Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN01G1234 Fragaria x ananassa HOM05D006438 ORTHO05D007998 0.0e+00 1207.2 637 100.0
FAN10G0107 Fragaria x ananassa HOM05D006438 ORTHO05D007998 0.0e+00 1161.0 652 94.5
FAN10G3447 Fragaria x ananassa HOM05D006438 ORTHO05D007998 0.0e+00 1160.2 650 94.6
FvH4_7g16650 Fragaria vesca HOM05D006438 ORTHO05D007998 0.0e+00 1148.7 652 94.0
FAN03G1123 Fragaria x ananassa HOM05D006438 ORTHO05D007998 0.0e+00 1130.2 652 91.9
RcHm_v2.0_Chr1g0359811 Rosa chinensis HOM05D006438 ORTHO05D007998 0.0e+00 1088.2 664 88.7
Prupe.2G189300 Prunus persica HOM05D006438 ORTHO05D007998 6.5e-266 920.6 652 75.5
MD07G1150500 Malus domestica HOM05D006438 ORTHO05D007998 1.6e-251 872.8 651 72.7
MD01G1082100 Malus domestica HOM05D006438 ORTHO05D007998 6.3e-245 850.9 657 70.9
CiPaw.02G041100 Carya illinoinensis HOM05D006438 ORTHO05D007998 6.1e-232 807.7 646 67.6
QL11p022848 Quercus lobata HOM05D006438 ORTHO05D007998 5.2e-231 804.7 652 66.6
Dinv32596 Davidia involucrata HOM05D006438 ORTHO05D007998 1.1e-228 797.0 652 66.4
QL06p050047 Quercus lobata HOM05D006438 ORTHO05D007998 9.2e-228 793.9 652 66.0
Haze_15664 Corylus avellana HOM05D006438 ORTHO05D007998 7.3e-225 784.3 654 65.7
Cfa003796 Carpinus fangiana HOM05D006438 ORTHO05D007998 1.6e-224 783.1 654 66.1
Lj7A500T115 Lonicera japonica HOM05D006438 ORTHO05D007998 9.8e-222 773.9 659 63.9
CANSAT56G2224 Cannabis sativa HOM05D006438 ORTHO05D007998 1.3e-218 763.5 657 64.5
Manes.13G078900 Manihot esculenta HOM05D006438 ORTHO05D007998 1.5e-217 760.0 651 64.4
Actinidia20246 Actinidia chinensis HOM05D006438 ORTHO05D007998 6.2e-216 754.6 654 64.4
TWI59G0942 Tripterygium wilfordii HOM05D006438 ORTHO05D007998 1.1e-215 753.8 659 64.3
Duzib138G1266 Durio zibethinus HOM05D006438 ORTHO05D007998 1.2e-214 750.4 673 62.0
vmacro13165 Vaccinium macrocarpon HOM05D006438 ORTHO05D007998 5.8e-214 748.0 655 64.6
CSS0017951 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 2.4e-212 742.7 652 63.7
Potri.002G171600 Populus trichocarpa HOM05D006438 ORTHO05D007998 1.2e-211 740.3 653 62.6
DCAR_005393 Daucus carota HOM05D006438 ORTHO05D007998 4.6e-211 738.4 650 62.2
CSS0029538 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 6.0e-211 738.0 652 63.3
GSVIVG01027157001 Vitis vinifera HOM05D006438 ORTHO05D007998 6.0e-211 738.0 654 62.8
MSTRG.17348 Avicennia marina HOM05D006438 ORTHO05D007998 7.8e-211 737.6 662 61.5
Gohir.A08G125100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 7.8e-211 737.6 665 62.1
Thecc.01G341800 Theobroma cacao HOM05D006438 ORTHO05D007998 3.0e-210 735.7 672 61.2
Migut.B01878 Erythranthe guttata HOM05D006438 ORTHO05D007998 5.1e-210 734.9 665 61.1
Hund27192 Selenicereus undatus HOM05D006438 ORTHO05D007998 8.6e-210 734.2 674 60.5
Ciclev10019221m.g Citrus clementina HOM05D006438 ORTHO05D007998 5.6e-209 731.5 666 62.2
Sabra14G0072800 Salix brachista HOM05D006438 ORTHO05D007998 3.6e-208 728.8 658 62.0
Glyma.03G257800 Glycine max HOM05D006438 ORTHO05D007998 8.1e-208 727.6 660 62.1
Manes.13G077643 Manihot esculenta HOM05D006438 ORTHO05D007998 2.4e-207 726.1 651 62.4
Glyma.19G256300 Glycine max HOM05D006438 ORTHO05D007998 5.2e-207 724.9 656 62.0
Lj1g0004073 Lotus japonicus HOM05D006438 ORTHO05D007998 5.2e-207 724.9 661 61.7
Gohir.D08G146100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 2.0e-206 723.0 656 61.6
PGSC0003DMG400000230 Solanum tuberosum HOM05D006438 ORTHO05D007998 5.8e-206 721.5 671 60.2
Gorai.004G151600 Gossypium raimondii HOM05D006438 ORTHO05D007998 1.3e-205 720.3 656 61.7
Phvul.006G113600 Phaseolus vulgaris HOM05D006438 ORTHO05D007998 1.3e-205 720.3 655 60.3
Rhsim07G0003900 Rhododendron simsii HOM05D006438 ORTHO05D007998 2.2e-205 719.5 656 63.4
Solyc01g096030.4 Solanum lycopersicum HOM05D006438 ORTHO05D007998 2.2e-205 719.5 671 60.1
Cpa.g.sc96.25 Carica papaya HOM05D006438 ORTHO05D007998 6.4e-205 718.0 656 61.9
Ca_09510_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 6.4e-205 718.0 657 60.3
Ca_30059_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 6.4e-205 718.0 657 60.3
Lalb_Chr18g0044491 Lupinus albus HOM05D006438 ORTHO05D007998 3.2e-204 715.7 659 61.5
Sc23g0002070 Simmondsia chinensis HOM05D006438 ORTHO05D007998 3.2e-204 715.7 675 58.2
Sopen01g039750 Solanum pennellii HOM05D006438 ORTHO05D007998 7.1e-204 714.5 671 59.6
Peaxi162Scf00786g00012 Petunia axillaris HOM05D006438 ORTHO05D007998 3.5e-203 712.2 661 60.1
SalBow3G2635 Salvia bowleyana HOM05D006438 ORTHO05D007998 3.0e-202 709.1 648 59.7
Nn3g18981 Nelumbo nucifera HOM05D006438 ORTHO05D007998 3.9e-202 708.8 650 60.8
EL10Ac1g00261 Beta vulgaris HOM05D006438 ORTHO05D007998 8.7e-202 707.6 673 59.1
SGA_v2.0_scaffold5G03022 Striga asiatica HOM05D006438 ORTHO05D007998 4.3e-201 705.3 661 58.7
CAN.G1415.26 Capsicum annuum HOM05D006438 ORTHO05D007998 7.3e-201 704.5 663 60.0
VMungo0540G1767 Vigna mungo HOM05D006438 ORTHO05D007998 1.1e-199 700.7 655 58.9
PSO170G3726 Papaver somniferum HOM05D006438 ORTHO05D007998 4.4e-198 695.3 653 58.3
AUR62023453 Chenopodium quinoa HOM05D006438 ORTHO05D007998 8.4e-197 691.0 673 58.1
Nitab4.5_0000172g0480 Nicotiana tabacum HOM05D006438 ORTHO05D007998 8.4e-197 691.0 671 58.4
Nitab4.5_0013402g0010 Nicotiana tabacum HOM05D006438 ORTHO05D007998 1.1e-196 690.6 671 58.6
Ah.05g179490 Amaranthus hybridus HOM05D006438 ORTHO05D007998 2.4e-196 689.5 671 58.4
TPR.G4682 Trifolium pratense HOM05D006438 ORTHO05D007998 4.2e-196 688.7 633 60.0
Eucgr.A01924 Eucalyptus grandis HOM05D006438 ORTHO05D007998 1.7e-194 683.3 655 59.5
PSO063G1116 Papaver somniferum HOM05D006438 ORTHO05D007998 1.7e-194 683.3 655 58.3
Nn1g00253 Nelumbo nucifera HOM05D006438 ORTHO05D007998 1.5e-193 680.2 648 59.6
arahy.Tifrunner.gnm1.ann1.TZA1ET Arachis hypogaea HOM05D006438 ORTHO05D007998 1.2e-190 670.6 637 59.5
ClCG06G001260 Citrullus lanatus HOM05D006438 ORTHO05D007998 4.5e-190 668.7 653 57.4
arahy.Tifrunner.gnm1.ann1.QN4XTT Arachis hypogaea HOM05D006438 ORTHO05D007998 5.8e-190 668.3 639 59.3
Psat3g002440 Pisum sativum HOM05D006438 ORTHO05D007998 8.4e-189 664.5 660 57.4
Medtr7g117420 Medicago truncatula HOM05D006438 ORTHO05D007998 1.2e-187 660.6 633 58.6
MELO3C022408.2 Cucumis melo HOM05D006438 ORTHO05D007998 2.7e-187 659.4 658 57.4
COL.COLO4_06280 Corchorus olitorius HOM05D006438 ORTHO05D007998 6.0e-187 658.3 608 60.5
THA.LOC104817364 Tarenaya hassleriana HOM05D006438 ORTHO05D007998 5.1e-186 655.2 684 56.9
ECA236G2598 Erigeron canadensis HOM05D006438 ORTHO05D007998 1.9e-185 653.3 641 57.6
PGR031G2090 Punica granatum HOM05D006438 ORTHO05D007998 5.6e-185 651.7 655 57.3
CsaV3_6G007190 Cucumis sativus L. HOM05D006438 ORTHO05D007998 4.8e-184 648.7 658 57.1
Aqoxy5G04279 Aquilegia oxysepala HOM05D006438 ORTHO05D007998 3.1e-183 646.0 653 55.9
Potri.014G099300 Populus trichocarpa HOM05D006438 ORTHO05D007998 1.0e-181 641.0 580 61.6
AL5G44360 Arabidopsis lyrata HOM05D006438 ORTHO05D007998 2.5e-177 626.3 684 53.9
HanXRQChr04g0120541 Helianthus annuus HOM05D006438 ORTHO05D007998 3.3e-177 625.9 654 55.8
Aa31LG10G15790 Aethionema arabicum HOM05D006438 ORTHO05D007998 2.8e-176 622.9 660 55.9
Thhalv10005821m.g Eutrema salsugineum HOM05D006438 ORTHO05D007998 3.7e-176 622.5 687 52.7
Sed0005284 Sechium edule HOM05D006438 ORTHO05D007998 3.7e-176 622.5 643 55.7
MBI07_g40678_MAGBIO Magnolia biondii HOM05D006438 ORTHO05D007998 1.1e-175 620.9 662 53.2
Sp5g01570 Schrenkiella parvula HOM05D006438 ORTHO05D007998 1.8e-175 620.2 684 52.3
BolC6t37959H Brassica oleracea HOM05D006438 ORTHO05D007998 9.3e-172 607.8 679 52.6
BraA07t30216Z Brassica rapa HOM05D006438 ORTHO05D007998 2.1e-171 606.7 683 52.4
A07p25760 Brassica napus HOM05D006438 ORTHO05D007998 4.6e-171 605.5 683 52.3
AT3G61800 Arabidopsis thaliana HOM05D006438 ORTHO05D007998 1.3e-170 604.0 685 52.1
CARHR172130 Cardamine hirsuta HOM05D006438 ORTHO05D007998 2.2e-168 596.7 690 51.7
Carub.0005s2854 Capsella rubella HOM05D006438 ORTHO05D007998 6.3e-168 595.1 683 51.0
C06p27980 Brassica napus HOM05D006438 ORTHO05D007998 8.2e-168 594.7 679 51.5
AUR62004500 Chenopodium quinoa HOM05D006438 ORTHO05D007998 9.0e-167 591.3 661 53.0
ATR0602G124 Amborella trichopoda HOM05D006438 ORTHO05D007998 1.7e-165 587.0 675 51.3
Lsat_1_v5_gn_7_1020 Lactuca sativa HOM05D006438 ORTHO05D007998 3.8e-165 585.9 658 54.0
HPP92_008818 Vanilla planifolia HOM05D006438 ORTHO05D007998 2.3e-162 576.6 676 50.7
unitig_37.g12626 Utricularia gibba HOM05D006438 ORTHO05D007998 4.3e-161 572.4 618 53.6
Actinidia10144 Actinidia chinensis HOM05D006438 ORTHO05D007998 4.4e-153 545.8 473 62.2
SEGI_11798 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 7.2e-124 448.7 699 41.3
Mapoly0002s0048 Marchantia polymorpha HOM05D006438 ORTHO05D007998 5.2e-122 442.6 678 42.6
BcaC08g45166 Brassica carinata HOM05D006438 ORTHO05D007998 5.7e-121 439.1 561 47.4
Zm00001eb378420 Zea mays HOM05D006438 ORTHO05D007998 2.7e-118 430.3 631 44.8
Dinv35119 Davidia involucrata HOM05D006438 ORTHO05D007998 3.5e-118 429.9 655 44.6
Pp3c3_31410 Physcomitrium patens HOM05D006438 ORTHO05D007998 8.3e-112 408.7 692 37.3
SMO365G0083 Selaginella moellendorffii HOM05D006438 ORTHO05D007998 1.9e-111 407.5 651 39.6
Atru.chr5.676 Acer truncatum HOM05D006438 ORTHO05D007998 2.2e-104 384.0 311 69.8
Cc10_g13840 Coffea canephora HOM05D006438 ORTHO05D007998 5.4e-103 379.4 379 58.3
BcaC08g45168 Brassica carinata HOM05D006438 ORTHO05D007998 5.6e-92 342.8 320 59.7
CDE08G0794 Ceratophyllum demersum HOM05D006438 ORTHO05D007998 2.0e-89 334.3 330 53.9
SHI13317 Sapria himalayana HOM05D006438 ORTHO05D007998 3.4e-89 333.6 363 53.7
Atru.chr5.675 Acer truncatum HOM05D006438 ORTHO05D007998 1.1e-79 302.0 244 66.4
AagrBONN_evm.TU.Sc2ySwM_368.299 Anthoceros agrestis HOM05D006438 ORTHO05D007998 2.4e-66 257.7 614 31.3
BcaC08g45167 Brassica carinata HOM05D006438 ORTHO05D007998 4.1e-58 230.3 254 53.5
C08p42400 Brassica napus HOM05D006438 ORTHO05D007998 6.1e-46 189.9 274 45.6
BraA06t25827Z Brassica rapa HOM05D006438 ORTHO05D007998 1.8e-45 188.3 260 46.5
SEGI_17110 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 1.8e-42 178.3 225 43.6
Sabra02G0141200 Salix brachista HOM05D006438 ORTHO05D007998 1.2e-33 149.1 344 32.6
SEGI_37113 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 1.1e-18 99.4 180 35.0
Zm00001eb167390 Zea mays HOM05D006438 ORTHO05D007998 5.7e-12 77.0 87 49.4
Aa31sc496G10 Aethionema arabicum HOM05D006438 ORTHO05D007998 5.0e-08 63.9 121 38.8
MCO15G002 Micromonas commoda HOM05D006438 ORTHO05D007998 1.9e-07 62.0 222 28.4


User provided reference genes

Program Settings