Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN01G1364 Fragaria x ananassa HOM05D007229 ORTHO05D009131 1.1e-96 356.7 182 100.0
FvH4_7g25840 Fragaria vesca HOM05D007229 ORTHO05D009131 3.6e-52 208.8 114 96.5
FAN06G3440 Fragaria x ananassa HOM05D007229 ORTHO05D009131 3.6e-52 208.8 114 96.5
RcHm_v2.0_Chr1g0372111 Rosa chinensis HOM05D007229 ORTHO05D009131 6.2e-44 181.4 114 86.0
Prupe.2G263300 Prunus persica HOM05D007229 ORTHO05D009131 1.3e-38 163.7 114 78.9
MD07G1232800 Malus domestica HOM05D007229 ORTHO05D009131 6.4e-33 144.8 117 74.4
FAN10G1108 Fragaria x ananassa HOM05D007229 ORTHO05D209585 2.5e-29 132.9 84 77.4
Haze_17350 Corylus avellana HOM05D000154 ORTHO05D000092 4.3e-29 132.1 111 66.7
QL08p064765 Quercus lobata HOM05D007229 ORTHO05D009131 2.2e-25 119.8 111 60.4
Hma1.2p1_2086F.1_g313730 Hydrangea macrophylla HOM05D007229 ORTHO05D009131 1.9e-24 116.7 112 60.7
arahy.Tifrunner.gnm1.ann1.B9ILCP Arachis hypogaea HOM05D007229 ORTHO05D009131 3.2e-24 115.9 113 62.8
Lj1g0022940 Lotus japonicus HOM05D007229 ORTHO05D009131 5.4e-24 115.2 111 63.1
Thecc.10G183800 Theobroma cacao HOM05D007229 ORTHO05D009131 9.3e-24 114.4 111 61.3
GSVIVG01032702001 Vitis vinifera HOM05D007229 ORTHO05D009131 1.6e-23 113.6 111 59.5
arahy.Tifrunner.gnm1.ann1.I1HNZH Arachis hypogaea HOM05D007229 ORTHO05D009131 2.1e-23 113.2 113 62.8
Dinv26059 Davidia involucrata HOM05D007229 ORTHO05D009131 2.7e-23 112.8 113 61.1
SabraUnG0004000 Salix brachista HOM05D007229 ORTHO05D009131 2.7e-23 112.8 111 60.4
Sabra19G0072100 Salix brachista HOM05D007229 ORTHO05D009131 7.8e-23 111.3 111 60.4
Lsat_1_v5_gn_8_13541 Lactuca sativa HOM05D007229 ORTHO05D009131 1.0e-22 110.9 114 60.5
Glyma.04G221700 Glycine max HOM05D007229 ORTHO05D009131 1.3e-22 110.5 111 58.6
Potri.019G056400 Populus trichocarpa HOM05D007229 ORTHO05D009131 1.3e-22 110.5 111 58.6
TWI53G0143 Tripterygium wilfordii HOM05D007229 ORTHO05D009131 1.7e-22 110.2 111 60.4
Lalb_Chr11g0067841 Lupinus albus HOM05D007229 ORTHO05D009131 2.3e-22 109.8 111 57.7
Manes.07G139500 Manihot esculenta HOM05D007229 ORTHO05D009131 1.1e-21 107.5 112 58.9
Glyma.06G143700 Glycine max HOM05D007229 ORTHO05D009131 1.5e-21 107.1 111 56.8
Duzib114G0482 Durio zibethinus HOM05D007229 ORTHO05D009131 1.9e-21 106.7 112 56.2
COL.COLO4_19452 Corchorus olitorius HOM05D007229 ORTHO05D009131 2.5e-21 106.3 111 56.8
CSS0032880 Camellia sinensis var. sinensis HOM05D007229 ORTHO05D009131 3.3e-21 105.9 113 56.6
Phvul.009G142501 Phaseolus vulgaris HOM05D007229 ORTHO05D009131 3.3e-21 105.9 111 56.8
ECA233G6234 Erigeron canadensis HOM05D007229 ORTHO05D009131 4.3e-21 105.5 78 73.1
Rhsim09G0184500 Rhododendron simsii HOM05D007229 ORTHO05D009131 4.3e-21 105.5 116 56.0
Ciclev10033477m.g Citrus clementina HOM05D007229 ORTHO05D009131 7.3e-21 104.8 108 57.4
Lj1A965T45 Lonicera japonica HOM05D007229 ORTHO05D009131 7.3e-21 104.8 113 50.4
VMungo1309G1820 Vigna mungo HOM05D007229 ORTHO05D009131 9.6e-21 104.4 112 57.1
HanXRQChr08g0222581 Helianthus annuus HOM05D007229 ORTHO05D009131 3.6e-20 102.4 118 58.5
PSO339G1638 Papaver somniferum HOM05D007229 ORTHO05D009131 3.6e-20 102.4 75 72.0
PSO384G2154 Papaver somniferum HOM05D007229 ORTHO05D009131 3.6e-20 102.4 75 72.0
Sopen06g015630 Solanum pennellii HOM05D007229 ORTHO05D009131 3.6e-20 102.4 114 56.1
Manes.10G004800 Manihot esculenta HOM05D007229 ORTHO05D009131 1.1e-19 100.9 112 54.5
PGSC0003DMG400024310 Solanum tuberosum HOM05D007229 ORTHO05D009131 1.1e-19 100.9 114 57.0
SEGI_31216 Sequoiadendron giganteum HOM05D007229 ORTHO05D009131 2.4e-19 99.8 109 53.2
TPR.G16113 Trifolium pratense HOM05D007229 ORTHO05D009131 2.4e-19 99.8 112 54.5
TAR369G0442 Trochodendron aralioides HOM05D007229 ORTHO05D009131 2.4e-19 99.8 111 53.2
Gohir.A05G403900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 5.3e-19 98.6 111 57.7
MBI15_g35108_MAGBIO Magnolia biondii HOM05D007229 ORTHO05D009131 5.3e-19 98.6 112 54.5
Actinidia00993 Actinidia chinensis HOM05D007229 ORTHO05D009131 6.9e-19 98.2 115 55.7
Gohir.D04G011900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 6.9e-19 98.2 111 57.7
Gorai.012G014100 Gossypium raimondii HOM05D007229 ORTHO05D009131 6.9e-19 98.2 111 57.7
PGR044G2361 Punica granatum HOM05D007229 ORTHO05D009131 9.0e-19 97.8 115 53.9
Cc02_g05510 Coffea canephora HOM05D007229 ORTHO05D009131 3.4e-18 95.9 112 51.8
Peaxi162Scf00739g00125 Petunia axillaris HOM05D000154 ORTHO05D000092 5.8e-18 95.1 118 50.8
Psat5g069080 Pisum sativum HOM05D007229 ORTHO05D009131 5.8e-18 95.1 112 52.7
MSTRG.27273 Avicennia marina HOM05D007229 ORTHO05D009131 7.6e-18 94.7 112 52.7
CiPaw.01G306000 Carya illinoinensis HOM05D007229 ORTHO05D009131 7.6e-18 94.7 116 53.4
ClCG07G004950 Citrullus lanatus HOM05D007229 ORTHO05D009131 9.9e-18 94.4 107 53.3
Hund13463 Selenicereus undatus HOM05D007229 ORTHO05D009131 9.9e-18 94.4 114 55.3
Medtr3g094080 Medicago truncatula HOM05D007229 ORTHO05D009131 1.7e-17 93.6 113 51.3
AagrBONN_evm.TU.Sc2ySwM_344.3614 Anthoceros agrestis HOM05D007229 ORTHO05D009131 2.9e-17 92.8 74 73.0
EL10Ac2g04250 Beta vulgaris HOM05D007229 ORTHO05D009131 3.8e-17 92.4 134 47.8
Oeu020108.1 Olea europaea HOM05D007229 ORTHO05D009131 3.8e-17 92.4 114 49.1
SGA_v2.0_scaffold60G20901 Striga asiatica HOM05D007229 ORTHO05D009131 4.9e-17 92.0 62 75.8
CDE12G0285 Ceratophyllum demersum HOM05D007229 ORTHO05D009131 1.1e-16 90.9 63 74.6
DCAR_019811 Daucus carota HOM05D007229 ORTHO05D009131 3.2e-16 89.4 62 75.8
Duzib106G0259 Durio zibethinus HOM05D007229 ORTHO05D009131 5.4e-16 88.6 76 65.8
SMO230G0076 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 5.4e-16 88.6 60 76.7
MELO3C020131.2 Cucumis melo HOM05D007229 ORTHO05D009131 7.1e-16 88.2 106 51.9
Mapoly0032s0114 Marchantia polymorpha HOM05D007229 ORTHO05D009131 1.6e-15 87.0 53 83.0
SalBow3G2298 Salvia bowleyana HOM05D007229 ORTHO05D009131 1.6e-15 87.0 88 61.4
Sed0026302 Sechium edule HOM05D007229 ORTHO05D009131 1.6e-15 87.0 109 52.3
SMO230G0102 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 1.6e-15 87.0 60 75.0
SMO230G0113 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 1.6e-15 87.0 60 75.0
Sp5g06210 Schrenkiella parvula HOM05D007229 ORTHO05D009131 2.1e-15 86.7 111 50.5
Sc14g0005610 Simmondsia chinensis HOM05D007229 ORTHO05D009131 2.1e-15 86.7 112 51.8
BolC6t37520H Brassica oleracea HOM05D007229 ORTHO05D009131 3.5e-15 85.9 112 50.9
CsaV3_5G010830 Cucumis sativus L. HOM05D007229 ORTHO05D009131 3.5e-15 85.9 106 52.8
HPP92_017919 Vanilla planifolia HOM05D007229 ORTHO05D009131 3.5e-15 85.9 67 71.6
BcaC08g44777 Brassica carinata HOM05D007229 ORTHO05D009131 4.6e-15 85.5 112 50.9
A07p22880 Brassica napus HOM05D007229 ORTHO05D009131 4.6e-15 85.5 112 50.9
BraA07t29954Z Brassica rapa HOM05D007229 ORTHO05D009131 4.6e-15 85.5 112 50.9
ATR0681G125 Amborella trichopoda HOM05D007229 ORTHO05D009131 6.0e-15 85.1 63 71.4
BcaC07g39946 Brassica carinata HOM05D007229 ORTHO05D009131 6.0e-15 85.1 112 50.9
A09p49260 Brassica napus HOM05D007229 ORTHO05D009131 6.0e-15 85.1 112 50.9
C08p31620 Brassica napus HOM05D007229 ORTHO05D009131 6.0e-15 85.1 112 50.9
BolC8t50783H Brassica oleracea HOM05D007229 ORTHO05D009131 6.0e-15 85.1 112 50.9
BraA09t40379Z Brassica rapa HOM05D007229 ORTHO05D009131 6.0e-15 85.1 112 50.9
Solyc06g050170.4 Solanum lycopersicum HOM05D000154 ORTHO05D000092 6.0e-15 85.1 115 49.6
CARHR166450 Cardamine hirsuta HOM05D007229 ORTHO05D009131 7.9e-15 84.7 111 50.5
Migut.F00594 Erythranthe guttata HOM05D007229 ORTHO05D009131 1.3e-14 84.0 55 74.5
BcaB01g00004 Brassica carinata HOM05D007229 ORTHO05D009131 1.8e-14 83.6 112 50.9
BcaB01g00005 Brassica carinata HOM05D007229 ORTHO05D009131 1.8e-14 83.6 112 50.9
C06p23470 Brassica napus HOM05D007229 ORTHO05D009131 1.8e-14 83.6 112 50.9
Cpa.g.sc19.82 Carica papaya HOM05D007229 ORTHO05D009131 1.8e-14 83.6 96 54.2
Aqoxy2G00722 Aquilegia oxysepala HOM05D007229 ORTHO05D009131 2.3e-14 83.2 73 63.0
Pp3c19_14460 Physcomitrium patens HOM05D007229 ORTHO05D009131 2.3e-14 83.2 54 77.8
Os01g0823600 Oryza sativa ssp. japonica HOM05D007229 ORTHO05D009131 3.9e-14 82.4 65 70.8
CAN.G55.3 Capsicum annuum HOM05D007229 ORTHO05D009131 1.1e-13 80.9 54 75.9
Zm00001eb149430 Zea mays HOM05D007229 ORTHO05D009131 1.5e-13 80.5 111 46.8
Carub.0005s2307 Capsella rubella HOM05D007229 ORTHO05D009131 1.9e-13 80.1 111 49.5
THA.LOC104824356 Tarenaya hassleriana HOM05D007229 ORTHO05D009131 4.3e-13 79.0 53 77.4
AT3G56290 Arabidopsis thaliana HOM05D007229 ORTHO05D009131 5.6e-13 78.6 110 44.5
AUR62012362 Chenopodium quinoa HOM05D007229 ORTHO05D009131 2.8e-12 76.3 110 44.5
AL5G37620 Arabidopsis lyrata HOM05D007229 ORTHO05D009131 3.6e-12 75.9 111 45.9
Thhalv10006268m.g Eutrema salsugineum HOM05D007229 ORTHO05D009131 1.1e-11 74.3 111 45.0
Aa31LG10G11190 Aethionema arabicum HOM05D007229 ORTHO05D009131 3.1e-11 72.8 115 45.2
Eucgr.J00129 Eucalyptus grandis HOM05D007229 ORTHO05D009131 4.0e-11 72.4 91 52.7
AUR62031491 Chenopodium quinoa HOM05D000154 ORTHO05D000092 7.6e-10 68.2 48 68.8
BcaB02g07659 Brassica carinata HOM05D007229 ORTHO05D009131 4.9e-09 65.5 118 40.7
Nitab4.5_0003695g0030 Nicotiana tabacum HOM05D007229 ORTHO05D009131 1.3e-06 57.4 113 41.6
Ah.10g035980 Amaranthus hybridus HOM05D007229 ORTHO05D009131 3.0e-06 56.2 99 40.4
Nitab4.5_0000109g0540 Nicotiana tabacum HOM05D000154 ORTHO05D009131 6.7e-06 55.1 114 39.5


User provided reference genes

Program Settings