Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN01G1302 Fragaria x ananassa HOM05D008545 ORTHO05D010341 5.1e-125 451.1 223 100.0
FAN10G0919 Fragaria x ananassa HOM05D008545 ORTHO05D010341 1.7e-120 436.0 223 96.9
FAN10G3148 Fragaria x ananassa HOM05D008545 ORTHO05D010341 5.0e-120 434.5 223 96.4
FvH4_7g15870 Fragaria vesca HOM05D008545 ORTHO05D010341 2.1e-118 429.1 223 95.5
FAN03G1297 Fragaria x ananassa HOM05D008545 ORTHO05D010341 1.0e-117 426.8 223 95.1
FAN06G5050 Fragaria x ananassa HOM05D008545 ORTHO05D010341 3.0e-117 425.2 223 94.6
RcHm_v2.0_Chr1g0358691 Rosa chinensis HOM05D008545 ORTHO05D010341 3.2e-103 378.6 223 86.5
FAN06G3211 Fragaria x ananassa HOM05D008545 ORTHO05D010341 2.9e-80 302.4 163 92.6
MD07G1144400 Malus domestica HOM05D008545 ORTHO05D010341 8.3e-59 231.1 230 58.3
Prupe.2G183300 Prunus persica HOM05D008545 ORTHO05D010341 4.7e-54 215.3 215 58.1
Thecc.01G347700 Theobroma cacao HOM05D008545 ORTHO05D010341 6.4e-43 178.3 217 45.6
Duzib138G0500 Durio zibethinus HOM05D008545 ORTHO05D010341 2.8e-38 162.9 217 42.4
Atru.chr5.619 Acer truncatum HOM05D008545 ORTHO05D010341 3.6e-38 162.5 223 45.7
Gohir.D07G144800 Gossypium hirsutum HOM05D008545 ORTHO05D010341 1.4e-34 150.6 226 40.7
Gorai.001G156800 Gossypium raimondii HOM05D008545 ORTHO05D010341 1.4e-34 150.6 226 40.7
Gohir.A07G139700 Gossypium hirsutum HOM05D008545 ORTHO05D010341 3.2e-34 149.4 226 40.3
GSVIVG01027047001 Vitis vinifera HOM05D008545 ORTHO05D010341 7.8e-33 144.8 227 41.9
TAR629G2366 Trochodendron aralioides HOM05D008545 ORTHO05D010341 1.4e-29 134.0 224 39.7
Dinv43892 Davidia involucrata HOM05D008545 ORTHO05D010341 1.2e-28 131.0 213 39.4
Potri.014G094600 Populus trichocarpa HOM05D008545 ORTHO05D010341 2.6e-28 129.8 218 37.6
Eucgr.D02345 Eucalyptus grandis HOM05D008545 ORTHO05D010341 1.3e-27 127.5 217 40.1
Potri.002G167500 Populus trichocarpa HOM05D008545 ORTHO05D010341 1.3e-27 127.5 227 38.3
MD01G1075500 Malus domestica HOM05D008545 ORTHO05D010341 3.0e-24 116.3 110 62.7
CSS0024380 Camellia sinensis var. sinensis HOM05D008545 ORTHO05D010341 8.7e-24 114.8 216 37.5
Manes.01G249300 Manihot esculenta HOM05D008545 ORTHO05D010341 1.9e-23 113.6 216 36.1
Lj9A592T71 Lonicera japonica HOM05D008545 ORTHO05D010341 9.6e-23 111.3 227 35.2
Lj7A504G55 Lonicera japonica HOM05D008545 ORTHO05D010341 9.0e-21 104.8 217 35.0
PGR031G2054 Punica granatum HOM05D008545 ORTHO05D010341 8.4e-19 98.2 229 32.8
CANSAT56G3993 Cannabis sativa HOM05D008545 ORTHO05D010341 6.0e-17 92.0 196 34.2
Sabra14G0069200 Salix brachista HOM05D008545 ORTHO05D010341 1.8e-16 90.5 121 43.8
Peaxi162Scf00403g00718 Petunia axillaris HOM05D008545 ORTHO05D010341 4.3e-15 85.9 175 34.9
DCAR_016077 Daucus carota HOM05D009167 ORTHO05D010341 2.8e-14 83.2 224 33.0
Nitab4.5_0002262g0100 Nicotiana tabacum HOM05D008545 ORTHO05D010341 1.1e-13 81.3 159 37.7
CAN.G310.5 Capsicum annuum HOM05D008545 ORTHO05D010341 9.0e-13 78.2 149 35.6
Hma1.2p1_0384F.1_g141050 Hydrangea macrophylla HOM05D008545 ORTHO05D010341 1.2e-12 77.8 91 47.3
Actinidia20194 Actinidia chinensis HOM05D008545 ORTHO05D010341 6.5e-11 72.0 209 31.1
MBI06_g22406_MAGBIO Magnolia biondii HOM05D004891 ORTHO05D010341 1.2e-09 67.8 162 32.1
PGSC0003DMG400033878 Solanum tuberosum HOM05D008545 ORTHO05D010341 1.6e-09 67.4 167 30.5
Nn1g01793 Nelumbo nucifera HOM05D008545 ORTHO05D010341 2.1e-09 67.0 167 29.9
Solyc05g050240.3 Solanum lycopersicum HOM05D008545 ORTHO05D010341 2.1e-09 67.0 172 29.1
Migut.B01833 Erythranthe guttata HOM05D008545 ORTHO05D010341 1.1e-07 61.2 92 39.1
COL.COLO4_06334 Corchorus olitorius HOM05D002314 ORTHO05D002538 2.5e-07 60.1 52 53.8
MSTRG.17319 Avicennia marina HOM05D008545 ORTHO05D010341 9.6e-07 58.2 107 37.4
SGA_v2.0_scaffold5G02985 Striga asiatica HOM05D008545 ORTHO05D010341 2.1e-06 57.0 90 40.0


User provided reference genes

Program Settings