59.7
VMungo1127G1589 Vigna mungo HOM05D006270 ORTHO05D007755 2.3e-79 299.7 276 57.2
Dinv03143 Davidia involucrata HOM05D006270 ORTHO05D007755 8.9e-79 297.7 203 72.4
Phvul.011G002300 Phaseolus vulgaris HOM05D006270 ORTHO05D007755 1.5e-78 297.0 196 69.9
Haze_18335 Corylus avellana HOM05D006270 ORTHO05D007755 2.0e-78 296.6 195 73.3
Lj3g0009409 Lotus japonicus HOM05D006270 ORTHO05D007755 7.5e-78 294.7 281 58.0
Rhsim12G0005700 Rhododendron simsii HOM05D006270 ORTHO05D007755 2.2e-77 293.1 243 64.6
Actinidia23030 Actinidia chinensis HOM05D006270 ORTHO05D007755 4.9e-77 292.0 251 61.0
Cfa017859 Carpinus fangiana HOM05D006270 ORTHO05D007755 4.9e-77 292.0 206 68.9
TAR628G1531 Trochodendron aralioides HOM05D006270 ORTHO05D007755 2.4e-76 289.7 219 69.4
Ciclev10021647m.g Citrus clementina HOM05D006270 ORTHO05D007755 1.6e-75 287.0 274 57.3
arahy.Tifrunner.gnm1.ann1.WW5SAZ Arachis hypogaea HOM05D006270 ORTHO05D007755 2.3e-74 283.1 196 68.4
arahy.Tifrunner.gnm1.ann1.3FR1H5 Arachis hypogaea HOM05D006270 ORTHO05D007755 6.6e-74 281.6 196 68.4
GSVIVG01026015001 Vitis vinifera HOM05D006270 ORTHO05D007755 6.6e-74 281.6 209 68.4
Thecc.03G315400 Theobroma cacao HOM05D006270 ORTHO05D007755 1.9e-73 280.0 205 67.3
Gohir.D08G172100 Gossypium hirsutum HOM05D006270 ORTHO05D007755 1.6e-72 276.9 205 66.8
Gorai.004G179400 Gossypium raimondii HOM05D006270 ORTHO05D007755 1.6e-72 276.9 205 66.8
Psat7g147160 Pisum sativum HOM05D006270 ORTHO05D007755 2.1e-72 276.6 249 57.8
TPR.G27896 Trifolium pratense HOM05D006270 ORTHO05D007755 2.8e-72 276.2 199 65.8
CANSAT21G0664 Cannabis sativa HOM05D006270 ORTHO05D007755 6.1e-72 275.0 277 54.9
Potri.005G054600 Populus trichocarpa HOM05D006270 ORTHO05D007755 8.0e-72 274.6 242 58.3
vmacro00974 Vaccinium macrocarpon HOM05D006270 ORTHO05D007755 8.0e-72 274.6 245 61.2
ECA232G4580 Erigeron canadensis HOM05D006270 ORTHO05D007755 1.0e-71 274.2 201 65.7
Cc10_g11640 Coffea canephora HOM05D006270 ORTHO05D007755 3.1e-71 272.7 231 60.2
Nitab4.5_0001579g0030 Nicotiana tabacum HOM05D006270 ORTHO05D007755 4.0e-71 272.3 245 58.8
Gohir.A08G151000 Gossypium hirsutum HOM05D006270 ORTHO05D007755 6.8e-71 271.6 192 68.8
Nitab4.5_0000167g0160 Nicotiana tabacum HOM05D006270 ORTHO05D007755 8.9e-71 271.2 229 62.0
TWI59G0231 Tripterygium wilfordii HOM05D006270 ORTHO05D007755 2.0e-70 270.0 192 68.2
Duzib205G0009 Durio zibethinus HOM05D006270 ORTHO05D007755 3.4e-70 269.2 279 54.8
Atru.chr13.2329 Acer truncatum HOM05D006270 ORTHO05D007755 4.4e-70 268.9 289 52.9
HanXRQChr05g0147941 Helianthus annuus HOM05D006270 ORTHO05D007755 7.5e-70 268.1 203 64.5
Lalb_Chr01g0000131 Lupinus albus HOM05D006270 ORTHO05D007755 1.3e-69 267.3 205 63.4
MSTRG.25449 Avicennia marina HOM05D006270 ORTHO05D007755 2.9e-69 266.2 191 66.0
Migut.C01268 Erythranthe guttata HOM05D006270 ORTHO05D007755 4.9e-69 265.4 203 65.5
Lsat_1_v5_gn_0_7900 Lactuca sativa HOM05D006270 ORTHO05D007755 8.3e-69 264.6 225 59.1
Manes.08G135800 Manihot esculenta HOM05D006270 ORTHO05D007755 1.1e-68 264.2 230 60.9
Prupe.2G311100 Prunus persica HOM05D006270 ORTHO05D007755 1.1e-68 264.2 213 70.9
SGA_v2.0_scaffold24G10562 Striga asiatica HOM05D006270 ORTHO05D007755 1.9e-68 263.5 205 63.4
PGSC0003DMG400014297 Solanum tuberosum HOM05D006270 ORTHO05D007755 5.4e-68 261.9 227 59.9
Sabra05G0047500 Salix brachista HOM05D006270 ORTHO05D007755 1.6e-67 260.4 252 56.0
Sopen03g004530 Solanum pennellii HOM05D006270 ORTHO05D007755 1.6e-67 260.4 229 59.4
PGR102G0747 Punica granatum HOM05D006270 ORTHO05D007755 2.7e-67 259.6 196 68.9
Sc23g0001640 Simmondsia chinensis HOM05D006270 ORTHO05D007755 2.7e-67 259.6 270 54.1
DCAR_028408 Daucus carota HOM05D006270 ORTHO05D007755 3.5e-67 259.2 206 63.6
Aqoxy6G00085 Aquilegia oxysepala HOM05D006270 ORTHO05D007755 6.0e-67 258.5 204 65.7
Oeu032990.1 Olea europaea HOM05D006270 ORTHO05D007755 1.0e-66 257.7 195 65.1
Solyc03g025710.3 Solanum lycopersicum HOM05D006270 ORTHO05D007755 1.3e-66 257.3 212 61.8
PSO170G6113 Papaver somniferum HOM05D006270 ORTHO05D007755 2.3e-66 256.5 201 65.7
CiPaw.16G073500 Carya illinoinensis HOM05D006270 ORTHO05D007755 3.9e-66 255.8 225 59.1
ClCG09G010100 Citrullus lanatus HOM05D006270 ORTHO05D007755 3.9e-66 255.8 228 56.6
SalBow7G0089 Salvia bowleyana HOM05D006270 ORTHO05D007755 6.6e-66 255.0 196 63.8
AUR62023526 Chenopodium quinoa HOM05D006270 ORTHO05D007755 1.5e-65 253.8 247 56.3
Eucgr.F02983 Eucalyptus grandis HOM05D006270 ORTHO05D007755 1.5e-65 253.8 199 65.3
CAN.G307.5 Capsicum annuum HOM05D006270 ORTHO05D007755 3.3e-65 252.7 226 55.3
C06p35210 Brassica napus HOM05D006270 ORTHO05D007755 9.5e-65 251.1 197 64.0
PSO782G5577 Papaver somniferum HOM05D006270 ORTHO05D007755 4.7e-64 248.8 199 64.3
BcaC08g45741 Brassica carinata HOM05D006270 ORTHO05D007755 6.2e-64 248.4 197 63.5
A07p30450 Brassica napus HOM05D006270 ORTHO05D007755 6.2e-64 248.4 197 63.5
BolC6t38627H Brassica oleracea HOM05D006270 ORTHO05D007755 6.2e-64 248.4 197 63.5
ATR1136G034 Amborella trichopoda HOM05D006270 ORTHO05D007755 8.0e-64 248.1 186 65.1
BraA07t30681Z Brassica rapa HOM05D006270 ORTHO05D007755 8.0e-64 248.1 197 63.5
BcaB03g15641 Brassica carinata HOM05D006270 ORTHO05D007755 1.1e-63 247.7 197 63.5
CsaV3_7G024750 Cucumis sativus L. HOM05D006270 ORTHO05D007755 1.4e-63 247.3 195 60.0
Cpa.g.sc66.22 Carica papaya HOM05D006270 ORTHO05D007755 1.5e-62 243.8 240 55.0
Sp5g27100 Schrenkiella parvula HOM05D006270 ORTHO05D007755 3.4e-62 242.7 196 62.2
CARHR064850 Cardamine hirsuta HOM05D006270 ORTHO05D007755 5.8e-62 241.9 196 62.2
Thhalv10019029m.g Eutrema salsugineum HOM05D006270 ORTHO05D007755 9.8e-62 241.1 196 62.8
Peaxi162Scf01013g00026 Petunia axillaris HOM05D006270 ORTHO05D007755 9.8e-62 241.1 207 56.0
Aa31LG4G10780 Aethionema arabicum HOM05D006270 ORTHO05D007755 1.7e-61 240.4 256 52.3
Carub.0002s1881 Capsella rubella HOM05D006270 ORTHO05D007755 1.7e-61 240.4 196 63.3
AL2G31660 Arabidopsis lyrata HOM05D006270 ORTHO05D007755 2.2e-61 240.0 196 63.3
AT1G72030 Arabidopsis thaliana HOM05D006270 ORTHO05D007755 2.9e-61 239.6 196 63.3
Sed0023542 Sechium edule HOM05D006270 ORTHO05D007755 4.9e-61 238.8 203 58.6
EL10Ac1g00156 Beta vulgaris HOM05D006270 ORTHO05D007755 1.1e-60 237.7 206 58.3
THA.LOC104809733 Tarenaya hassleriana HOM05D006270 ORTHO05D007755 3.2e-60 236.1 196 60.7
Os07g0264800 Oryza sativa ssp. japonica HOM05D006270 ORTHO05D007755 1.6e-59 233.8 217 56.7
COL.COLO4_16875 Corchorus olitorius HOM05D006270 ORTHO05D007755 1.7e-58 230.3 156 71.2
Nitab4.5_0000167g0150 Nicotiana tabacum HOM05D006270 ORTHO05D007755 3.0e-58 229.6 231 54.5
Nitab4.5_0001579g0080 Nicotiana tabacum HOM05D006270 ORTHO05D007755 1.1e-57 227.6 235 54.0
Nn5g27482 Nelumbo nucifera HOM05D006270 ORTHO05D007755 9.5e-57 224.6 182 63.7
unitig_8.g2905 Utricularia gibba HOM05D006270 ORTHO05D007755 6.2e-56 221.9 194 57.7
SEGI_40158 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 2.0e-54 216.9 200 54.5
HPP92_002765 Vanilla planifolia HOM05D006270 ORTHO05D007755 5.8e-54 215.3 191 57.6
SMO352G0005 Selaginella moellendorffii HOM05D006270 ORTHO05D007755 4.9e-53 212.2 195 52.8
Ca_19683_v3 Cicer arietinum L. HOM05D006270 ORTHO05D007755 4.6e-51 205.7 144 66.7
Sopen11g010160 Solanum pennellii HOM05D006270 ORTHO05D007755 1.0e-50 204.5 185 52.4
PGSC0003DMG400034528 Solanum tuberosum HOM05D006270 ORTHO05D007755 1.3e-50 204.1 188 53.2
PGSC0003DMG400007305 Solanum tuberosum HOM05D006270 ORTHO05D007755 8.6e-50 201.4 200 53.5
Pp3c3_19510 Physcomitrium patens HOM05D006270 ORTHO05D007755 1.5e-49 200.7 193 54.4
Lj7A621T38 Lonicera japonica HOM05D006270 ORTHO05D007755 1.6e-48 197.2 146 63.7
CAN.G1280.16 Capsicum annuum HOM05D006270 ORTHO05D007755 1.1e-47 194.5 192 53.6
Mapoly0148s0033 Marchantia polymorpha HOM05D006270 ORTHO05D007755 3.1e-39 166.4 179 47.5
CSS0031567 Camellia sinensis var. sinensis HOM05D006270 ORTHO05D007755 2.6e-38 163.3 203 48.8
MD01G1220200 Malus domestica HOM05D006270 ORTHO05D007755 8.4e-37 158.3 142 68.3
CDE04G3476 Ceratophyllum demersum HOM05D006270 ORTHO05D007755 9.3e-36 154.8 183 46.4
AUR62004580 Chenopodium quinoa HOM05D006270 ORTHO05D007755 3.0e-34 149.8 110 67.3
MELO3C024085.2 Cucumis melo HOM05D006270 ORTHO05D007755 9.6e-33 144.8 129 55.0
Zm00001eb304740 Zea mays HOM05D006270 ORTHO05D007755 1.3e-32 144.4 140 56.4
MBI06_g06704_MAGBIO Magnolia biondii HOM05D006270 ORTHO05D007755 4.8e-32 142.5 151 53.0
SEGI_10565 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 5.8e-30 135.6 133 55.6
SEGI_32338 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 3.2e-28 129.8 117 58.1
Solyc11g020000.1 Solanum lycopersicum HOM05D006270 ORTHO05D007755 1.8e-26 124.0 185 37.3
AagrBONN_evm.TU.Sc2ySwM_228.4762 Anthoceros agrestis HOM05D006270 ORTHO05D007755 5.1e-26 122.5 142 51.4
Ah.05g178770 Amaranthus hybridus HOM05D006270 ORTHO05D007755 7.4e-25 118.6 140 47.1
Nitab4.5_0000329g0020 Nicotiana tabacum HOM05D006270 ORTHO05D007755 4.0e-23 112.8 129 51.2
SEGI_00952 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 8.4e-21 105.1 114 52.6
GSVIVG01026021001 Vitis vinifera HOM05D000026 ORTHO05D001436 1.1e-20 104.8 70 71.4
CBR_g50390 Chara braunii HOM05D000019 ORTHO05D000002 5.5e-20 102.4 110 43.6
Cre06.g269100 Chlamydomonas reinhardtii HOM05D006270 ORTHO05D007755 4.6e-19 99.4 216 31.9
SEGI_26224 Sequoiadendron giganteum HOM05D006270 ORTHO05D007755 2.4e-15 87.0 97 53.6
MCO03G108 Micromonas commoda HOM05D006270 ORTHO05D007755 7.9e-11 72.0 181 33.1
GSVIVG01026018001 Vitis vinifera HOM05D006270 ORTHO05D007755 1.8e-10 70.9 46 69.6
Cre16.g662650 Chlamydomonas reinhardtii HOM05D002510 ORTHO05D006928 1.1e-07 61.6 128 32.8
MCO16G519 Micromonas commoda HOM05D006270 ORTHO05D007755 5.3e-07 59.3 87 34.5
MCO01G622 Micromonas commoda HOM05D004023 ORTHO05D004681 1.5e-06 57.8 98 28.6
SEGI_16930 Sequoiadendron giganteum HOM05D005733 ORTHO05D007442 4.5e-06 56.2 78 30.8


User provided reference genes

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