Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN01G0980 Fragaria x ananassa HOM05D004910 ORTHO05D006864 0.0e+00 4246.0 2238 100.0
FAN03G0816 Fragaria x ananassa HOM05D004910 ORTHO05D006864 0.0e+00 3910.5 2239 93.4
FAN06G0636 Fragaria x ananassa HOM05D004910 ORTHO05D006864 0.0e+00 3855.4 2238 92.4
FAN10G3403 Fragaria x ananassa HOM05D004910 ORTHO05D006864 0.0e+00 3855.1 2238 92.1
FvH4_7g07740 Fragaria vesca HOM05D004910 ORTHO05D006864 0.0e+00 3848.5 2238 92.4
RcHm_v2.0_Chr1g0342311 Rosa chinensis HOM05D004910 ORTHO05D006864 0.0e+00 3625.9 2249 86.7
Prupe.2G105000 Prunus persica HOM05D004910 ORTHO05D006864 0.0e+00 3206.8 2258 77.5
MD07G1080500 Malus domestica HOM05D004910 ORTHO05D006864 0.0e+00 3196.0 2258 77.2
Cfa003693 Carpinus fangiana HOM05D004910 ORTHO05D006864 0.0e+00 2800.0 2262 67.9
CANSAT25G1237 Cannabis sativa HOM05D004910 ORTHO05D006864 0.0e+00 2657.5 2257 65.4
Potri.013G071800 Populus trichocarpa HOM05D004910 ORTHO05D006864 0.0e+00 2639.4 2270 64.3
CiPaw.02G046700 Carya illinoinensis HOM05D004910 ORTHO05D006864 0.0e+00 2626.7 2268 64.3
Thecc.05G234000 Theobroma cacao HOM05D004910 ORTHO05D006864 0.0e+00 2625.5 2269 64.0
Manes.08G157000 Manihot esculenta HOM05D004910 ORTHO05D006864 0.0e+00 2537.3 2272 62.4
TAR629G2465 Trochodendron aralioides HOM05D004910 ORTHO05D006864 0.0e+00 2536.9 2301 62.4
Duzib177G0285 Durio zibethinus HOM05D004910 ORTHO05D006864 0.0e+00 2533.1 2271 62.1
Dinv43524 Davidia involucrata HOM05D004910 ORTHO05D006864 0.0e+00 2489.1 2270 63.3
TWI34G0933 Tripterygium wilfordii HOM05D004910 ORTHO05D006864 0.0e+00 2477.6 2280 60.6
Gorai.007G249800 Gossypium raimondii HOM05D004910 ORTHO05D006864 0.0e+00 2467.6 2279 61.2
Glyma.03G099800 Glycine max HOM05D004910 ORTHO05D006864 0.0e+00 2447.5 2268 59.6
GSVIVG01019298001 Vitis vinifera HOM05D004910 ORTHO05D006864 0.0e+00 2427.5 2293 59.5
Ca_25886_v3 Cicer arietinum L. HOM05D004910 ORTHO05D006864 0.0e+00 2412.9 2264 60.5
Lj3g0022995 Lotus japonicus HOM05D004910 ORTHO05D006864 0.0e+00 2410.6 2270 60.0
Phvul.010G039700 Phaseolus vulgaris HOM05D004910 ORTHO05D006864 0.0e+00 2408.3 2264 58.7
Glyma.07G122900 Glycine max HOM05D004910 ORTHO05D006864 0.0e+00 2402.5 2271 59.2
TPR.G17367 Trifolium pratense HOM05D004910 ORTHO05D006864 0.0e+00 2400.5 2269 59.4
Medtr8g009780 Medicago truncatula HOM05D004910 ORTHO05D006864 0.0e+00 2394.8 2269 59.9
Lalb_Chr07g0194851 Lupinus albus HOM05D004910 ORTHO05D006864 0.0e+00 2379.0 2270 59.9
Haze_15792 Corylus avellana HOM05D004910 ORTHO05D006864 0.0e+00 2376.3 2025 65.0
Ciclev10030475m.g Citrus clementina HOM05D004910 ORTHO05D006864 0.0e+00 2353.9 2272 58.5
MELO3C006215.2 Cucumis melo HOM05D004910 ORTHO05D006864 0.0e+00 2313.1 2268 57.8
CsaV3_3G009930 Cucumis sativus L. HOM05D004910 ORTHO05D006864 0.0e+00 2308.5 2264 58.3
Sed0008127 Sechium edule HOM05D004910 ORTHO05D006864 0.0e+00 2287.3 2268 57.7
Eucgr.D01069 Eucalyptus grandis HOM05D004910 ORTHO05D006864 0.0e+00 2285.8 2269 57.6
Rhsim07G0047300 Rhododendron simsii HOM05D004910 ORTHO05D006864 0.0e+00 2226.8 2049 59.5
PSO782G5450 Papaver somniferum HOM05D004910 ORTHO05D006864 0.0e+00 2220.7 2289 56.4
Nitab4.5_0006461g0010 Nicotiana tabacum HOM05D004910 ORTHO05D006864 0.0e+00 2198.7 2265 55.5
COL.COLO4_08664 Corchorus olitorius HOM05D004910 ORTHO05D006864 0.0e+00 2197.9 2261 56.7
CAN.G992.20 Capsicum annuum HOM05D004910 ORTHO05D006864 0.0e+00 2187.1 2265 55.4
Nitab4.5_0000792g0070 Nicotiana tabacum HOM05D004910 ORTHO05D006864 0.0e+00 2186.0 2272 55.4
Cc08_g05600 Coffea canephora HOM05D004910 ORTHO05D006864 0.0e+00 2185.6 2274 54.7
MBI04_g30775_MAGBIO Magnolia biondii HOM05D004910 ORTHO05D006864 0.0e+00 2184.5 2340 55.2
Aqoxy3G02002 Aquilegia oxysepala HOM05D004910 ORTHO05D006864 0.0e+00 2182.9 2303 55.4
arahy.Tifrunner.gnm1.ann1.7UUD9R Arachis hypogaea HOM05D004910 ORTHO05D006864 0.0e+00 2179.1 2190 56.6
SalBow4G1969 Salvia bowleyana HOM05D004910 ORTHO05D006864 0.0e+00 2155.6 2279 53.6
DCAR_029567 Daucus carota HOM05D004910 ORTHO05D006864 0.0e+00 2145.2 2292 54.1
Sopen01g032990 Solanum pennellii HOM05D004910 ORTHO05D006864 0.0e+00 2139.4 2266 55.5
THA.LOC104805731 Tarenaya hassleriana HOM05D004910 ORTHO05D006864 0.0e+00 2123.6 2268 54.9
ClCG05G002500 Citrullus lanatus HOM05D004910 ORTHO05D006864 0.0e+00 2109.0 2192 55.6
VMungo0331G1962 Vigna mungo HOM05D004910 ORTHO05D006864 0.0e+00 2091.6 2145 55.8
Lsat_1_v5_gn_4_42261 Lactuca sativa HOM05D004910 ORTHO05D006864 0.0e+00 2065.8 2248 53.1
vmacro13594 Vaccinium macrocarpon HOM05D004910 ORTHO05D006864 0.0e+00 2057.0 2229 52.8
ECA234G3354 Erigeron canadensis HOM05D004910 ORTHO05D006864 0.0e+00 2055.0 2233 54.7
QL04p053216 Quercus lobata HOM05D004910 ORTHO05D006864 0.0e+00 2030.8 1673 66.0
Gohir.D11G236600 Gossypium hirsutum HOM05D004910 ORTHO05D006864 0.0e+00 2025.0 1958 59.0
EL10Ac1g00665 Beta vulgaris HOM05D004910 ORTHO05D006864 0.0e+00 2012.3 2309 51.3
Gohir.A11G225700 Gossypium hirsutum HOM05D004910 ORTHO05D006864 0.0e+00 1999.9 1960 58.8
Migut.N01670 Erythranthe guttata HOM05D004910 ORTHO05D006864 0.0e+00 1980.3 2263 51.0
HanXRQChr15g0492621 Helianthus annuus HOM05D004910 ORTHO05D006864 0.0e+00 1947.9 2239 51.3
CSS0017393 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 0.0e+00 1946.4 1979 56.4
Aa31LG9G17970 Aethionema arabicum HOM05D004910 ORTHO05D006864 0.0e+00 1890.9 2306 49.8
Lj9A617T56 Lonicera japonica HOM05D004910 ORTHO05D006864 0.0e+00 1880.5 1911 55.7
ATR0829G021 Amborella trichopoda HOM05D004910 ORTHO05D006864 0.0e+00 1865.5 2289 50.9
AL7G44770 Arabidopsis lyrata HOM05D004910 ORTHO05D006864 0.0e+00 1836.2 2257 50.2
Peaxi162Scf00907g00121 Petunia axillaris HOM05D004910 ORTHO05D006864 0.0e+00 1833.5 2061 53.2
Hund26917 Selenicereus undatus HOM05D004910 ORTHO05D006864 0.0e+00 1825.1 2183 50.0
Solyc01g081430.4 Solanum lycopersicum HOM05D004910 ORTHO05D006864 0.0e+00 1825.1 2026 53.6
Ah.05g177140 Amaranthus hybridus HOM05D004910 ORTHO05D006864 0.0e+00 1790.8 2231 48.4
SGA_v2.0_scaffold4G02226 Striga asiatica HOM05D004910 ORTHO05D006864 0.0e+00 1790.0 2119 51.3
PGR083G1400 Punica granatum HOM05D004910 ORTHO05D006864 0.0e+00 1692.9 1606 58.0
Oeu002050.1 Olea europaea HOM05D004910 ORTHO05D006864 0.0e+00 1607.8 1666 56.5
Zm00001eb025470 Zea mays HOM05D004910 ORTHO05D006864 0.0e+00 1598.2 2075 45.3
AUR62038026 Chenopodium quinoa HOM05D004910 ORTHO05D006864 0.0e+00 1511.9 1832 49.5
CARHR216720 Cardamine hirsuta HOM05D004910 ORTHO05D006864 0.0e+00 1454.1 1689 52.2
Sc26g0002020 Simmondsia chinensis HOM05D004910 ORTHO05D006864 0.0e+00 1435.2 1687 51.5
arahy.Tifrunner.gnm1.ann1.X9S6DI Arachis hypogaea HOM05D004910 ORTHO05D006864 0.0e+00 1434.1 1557 54.5
CDE12G0362 Ceratophyllum demersum HOM05D004910 ORTHO05D006864 0.0e+00 1427.5 1893 44.8
AUR62014509 Chenopodium quinoa HOM05D004910 ORTHO05D006864 0.0e+00 1405.2 1692 50.4
Atru.chr2.1651 Acer truncatum HOM05D004910 ORTHO05D006864 0.0e+00 1397.9 1208 62.1
Mapoly0032s0018 Marchantia polymorpha HOM05D004910 ORTHO05D006864 0.0e+00 1317.0 2402 39.8
Pp3c7_26820 Physcomitrium patens HOM05D004910 ORTHO05D006864 0.0e+00 1192.9 2361 37.8
AagrBONN_evm.TU.Sc2ySwM_362.1947 Anthoceros agrestis HOM05D004910 ORTHO05D006864 0.0e+00 1187.9 2043 38.2
Psat4g216280 Pisum sativum HOM05D004910 ORTHO05D006864 0.0e+00 1159.4 1298 51.7
Atru.chr2.1650 Acer truncatum HOM05D004910 ORTHO05D006864 0.0e+00 1144.8 1019 64.5
Cpa.g.sc73.58 Carica papaya HOM05D004910 ORTHO05D006864 0.0e+00 1092.8 1023 58.9
arahy.Tifrunner.gnm1.ann1.L1X5S4 Arachis hypogaea HOM05D004910 ORTHO05D006864 0.0e+00 1082.8 1141 55.0
PSO063G6831 Papaver somniferum HOM05D004910 ORTHO05D006864 5.4e-299 1032.3 1125 55.3
PSO063G2935 Papaver somniferum HOM05D004910 ORTHO05D006864 6.2e-295 1018.8 1056 54.8
SEGI_03249 Sequoiadendron giganteum HOM05D004910 ORTHO05D006864 9.0e-262 908.7 1377 41.0
Os04g0218600 Oryza sativa ssp. japonica HOM05D004910 ORTHO05D006864 7.4e-248 862.4 1064 48.0
Actinidia21201 Actinidia chinensis HOM05D004910 ORTHO05D006864 5.9e-221 773.1 875 50.9
QL04p053202 Quercus lobata HOM05D004910 ORTHO05D006864 2.2e-220 771.2 604 68.2
CBR_g49462 Chara braunii HOM05D004910 ORTHO05D006864 3.2e-203 714.1 2830 28.0
Psat4g215960 Pisum sativum HOM05D004910 ORTHO05D006864 2.5e-195 688.0 601 61.4
SMO347G0286 Selaginella moellendorffii HOM05D004910 ORTHO05D006864 3.5e-189 667.5 1525 31.8
unitig_578.g16705 Utricularia gibba HOM05D004910 ORTHO05D006864 4.6e-189 667.2 726 51.2
Hma1.2p1_0353F.1_g133240 Hydrangea macrophylla HOM05D004910 ORTHO05D006864 4.8e-146 524.2 510 58.2
arahy.Tifrunner.gnm1.ann1.2JI1W5 Arachis hypogaea HOM05D004910 ORTHO05D006864 9.0e-145 520.0 399 66.7
Prupe.2G100700 Prunus persica HOM05D004910 ORTHO05D006864 1.1e-139 503.1 379 71.5
PGR083G0666 Punica granatum HOM05D004910 ORTHO05D006864 3.7e-122 444.9 565 53.1
AUR62038025 Chenopodium quinoa HOM05D004910 ORTHO05D006864 1.8e-113 416.0 426 54.7
AUR62014510 Chenopodium quinoa HOM05D004910 ORTHO05D006864 4.1e-113 414.8 427 55.5
CSS0010640 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 4.7e-109 401.4 342 64.6
Cpa.g.sc73.62 Carica papaya HOM05D004910 ORTHO05D006864 1.1e-102 380.2 212 87.3
Solyc01g081420.3 Solanum lycopersicum HOM05D004910 ORTHO05D006864 3.7e-98 365.2 216 81.5
Peaxi162Scf00907g00123 Petunia axillaris HOM05D004910 ORTHO05D006864 1.5e-94 353.2 230 76.5
Actinidia21200 Actinidia chinensis HOM05D004910 ORTHO05D006864 1.6e-93 349.7 337 58.5
Haze_15794 Corylus avellana HOM05D004910 ORTHO05D006864 1.2e-88 333.6 183 88.0
Psat4g216320 Pisum sativum HOM05D004910 ORTHO05D006864 4.3e-78 298.5 304 72.4
Cpa.g.sc73.57 Carica papaya HOM05D004910 ORTHO05D006864 1.2e-77 297.0 344 57.8
Actinidia31737 Actinidia chinensis HOM05D004910 ORTHO05D006864 2.3e-76 292.7 651 33.6
CDE12G0963 Ceratophyllum demersum HOM05D004910 ORTHO05D006864 1.7e-74 286.6 376 57.4
VMungo0331G1288 Vigna mungo HOM05D004910 ORTHO05D010195 3.1e-60 239.2 128 88.3
FvH4_1g21580 Fragaria vesca HOM05D004910 ORTHO05D045425 6.4e-58 231.5 135 91.1
Cpa.g.sc73.59 Carica papaya HOM05D004910 ORTHO05D006864 4.6e-56 225.3 355 42.3
Gohir.A11G225602 Gossypium hirsutum HOM05D004910 ORTHO05D006864 7.6e-51 208.0 175 64.0
Rhsim07G0047400 Rhododendron simsii HOM05D004910 ORTHO05D006864 2.4e-49 203.0 161 70.8
vmacro13596 Vaccinium macrocarpon HOM05D004910 ORTHO05D006864 1.2e-48 200.7 161 69.6
AagrBONN_evm.TU.Sc2ySwM_117.2552 Anthoceros agrestis HOM05D004910 ORTHO05D006864 1.0e-47 197.6 278 42.8
CSS0011325 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 1.2e-43 184.1 133 65.4
PGSC0003DMG400031109 Solanum tuberosum HOM05D004910 ORTHO05D006864 1.7e-42 180.3 157 68.8
Lj9A617T57 Lonicera japonica HOM05D004910 ORTHO05D006864 2.4e-41 176.4 144 70.1
CSS0010022 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 2.5e-38 166.4 149 62.4
CSS0036242 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 3.3e-38 166.0 149 62.4
Os10g0581000 Oryza sativa ssp. japonica HOM05D004910 ORTHO05D006864 5.3e-36 158.7 332 47.6
CSS0002002 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 2.9e-34 152.9 73 93.2
CSS0008041 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 2.9e-34 152.9 73 93.2
Psat6g100000 Pisum sativum HOM05D004910 ORTHO05D030483 5.1e-31 142.1 227 42.7
RcHm_v2.0_Chr4g0408121 Rosa chinensis HOM05D004910 ORTHO05D006864 1.1e-30 141.0 85 84.7
Os04g0218701 Oryza sativa ssp. japonica HOM05D004910 ORTHO05D006864 2.4e-28 133.3 373 45.0
Actinidia21203 Actinidia chinensis HOM05D004910 ORTHO05D006864 3.1e-28 132.9 64 92.2
SEGI_03241 Sequoiadendron giganteum HOM05D004910 ORTHO05D006864 4.2e-25 122.5 99 61.6
FAN23G3082 Fragaria x ananassa HOM05D004910 ORTHO05D045425 1.0e-23 117.9 65 92.3
RcHm_v2.0_Chr4g0407941 Rosa chinensis HOM05D004910 ORTHO05D019205 1.8e-23 117.1 65 87.7
SEGI_03420 Sequoiadendron giganteum HOM05D004910 ORTHO05D006864 1.1e-22 114.4 177 45.2
Psat0s999g0120 Pisum sativum HOM05D004910 ORTHO05D030483 2.2e-18 100.1 147 44.2
CSS0032650 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 1.4e-17 97.4 57 80.7
ClCG00G006380 Citrullus lanatus HOM05D004910 ORTHO05D006864 2.7e-16 93.2 53 83.0
Dinv00622 Davidia involucrata HOM05D004910 ORTHO05D006864 3.9e-15 89.4 79 60.8
Nitab4.5_0011076g0010 Nicotiana tabacum HOM05D004910 ORTHO05D006864 5.1e-15 89.0 53 81.1
FAN03G1104 Fragaria x ananassa HOM05D004910 ORTHO05D019205 7.4e-14 85.1 53 79.2
Actinidia21202 Actinidia chinensis HOM05D004910 ORTHO05D030909 4.2e-09 69.3 49 77.6
Gohir.D06G038650 Gossypium hirsutum HOM05D004910 ORTHO05D030909 9.4e-09 68.2 55 60.0
Phvul.010G039400 Phaseolus vulgaris HOM05D004910 ORTHO05D006864 7.9e-08 65.1 55 63.6
Haze_15793 Corylus avellana HOM05D004910 ORTHO05D006864 5.1e-07 62.4 41 68.3
Gohir.D06G038000 Gossypium hirsutum HOM05D004910 ORTHO05D030909 2.0e-06 60.5 50 60.0
vmacro13595 Vaccinium macrocarpon HOM05D004910 ORTHO05D006864 2.5e-06 60.1 42 76.2


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