Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN01G0942 Fragaria x ananassa HOM05D006822 ORTHO05D008884 0.0e+00 1179.9 673 100.0
FAN06G2864 Fragaria x ananassa HOM05D006822 ORTHO05D008884 5.8e-289 997.3 696 86.6
FvH4_7g12110 Fragaria vesca HOM05D006822 ORTHO05D008884 4.1e-287 991.1 696 86.2
RcHm_v2.0_Chr1g0350861 Rosa chinensis HOM05D006822 ORTHO05D008884 6.7e-253 877.5 658 79.5
FAN03G3111 Fragaria x ananassa HOM05D006822 ORTHO05D008884 2.7e-222 775.8 592 77.7
MD02G1201200 Malus domestica HOM05D006822 ORTHO05D008884 2.8e-203 712.6 641 66.8
Prupe.2G147600 Prunus persica HOM05D006822 ORTHO05D008884 4.7e-190 668.7 518 72.2
CiPaw.01G260400 Carya illinoinensis HOM05D006822 ORTHO05D008884 3.6e-182 642.5 669 58.1
Haze_16833 Corylus avellana HOM05D006822 ORTHO05D008884 3.7e-179 632.5 665 58.0
Thecc.01G374100 Theobroma cacao HOM05D006822 ORTHO05D008884 6.2e-174 615.1 661 58.4
Cfa001701 Carpinus fangiana HOM05D006822 ORTHO05D008884 1.1e-173 614.4 661 56.3
Manes.01G264800 Manihot esculenta HOM05D006822 ORTHO05D008884 7.1e-170 601.7 656 57.0
Ciclev10019178m.g Citrus clementina HOM05D006822 ORTHO05D008884 2.7e-169 599.7 656 57.2
GSVIVG01027532001 Vitis vinifera HOM05D006822 ORTHO05D008884 8.6e-168 594.7 642 56.9
Cpa.g.sc18.138 Carica papaya HOM05D006822 ORTHO05D008884 1.9e-167 593.6 647 57.5
Atru.chr5.328 Acer truncatum HOM05D006822 ORTHO05D008884 1.6e-166 590.5 643 55.5
QL08p051944 Quercus lobata HOM05D006822 ORTHO05D008884 3.6e-166 589.3 666 58.9
Dinv32391 Davidia involucrata HOM05D004001 ORTHO05D004559 1.8e-165 587.0 684 55.3
Duzib133G0703 Durio zibethinus HOM05D006822 ORTHO05D008884 2.4e-165 586.6 662 58.5
ClCG05G002100 Citrullus lanatus HOM05D006822 ORTHO05D008884 6.8e-165 585.1 661 56.0
Rhsim07G0025500 Rhododendron simsii HOM05D006822 ORTHO05D008884 6.4e-163 578.6 646 54.8
FAN10G0810 Fragaria x ananassa HOM05D006822 ORTHO05D008884 3.2e-162 576.2 659 60.7
Potri.002G149800 Populus trichocarpa HOM05D006822 ORTHO05D008884 3.2e-162 576.2 657 55.9
vmacro13383 Vaccinium macrocarpon HOM05D006822 ORTHO05D008884 4.2e-162 575.9 648 54.5
VMungo1383G2566 Vigna mungo HOM05D006822 ORTHO05D008884 4.3e-159 565.8 642 52.5
Glyma.09G267800 Glycine max HOM05D006822 ORTHO05D008884 5.6e-159 565.5 654 51.5
MELO3C006175.2 Cucumis melo HOM05D006822 ORTHO05D008884 7.3e-159 565.1 666 56.0
CsaV3_3G009540 Cucumis sativus L. HOM05D006822 ORTHO05D008884 1.3e-158 564.3 661 57.5
CANSAT56G1004 Cannabis sativa HOM05D006822 ORTHO05D008884 3.6e-158 562.8 661 57.5
Gohir.A08G031700 Gossypium hirsutum HOM05D006822 ORTHO05D008884 4.8e-158 562.4 530 60.6
Ca_07832_v3 Cicer arietinum L. HOM05D006822 ORTHO05D008884 8.1e-158 561.6 638 56.0
Phvul.008G075100 Phaseolus vulgaris HOM05D006822 ORTHO05D008884 5.3e-157 558.9 643 51.8
Glyma.18G222100 Glycine max HOM05D006822 ORTHO05D008884 9.0e-157 558.1 654 51.1
Sabra02G0118500 Salix brachista HOM05D006822 ORTHO05D008884 1.3e-155 554.3 657 55.9
Gorai.004G041400 Gossypium raimondii HOM05D006822 ORTHO05D008884 3.8e-155 552.7 527 60.0
TAR375G1023 Trochodendron aralioides HOM05D006822 ORTHO05D008884 4.9e-155 552.4 666 52.9
Sed0020963 Sechium edule HOM05D006822 ORTHO05D008884 8.4e-155 551.6 638 57.8
Gohir.D08G042800 Gossypium hirsutum HOM05D006822 ORTHO05D008884 1.4e-154 550.8 529 60.1
Hma1.2p1_0053F.1_g030830 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 4.6e-153 545.8 654 50.5
Nitab4.5_0004320g0040 Nicotiana tabacum HOM05D006822 ORTHO05D008884 4.6e-153 545.8 646 55.3
arahy.Tifrunner.gnm1.ann1.485MU0 Arachis hypogaea HOM05D006822 ORTHO05D008884 3.0e-152 543.1 653 51.9
arahy.Tifrunner.gnm1.ann1.K16L32 Arachis hypogaea HOM05D006822 ORTHO05D008884 6.6e-152 542.0 653 54.5
CSS0016394 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 6.6e-152 542.0 512 60.9
Lj1g0013249 Lotus japonicus HOM05D006822 ORTHO05D008884 1.1e-151 541.2 655 52.1
Lalb_Chr01g0021331 Lupinus albus HOM05D006822 ORTHO05D008884 1.1e-151 541.2 665 50.2
COL.COLO4_12575 Corchorus olitorius HOM05D006822 ORTHO05D008884 7.3e-151 538.5 635 53.4
CAN.G170.5 Capsicum annuum HOM05D006822 ORTHO05D008884 6.2e-150 535.4 651 56.8
PGR031G1001 Punica granatum HOM05D006822 ORTHO05D008884 8.1e-150 535.0 521 59.3
TWI14G1233 Tripterygium wilfordii HOM05D006822 ORTHO05D008884 1.4e-149 534.3 659 55.7
Lj7A526T89 Lonicera japonica HOM05D006822 ORTHO05D008884 2.4e-149 533.5 664 53.5
Oeu003493.1 Olea europaea HOM05D006822 ORTHO05D008884 6.9e-149 531.9 662 53.3
Cc02_g36520 Coffea canephora HOM05D006822 ORTHO05D008884 2.2e-147 526.9 547 56.5
PSO478G2587 Papaver somniferum HOM05D006822 ORTHO05D008884 6.4e-147 525.4 664 49.2
HanXRQChr04g0122211 Helianthus annuus HOM05D006822 ORTHO05D008884 7.1e-146 521.9 643 55.8
Hma1.2p1_0053F.1_g030820 Hydrangea macrophylla HOM05D006822 ORTHO05D008884 7.1e-146 521.9 526 56.3
Aqoxy7G00564 Aquilegia oxysepala HOM05D006822 ORTHO05D008884 1.2e-145 521.2 646 50.9
PGSC0003DMG401012750 Solanum tuberosum HOM05D006822 ORTHO05D008884 6.0e-145 518.8 669 54.0
Peaxi162Scf00021g01312 Petunia axillaris HOM05D006822 ORTHO05D008884 1.0e-144 518.1 718 47.9
Eucgr.D02443 Eucalyptus grandis HOM05D006822 ORTHO05D008884 3.9e-144 516.2 656 52.7
TPR.G26925 Trifolium pratense HOM05D006822 ORTHO05D008884 8.7e-144 515.0 637 55.6
Nitab4.5_0013912g0010 Nicotiana tabacum HOM05D006822 ORTHO05D008884 1.5e-143 514.2 670 53.1
Medtr7g075170 Medicago truncatula HOM05D006822 ORTHO05D008884 1.9e-143 513.8 623 55.4
Sc23g0003500 Simmondsia chinensis HOM05D006822 ORTHO05D008884 3.3e-143 513.1 691 49.3
Migut.B01651 Erythranthe guttata HOM05D006822 ORTHO05D008884 4.3e-143 512.7 657 51.9
Psat3g115280 Pisum sativum HOM05D006822 ORTHO05D008884 9.6e-143 511.5 636 56.0
Solyc01g091510.4 Solanum lycopersicum HOM05D006822 ORTHO05D008884 1.3e-142 511.1 652 53.8
Sopen01g037280 Solanum pennellii HOM05D006822 ORTHO05D008884 6.2e-142 508.8 652 53.5
AUR62013615 Chenopodium quinoa HOM05D006822 ORTHO05D008884 1.8e-141 507.3 632 51.1
Lsat_1_v5_gn_7_7481 Lactuca sativa HOM05D006822 ORTHO05D008884 2.4e-141 506.9 626 53.8
Ah.05g175170 Amaranthus hybridus HOM05D006822 ORTHO05D008884 2.9e-139 500.0 674 50.4
EL10Ac1g00937 Beta vulgaris HOM05D006822 ORTHO05D008884 1.1e-138 498.0 661 50.8
AUR62004233 Chenopodium quinoa HOM05D006822 ORTHO05D008884 3.2e-138 496.5 625 50.6
Hund27354 Selenicereus undatus HOM05D006822 ORTHO05D008884 4.2e-138 496.1 682 52.5
SGA_v2.0_scaffold95G28889 Striga asiatica HOM05D006822 ORTHO05D008884 9.3e-138 495.0 640 52.3
Nn1g01174 Nelumbo nucifera HOM05D006822 ORTHO05D008884 2.1e-137 493.8 552 55.1
THA.LOC104817014 Tarenaya hassleriana HOM05D006822 ORTHO05D008884 1.9e-135 487.3 608 55.4
Aa31LG1G11250 Aethionema arabicum HOM05D006822 ORTHO05D008884 3.5e-129 466.5 667 51.9
CDE11G0821 Ceratophyllum demersum HOM05D006822 ORTHO05D008884 6.7e-128 462.2 624 48.1
Lsat_1_v5_gn_3_133341 Lactuca sativa HOM05D006822 ORTHO05D008884 9.7e-127 458.4 511 51.9
Medtr7g075185 Medicago truncatula HOM05D006822 ORTHO05D008884 1.6e-126 457.6 631 46.4
AT1G01930 Arabidopsis thaliana HOM05D006822 ORTHO05D008884 3.7e-126 456.4 522 53.1
HPP92_015074 Vanilla planifolia HOM05D006822 ORTHO05D008884 2.4e-125 453.8 667 46.0
Sp1g00370 Schrenkiella parvula HOM05D006822 ORTHO05D008884 4.1e-125 453.0 527 51.6
Actinidia31423 Actinidia chinensis HOM05D006822 ORTHO05D008884 7.7e-124 448.7 653 49.2
AL1G10390 Arabidopsis lyrata HOM05D006822 ORTHO05D008884 7.7e-124 448.7 518 53.3
Carub.0001s0031 Capsella rubella HOM05D006822 ORTHO05D008884 1.2e-121 441.4 517 51.6
Os04g0574600 Oryza sativa ssp. japonica HOM05D006822 ORTHO05D008884 4.6e-121 439.5 517 48.5
Zm00001eb073430 Zea mays HOM05D006822 ORTHO05D008884 1.8e-120 437.6 513 49.5
Thhalv10007219m.g Eutrema salsugineum HOM05D006822 ORTHO05D008884 3.0e-120 436.8 537 51.4
unitig_22.g5376 Utricularia gibba HOM05D006822 ORTHO05D008884 6.7e-120 435.6 627 46.7
MBI04_g46545_MAGBIO Magnolia biondii HOM05D006822 ORTHO05D008884 4.8e-118 429.5 547 52.3
C08p53940 Brassica napus HOM05D006822 ORTHO05D008884 4.5e-116 422.9 517 50.1
BolC8t52907H Brassica oleracea HOM05D006822 ORTHO05D008884 4.5e-116 422.9 517 50.1
ECA236G3401 Erigeron canadensis HOM05D006822 ORTHO05D008884 2.2e-115 420.6 542 51.3
BraA09t42269Z Brassica rapa HOM05D006822 ORTHO05D008884 8.5e-115 418.7 505 50.5
HanXRQChr13g0425441 Helianthus annuus HOM05D006822 ORTHO05D008884 2.7e-113 413.7 524 48.5
CSS0048598 Camellia sinensis var. sinensis HOM05D006822 ORTHO05D008884 4.1e-109 399.8 417 57.1
Eucgr.L02337 Eucalyptus grandis HOM05D006822 ORTHO05D008884 3.0e-104 383.6 566 47.9
SEGI_38546 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 2.6e-103 380.6 664 43.1
ECA240G3107 Erigeron canadensis HOM05D006822 ORTHO05D008884 5.9e-92 342.8 402 52.7
COL.COLO4_05508 Corchorus olitorius HOM05D006822 ORTHO05D008884 1.5e-90 338.2 373 52.0
ATR0757G063 Amborella trichopoda HOM05D006822 ORTHO05D008884 1.8e-85 321.2 383 50.1
Mapoly0008s0196 Marchantia polymorpha HOM05D006822 ORTHO05D008884 7.7e-84 315.8 527 40.2
Pp3c3_38070 Physcomitrium patens HOM05D006822 ORTHO05D008884 2.1e-81 307.8 516 39.5
AagrBONN_evm.TU.Sc2ySwM_117.565 Anthoceros agrestis HOM05D006822 ORTHO05D008884 1.0e-75 288.9 571 39.4
CARHR000420 Cardamine hirsuta HOM05D006822 ORTHO05D008884 6.4e-62 243.0 309 49.5
CARHR000430 Cardamine hirsuta HOM05D006822 ORTHO05D008884 2.8e-57 227.6 225 57.8
Cre07.g325715 Chlamydomonas reinhardtii HOM05D006822 ORTHO05D008884 3.2e-53 214.2 480 34.4
SEGI_35234 Sequoiadendron giganteum HOM05D006822 ORTHO05D008884 2.5e-42 177.9 230 47.4
Cfa022202 Carpinus fangiana HOM05D006822 ORTHO05D004559 3.4e-31 141.0 576 28.3
PRCOL_00005597 Prasinoderma coloniale HOM05D006822 ORTHO05D008884 4.5e-31 140.6 339 31.6
Medtr7g075430 Medicago truncatula HOM05D006822 ORTHO05D008884 4.6e-28 130.6 151 54.3
Medtr7g075450 Medicago truncatula HOM05D006822 ORTHO05D008884 5.7e-10 70.5 101 46.5
arahy.Tifrunner.gnm1.ann1.EYK22X Arachis hypogaea HOM05D006822 ORTHO05D008884 3.7e-09 67.8 44 65.9
ATR0757G024 Amborella trichopoda HOM05D006822 ORTHO05D004559 8.2e-09 66.6 165 44.8


User provided reference genes

Program Settings