Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN01G0969 Fragaria x ananassa HOM05D001491 ORTHO05D001443 2.8e-48 194.9 93 100.0
FAN10G0399 Fragaria x ananassa HOM05D001491 ORTHO05D001443 1.6e-11 72.8 37 91.9
QL04p040420 Quercus lobata HOM05D001491 ORTHO05D001443 1.0e-10 70.1 78 48.7
Cfa011203 Carpinus fangiana HOM05D001491 ORTHO05D001443 2.3e-10 68.9 78 48.7
RcHm_v2.0_Chr1g0361871 Rosa chinensis HOM05D001491 ORTHO05D001443 3.0e-10 68.6 35 88.6
QL04p040428 Quercus lobata HOM05D001491 ORTHO05D000014 5.1e-10 67.8 78 48.7
Haze_02643 Corylus avellana HOM05D001491 ORTHO05D001443 1.5e-09 66.2 78 47.4
Lalb_Chr02g0151251 Lupinus albus HOM05D001491 ORTHO05D001443 1.9e-09 65.9 80 46.2
GSVIVG01034674001 Vitis vinifera HOM05D001491 ORTHO05D001443 5.6e-09 64.3 35 80.0
CSS0036276 Camellia sinensis var. sinensis HOM05D001491 ORTHO05D001443 7.3e-09 63.9 38 76.3
Carub.0007s1670 Capsella rubella HOM05D001491 ORTHO05D001443 7.3e-09 63.9 35 77.1
PGSC0003DMG400027354 Solanum tuberosum HOM05D001491 ORTHO05D001443 7.3e-09 63.9 78 43.6
Thecc.10G093800 Theobroma cacao HOM05D001491 ORTHO05D001443 7.3e-09 63.9 35 80.0
AL7G28870 Arabidopsis lyrata HOM05D001491 ORTHO05D001443 1.3e-08 63.2 35 74.3
AT4G24340 Arabidopsis thaliana HOM05D001491 ORTHO05D001443 1.3e-08 63.2 35 74.3
BcaC09g50875 Brassica carinata HOM05D001491 ORTHO05D001443 1.3e-08 63.2 35 74.3
A01p15730 Brassica napus HOM05D001491 ORTHO05D001443 1.3e-08 63.2 35 74.3
C01p19680 Brassica napus HOM05D001491 ORTHO05D001443 1.3e-08 63.2 35 74.3
BolC1t01895H Brassica oleracea HOM05D001491 ORTHO05D001443 1.3e-08 63.2 35 74.3
BraA01t01509Z Brassica rapa HOM05D001491 ORTHO05D001443 1.3e-08 63.2 35 74.3
CSS0025330 Camellia sinensis var. sinensis HOM05D001491 ORTHO05D001443 1.3e-08 63.2 35 80.0
Cc02_g10400 Coffea canephora HOM05D001491 ORTHO05D001443 1.3e-08 63.2 78 46.2
Dinv31278 Davidia involucrata HOM05D001491 ORTHO05D004473 1.3e-08 63.2 35 82.9
Thhalv10025575m.g Eutrema salsugineum HOM05D001491 ORTHO05D001443 1.3e-08 63.2 35 74.3
CARHR231770 Cardamine hirsuta HOM05D001491 ORTHO05D001443 2.1e-08 62.4 35 77.1
COL.COLO4_07609 Corchorus olitorius HOM05D001491 ORTHO05D004473 2.1e-08 62.4 35 80.0
ATR0048G012 Amborella trichopoda HOM05D001491 ORTHO05D001443 2.8e-08 62.0 35 80.0
arahy.Tifrunner.gnm1.ann1.8Y74W7 Arachis hypogaea HOM05D001491 ORTHO05D001443 2.8e-08 62.0 35 77.1
arahy.Tifrunner.gnm1.ann1.AZ5764 Arachis hypogaea HOM05D001491 ORTHO05D001443 2.8e-08 62.0 35 77.1
Sp7g22340 Schrenkiella parvula HOM05D001491 ORTHO05D001443 2.8e-08 62.0 35 74.3
Hma1.2p1_1625F.1_g294290 Hydrangea macrophylla HOM05D001491 ORTHO05D001443 4.8e-08 61.2 35 80.0
Potri.008G028500 Populus trichocarpa HOM05D001491 ORTHO05D001443 4.8e-08 61.2 35 77.1
Migut.F01665 Erythranthe guttata HOM05D001491 ORTHO05D001443 6.2e-08 60.8 36 72.2
Cpa.g.sc128.63 Carica papaya HOM05D001491 ORTHO05D001443 8.1e-08 60.5 35 77.1
Atru.chr12.933 Acer truncatum HOM05D001491 ORTHO05D001443 1.1e-07 60.1 35 80.0
AT4G24350 Arabidopsis thaliana HOM05D001491 ORTHO05D001443 1.1e-07 60.1 35 74.3
Potri.008G028700 Populus trichocarpa HOM05D001491 ORTHO05D001443 1.1e-07 60.1 78 42.3
Rhsim09G0144600 Rhododendron simsii HOM05D001491 ORTHO05D001443 1.1e-07 60.1 78 42.3
Solyc11g007730.2 Solanum lycopersicum HOM05D001491 ORTHO05D001443 1.1e-07 60.1 35 74.3
Sopen11g003590 Solanum pennellii HOM05D001491 ORTHO05D001443 1.1e-07 60.1 35 74.3
AL7G28860 Arabidopsis lyrata HOM05D001491 ORTHO05D001443 1.4e-07 59.7 35 71.4
A01p15740 Brassica napus HOM05D001491 ORTHO05D001443 1.4e-07 59.7 35 74.3
BraA01t01510Z Brassica rapa HOM05D001491 ORTHO05D001443 1.4e-07 59.7 35 74.3
Actinidia38898 Actinidia chinensis HOM05D001491 ORTHO05D001443 1.8e-07 59.3 35 74.3
BcaC09g50874 Brassica carinata HOM05D001491 ORTHO05D001443 1.8e-07 59.3 35 74.3
Carub.0007s1669 Capsella rubella HOM05D001491 ORTHO05D001443 1.8e-07 59.3 35 68.6
Potri.008G028600 Populus trichocarpa HOM05D001491 ORTHO05D001443 1.8e-07 59.3 38 71.1
TWI63G0538 Tripterygium wilfordii HOM05D001491 ORTHO05D001443 1.8e-07 59.3 35 74.3
CAN.G135.52 Capsicum annuum HOM05D001491 ORTHO05D001443 2.4e-07 58.9 35 71.4
Thecc.10G093900 Theobroma cacao HOM05D001491 ORTHO05D001443 2.4e-07 58.9 35 68.6
Cc00_g11320 Coffea canephora HOM05D001491 ORTHO05D001443 4.0e-07 58.2 35 77.1
THA.LOC104799817 Tarenaya hassleriana HOM05D001491 ORTHO05D001443 6.9e-07 57.4 35 65.7
Aa31LG4G9480 Aethionema arabicum HOM05D001491 ORTHO05D001443 1.2e-06 56.6 35 65.7
C01p19690 Brassica napus HOM05D001491 ORTHO05D001443 1.2e-06 56.6 35 71.4
BolC1t01896H Brassica oleracea HOM05D001491 ORTHO05D001443 1.2e-06 56.6 35 71.4
Nitab4.5_0003408g0140 Nicotiana tabacum HOM05D001491 ORTHO05D001443 1.5e-06 56.2 35 68.6
CANSAT56G0589 Cannabis sativa HOM05D001491 ORTHO05D001443 2.0e-06 55.8 78 37.2
Cc00_g11290 Coffea canephora HOM05D001491 ORTHO05D001443 2.0e-06 55.8 35 74.3
Cc02_g10390 Coffea canephora HOM05D001491 ORTHO05D001443 2.0e-06 55.8 35 74.3
Cc02_g10370 Coffea canephora HOM05D001491 ORTHO05D001443 3.4e-06 55.1 35 74.3


User provided reference genes

Program Settings