Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN01G1406 Fragaria x ananassa HOM05D007397 ORTHO05D009336 2.6e-93 345.5 193 100.0
FAN01G1537 Fragaria x ananassa HOM05D007397 ORTHO05D009336 6.0e-90 334.3 187 99.5
FAN03G3257 Fragaria x ananassa HOM05D007397 ORTHO05D009336 1.4e-86 323.2 187 90.9
RcHm_v2.0_Chr1g0365021 Rosa chinensis HOM05D007397 ORTHO05D009336 3.3e-72 275.4 190 85.8
FAN10G1155 Fragaria x ananassa HOM05D007397 ORTHO05D009336 7.4e-72 274.2 174 87.4
MD07G1184800 Malus domestica HOM05D007397 ORTHO05D009336 3.8e-60 235.3 189 75.1
Prupe.2G224700 Prunus persica HOM05D007397 ORTHO05D009336 4.4e-56 221.9 190 72.1
CANSAT64G2695 Cannabis sativa HOM05D007397 ORTHO05D009336 6.3e-55 218.0 184 65.2
Haze_16973 Corylus avellana HOM05D007397 ORTHO05D009336 8.2e-55 217.6 188 62.2
CiPaw.01G279900 Carya illinoinensis HOM05D007397 ORTHO05D009336 4.1e-54 215.3 189 63.0
Cfa001558 Carpinus fangiana HOM05D007397 ORTHO05D009336 1.6e-53 213.4 184 63.0
TAR320G0002 Trochodendron aralioides HOM05D007397 ORTHO05D009336 4.5e-53 211.8 187 62.0
MELO3C025487.2 Cucumis melo HOM05D007397 ORTHO05D009336 1.0e-52 210.7 178 63.5
Medtr1g115740 Medicago truncatula HOM05D007397 ORTHO05D009336 1.9e-51 206.5 189 60.3
Glyma.04G095200 Glycine max HOM05D007397 ORTHO05D009336 3.2e-51 205.7 192 58.9
Ca_11323_v3 Cicer arietinum L. HOM05D007397 ORTHO05D009336 7.2e-51 204.5 189 60.8
ClCG09G020320 Citrullus lanatus HOM05D007397 ORTHO05D009336 7.2e-51 204.5 178 62.4
MBI05_g32638_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 7.2e-51 204.5 153 69.3
Lj5g0010768 Lotus japonicus HOM05D007397 ORTHO05D009336 9.4e-51 204.1 183 61.7
Glyma.06G097000 Glycine max HOM05D007397 ORTHO05D009336 2.1e-50 203.0 192 57.8
QL08p057549 Quercus lobata HOM05D007397 ORTHO05D009336 6.1e-50 201.4 188 67.0
Cpa.g.sc1.304 Carica papaya HOM05D007397 ORTHO05D009336 1.4e-49 200.3 182 65.4
EL10Ac2g03499 Beta vulgaris HOM05D007397 ORTHO05D009336 8.8e-49 197.6 172 62.8
GSVIVG01032626001 Vitis vinifera HOM05D007397 ORTHO05D009336 1.2e-48 197.2 205 57.1
Actinidia38224 Actinidia chinensis HOM05D007397 ORTHO05D009336 1.5e-48 196.8 180 62.8
CSS0023256 Camellia sinensis var. sinensis HOM05D007397 ORTHO05D009336 2.0e-48 196.4 183 60.1
Phvul.009G036400 Phaseolus vulgaris HOM05D007397 ORTHO05D009336 4.4e-48 195.3 188 61.7
Lalb_Chr06g0164111 Lupinus albus HOM05D007397 ORTHO05D009336 9.7e-48 194.1 183 58.5
Psat6g239080 Pisum sativum HOM05D007397 ORTHO05D009336 1.3e-47 193.7 187 58.3
AUR62042666 Chenopodium quinoa HOM05D007397 ORTHO05D009336 1.7e-47 193.4 168 61.9
PGR142G1402 Punica granatum HOM05D007397 ORTHO05D009336 1.7e-47 193.4 193 63.7
Aqoxy5G01687 Aquilegia oxysepala HOM05D007397 ORTHO05D009336 2.2e-47 193.0 199 56.3
VMungo1309G1572 Vigna mungo HOM05D007397 ORTHO05D009336 3.7e-47 192.2 188 62.2
Potri.010G213600 Populus trichocarpa HOM05D007397 ORTHO05D009336 6.3e-47 191.4 196 63.3
Hma1.2p1_0348F.1_g131665 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 1.8e-46 189.9 186 62.9
Hma1.2p1_0348F.1_g131670 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 1.8e-46 189.9 186 62.9
TWI38G1005 Tripterygium wilfordii HOM05D007397 ORTHO05D009336 1.8e-46 189.9 185 60.5
Lj1P929T40 Lonicera japonica HOM05D007397 ORTHO05D009336 2.4e-46 189.5 146 67.8
PGSC0003DMG400011470 Solanum tuberosum HOM05D007397 ORTHO05D009336 3.1e-46 189.1 175 61.1
Solyc04g010190.1 Solanum lycopersicum HOM05D007397 ORTHO05D009336 4.1e-46 188.7 175 64.6
Rhsim09G0155900 Rhododendron simsii HOM05D007397 ORTHO05D009336 5.3e-46 188.3 175 60.0
CsaV3_5G026110 Cucumis sativus L. HOM05D007397 ORTHO05D009336 7.0e-46 188.0 170 61.2
TPR.G10388 Trifolium pratense HOM05D007397 ORTHO05D009336 7.0e-46 188.0 189 56.1
Cc02_g08640 Coffea canephora HOM05D007397 ORTHO05D009336 1.2e-45 187.2 188 58.5
Migut.L01413 Erythranthe guttata HOM05D007397 ORTHO05D009336 1.6e-45 186.8 171 62.0
SGA_v2.0_scaffold165G38243 Striga asiatica HOM05D007397 ORTHO05D009336 1.6e-45 186.8 195 56.9
A05p37050 Brassica napus HOM05D007397 ORTHO05D009336 2.0e-45 186.4 174 59.8
Sopen04g005370 Solanum pennellii HOM05D007397 ORTHO05D009336 2.7e-45 186.0 177 63.8
Sabra08G0033900 Salix brachista HOM05D007397 ORTHO05D009336 4.5e-45 185.3 188 59.6
BraA05t22502Z Brassica rapa HOM05D007397 ORTHO05D009336 5.9e-45 184.9 176 58.5
C05p55480 Brassica napus HOM05D007397 ORTHO05D009336 1.0e-44 184.1 174 59.8
BolC5t34214H Brassica oleracea HOM05D007397 ORTHO05D009336 1.0e-44 184.1 174 59.8
MSTRG.7898 Avicennia marina HOM05D007397 ORTHO05D009336 1.3e-44 183.7 186 58.1
Sed0011140 Sechium edule HOM05D007397 ORTHO05D009336 1.7e-44 183.3 183 61.2
BcaC05g29269 Brassica carinata HOM05D007397 ORTHO05D009336 2.2e-44 183.0 173 59.5
CARHR086880 Cardamine hirsuta HOM05D007397 ORTHO05D009336 2.2e-44 183.0 176 59.7
Nn2g12828 Nelumbo nucifera HOM05D007397 ORTHO05D009336 2.9e-44 182.6 195 53.8
Potri.008G047800 Populus trichocarpa HOM05D007397 ORTHO05D009336 3.8e-44 182.2 171 62.0
Carub.0003s1170 Capsella rubella HOM05D007397 ORTHO05D009336 8.5e-44 181.0 182 58.2
HanXRQChr14g0460741 Helianthus annuus HOM05D007397 ORTHO05D009336 8.5e-44 181.0 179 59.2
Thecc.10G062300 Theobroma cacao HOM05D007397 ORTHO05D009336 1.1e-43 180.6 197 56.9
SalBow2G2387 Salvia bowleyana HOM05D007397 ORTHO05D009336 1.9e-43 179.9 183 61.7
Oeu044824.1 Olea europaea HOM05D007397 ORTHO05D009336 2.5e-43 179.5 192 52.6
Sp3g10540 Schrenkiella parvula HOM05D007397 ORTHO05D009336 5.5e-43 178.3 179 58.1
AT3G12345 Arabidopsis thaliana HOM05D007397 ORTHO05D009336 7.2e-43 177.9 179 58.7
Lsat_1_v5_gn_2_115220 Lactuca sativa HOM05D005234 ORTHO05D006583 9.4e-43 177.6 172 61.0
DCAR_015250 Daucus carota HOM05D007397 ORTHO05D009336 2.1e-42 176.4 129 68.2
PSO339G5749 Papaver somniferum HOM05D007397 ORTHO05D009336 4.7e-42 175.3 198 57.1
AL3G23990 Arabidopsis lyrata HOM05D007397 ORTHO05D009336 8.0e-42 174.5 183 58.5
PSO384G5114 Papaver somniferum HOM05D007397 ORTHO05D009336 8.0e-42 174.5 201 55.7
THA.LOC104827311 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 8.0e-42 174.5 175 57.7
Gohir.A10G209700 Gossypium hirsutum HOM05D007397 ORTHO05D009336 1.8e-41 173.3 130 73.8
Gorai.011G244600 Gossypium raimondii HOM05D007397 ORTHO05D009336 1.8e-41 173.3 155 65.8
THA.LOC104809886 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 4.0e-41 172.2 181 57.5
BcaB04g21083 Brassica carinata HOM05D007397 ORTHO05D009336 5.2e-41 171.8 190 58.4
BcaB04g21085 Brassica carinata HOM05D007397 ORTHO05D009336 5.2e-41 171.8 190 58.4
Thhalv10021616m.g Eutrema salsugineum HOM05D007397 ORTHO05D009336 5.2e-41 171.8 176 58.0
Gohir.D10G218000 Gossypium hirsutum HOM05D007397 ORTHO05D009336 1.2e-40 170.6 155 58.7
Aa31sc153G60 Aethionema arabicum HOM05D007397 ORTHO05D009336 9.8e-40 167.5 179 59.8
MBI05_g30757_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 1.7e-39 166.8 143 63.6
Sc06g0001870 Simmondsia chinensis HOM05D007397 ORTHO05D009336 2.8e-39 166.0 142 62.7
CAN.G1557.1 Capsicum annuum HOM05D007397 ORTHO05D009336 6.3e-39 164.9 116 70.7
Dinv25942 Davidia involucrata HOM05D007397 ORTHO05D009336 1.1e-38 164.1 168 58.9
Atru.chr12.591 Acer truncatum HOM05D007397 ORTHO05D009336 5.4e-38 161.8 196 52.0
ATR0681G332 Amborella trichopoda HOM05D007397 ORTHO05D009336 7.0e-38 161.4 180 51.7
unitig_22.g6935 Utricularia gibba HOM05D007397 ORTHO05D009336 2.7e-37 159.5 186 54.3
Nitab4.5_0007221g0040 Nicotiana tabacum HOM05D007397 ORTHO05D009336 3.5e-37 159.1 189 58.7
CDE02G3908 Ceratophyllum demersum HOM05D001333 ORTHO05D001208 1.0e-36 157.5 159 56.6
AUR62025539 Chenopodium quinoa HOM05D007397 ORTHO05D009336 2.3e-36 156.4 167 53.9
Duzib106G0993 Durio zibethinus HOM05D007397 ORTHO05D009336 3.3e-35 152.5 118 72.9
COL.COLO4_37769 Corchorus olitorius HOM05D007397 ORTHO05D009336 4.2e-35 152.1 201 53.7
Manes.10G039600 Manihot esculenta HOM05D007397 ORTHO05D009336 3.0e-33 146.0 96 74.0
Ciclev10034008m.g Citrus clementina HOM05D007397 ORTHO05D009336 1.2e-32 144.1 89 73.0
Peaxi162Scf00135g00025 Petunia axillaris HOM05D007397 ORTHO05D009336 3.7e-31 139.0 90 75.6
HPP92_025097 Vanilla planifolia HOM05D007397 ORTHO05D009336 4.1e-30 135.6 182 44.5
SEGI_38306 Sequoiadendron giganteum HOM05D007397 ORTHO05D009336 5.9e-29 131.7 202 40.6
Nitab4.5_0006737g0020 Nicotiana tabacum HOM05D007397 ORTHO05D009336 1.5e-27 127.1 154 58.4
ECA238G2043 Erigeron canadensis HOM05D005234 ORTHO05D006583 3.3e-27 125.9 142 55.6
Mapoly0043s0078 Marchantia polymorpha HOM05D007397 ORTHO05D009336 5.6e-27 125.2 132 48.5
Cfa009156 Carpinus fangiana HOM05D007397 ORTHO05D009336 3.6e-26 122.5 130 55.4
Os06g0484500 Oryza sativa ssp. japonica HOM05D007397 ORTHO05D009336 1.7e-23 113.6 148 52.0
Zm00001eb397310 Zea mays HOM05D007397 ORTHO05D009336 2.2e-23 113.2 197 44.7
SMO229G0021 Selaginella moellendorffii HOM05D007397 ORTHO05D009336 4.1e-22 109.0 126 43.7
Duzib114G0919 Durio zibethinus HOM05D007397 ORTHO05D009336 1.5e-16 90.5 128 47.7
AagrBONN_evm.TU.Sc2ySwM_368.51 Anthoceros agrestis HOM05D007397 ORTHO05D009336 7.5e-16 88.2 73 57.5
C03p57580 Brassica napus HOM05D007397 ORTHO05D009336 1.3e-12 77.4 114 41.2
BcaC03g17725 Brassica carinata HOM05D007397 ORTHO05D009336 4.3e-11 72.4 108 41.7
Lsat_1_v5_gn_7_115640 Lactuca sativa HOM05D018034 ORTHO05D006583 3.7e-07 59.3 104 47.1


User provided reference genes

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