Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN01G0914 Fragaria x ananassa HOM05D000151 ORTHO05D000074 4.7e-108 394.4 183 100.0
FAN10G3518 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.7e-46 189.9 109 85.3
FAN03G2102 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.5e-37 159.5 90 84.4
Prupe.5G168800 Prunus persica HOM05D000151 ORTHO05D000074 5.8e-18 95.1 162 36.4
Prupe.5G169100 Prunus persica HOM05D000151 ORTHO05D000074 5.8e-18 95.1 162 36.4
MD13G1047500 Malus domestica HOM05D000151 ORTHO05D000074 1.1e-16 90.9 174 33.3
Prupe.1G009400 Prunus persica HOM05D000151 ORTHO05D000074 2.5e-16 89.7 172 34.9
RcHm_v2.0_Chr7g0224141 Rosa chinensis HOM05D000151 ORTHO05D000074 4.6e-15 85.5 180 34.4
RcHm_v2.0_Chr2g0092531 Rosa chinensis HOM05D000151 ORTHO05D000074 7.9e-15 84.7 197 29.9
Prupe.1G273900 Prunus persica HOM05D000151 ORTHO05D000074 2.3e-14 83.2 177 35.0
Prupe.1G208900 Prunus persica HOM05D000151 ORTHO05D000074 5.1e-14 82.0 177 35.0
RcHm_v2.0_Chr7g0223801 Rosa chinensis HOM05D000151 ORTHO05D000074 4.3e-13 79.0 159 34.6
Prupe.5G168600 Prunus persica HOM05D000151 ORTHO05D000074 9.7e-13 77.8 158 32.3
Psat5g177000 Pisum sativum HOM05D000151 ORTHO05D000074 1.3e-12 77.4 147 34.0
MD10G1043600 Malus domestica HOM05D000151 ORTHO05D000074 3.7e-12 75.9 167 34.1
TPR.G32987 Trifolium pratense HOM05D000151 ORTHO05D000074 3.7e-12 75.9 155 34.2
Haze_25246 Corylus avellana HOM05D000151 ORTHO05D000074 8.2e-12 74.7 104 37.5
FvH4_4g29110 Fragaria vesca HOM05D000151 ORTHO05D000074 8.2e-12 74.7 161 31.1
TPR.G18206 Trifolium pratense HOM05D000151 ORTHO05D000074 1.4e-11 73.9 150 31.3
FvH4_1g05590 Fragaria vesca HOM05D000151 ORTHO05D000074 1.8e-11 73.6 149 30.9
FAN26G0042 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.8e-11 73.6 149 30.2
FAN26G2483 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.8e-11 73.6 149 30.2
FAN03G1312 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.4e-11 73.2 189 30.2
Prupe.8G049800 Prunus persica HOM05D000151 ORTHO05D000074 2.4e-11 73.2 159 30.8
QL01p024159 Quercus lobata HOM05D000151 ORTHO05D000074 3.1e-11 72.8 136 30.1
FAN06G3752 Fragaria x ananassa HOM05D000151 ORTHO05D000074 4.1e-11 72.4 189 30.7
FvH4_4g29670 Fragaria vesca HOM05D000151 ORTHO05D000074 5.3e-11 72.0 182 29.1
FAN12G0320 Fragaria x ananassa HOM05D000151 ORTHO05D000074 5.3e-11 72.0 182 29.1
FAN23G0564 Fragaria x ananassa HOM05D000151 ORTHO05D000074 6.9e-11 71.6 160 31.2
FAN06G3143 Fragaria x ananassa HOM05D000151 ORTHO05D000074 9.0e-11 71.2 189 30.2
FvH4_7g29280 Fragaria vesca HOM05D000151 ORTHO05D000074 1.5e-10 70.5 187 30.5
FAN17G0578 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.5e-10 70.5 161 29.2
FvH4_1g05580 Fragaria vesca HOM05D000151 ORTHO05D000074 2.6e-10 69.7 162 30.9
FAN09G3033 Fragaria x ananassa HOM05D000151 ORTHO05D000074 4.5e-10 68.9 149 30.9
FAN10G0230 Fragaria x ananassa HOM05D000151 ORTHO05D000074 7.7e-10 68.2 127 34.6
FAN19G0025 Fragaria x ananassa HOM05D000151 ORTHO05D000074 7.7e-10 68.2 148 31.8
TPR.G21838 Trifolium pratense HOM05D000151 ORTHO05D000074 7.7e-10 68.2 156 29.5
FvH4_1g05560 Fragaria vesca HOM05D000151 ORTHO05D000074 1.3e-09 67.4 156 28.2
FvH4_6g52260 Fragaria vesca HOM05D000151 ORTHO05D000074 1.3e-09 67.4 149 30.2
FAN01G1436 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.7e-09 67.0 127 34.6
FAN14G3774 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.7e-09 67.0 149 30.2
FAN03G0848 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.9e-09 66.2 127 34.6
FAN22G0916 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.9e-09 66.2 175 29.1
Prupe.3G068500 Prunus persica HOM05D000151 ORTHO05D000074 2.9e-09 66.2 163 31.9
MD13G1075200 Malus domestica HOM05D000151 ORTHO05D000074 3.8e-09 65.9 150 31.3
Dinv28404 Davidia involucrata HOM05D000151 ORTHO05D000074 5.0e-09 65.5 151 30.5
FAN07G2226 Fragaria x ananassa HOM05D000151 ORTHO05D000074 5.0e-09 65.5 148 31.8
TPR.G12009 Trifolium pratense HOM05D000151 ORTHO05D000074 6.5e-09 65.1 160 28.1
Actinidia09337 Actinidia chinensis HOM05D000151 ORTHO05D000074 8.5e-09 64.7 179 27.9
FAN12G3793 Fragaria x ananassa HOM05D000151 ORTHO05D000074 8.5e-09 64.7 106 34.9
Cfa018639 Carpinus fangiana HOM05D000151 ORTHO05D000074 1.1e-08 64.3 98 36.7
TPR.G33767 Trifolium pratense HOM05D000151 ORTHO05D000074 1.1e-08 64.3 164 28.0
FAN26G2706 Fragaria x ananassa HOM05D003449 ORTHO05D004133 1.4e-08 63.9 93 37.6
Nn6g31858 Nelumbo nucifera HOM05D000151 ORTHO05D000074 1.9e-08 63.5 143 34.3
Prupe.1G076100 Prunus persica HOM05D000151 ORTHO05D000074 1.9e-08 63.5 172 30.2
FAN02G4312 Fragaria x ananassa HOM05D000151 ORTHO05D000074 2.5e-08 63.2 116 30.2
Haze_17426 Corylus avellana HOM05D000566 ORTHO05D000686 3.2e-08 62.8 101 34.7
Haze_17429 Corylus avellana HOM05D000151 ORTHO05D000074 3.2e-08 62.8 101 34.7
FAN22G1937 Fragaria x ananassa HOM05D000151 ORTHO05D000074 3.2e-08 62.8 159 27.7
RcHm_v2.0_Chr4g0442931 Rosa chinensis HOM05D000151 ORTHO05D000074 3.2e-08 62.8 131 32.8
FvH4_4g29691 Fragaria vesca HOM05D000151 ORTHO05D000074 7.2e-08 61.6 98 32.7
FAN22G0829 Fragaria x ananassa HOM05D000151 ORTHO05D000074 7.2e-08 61.6 90 37.8
Haze_17430 Corylus avellana HOM05D000151 ORTHO05D000074 9.4e-08 61.2 93 35.5
Dinv28402 Davidia involucrata HOM05D000151 ORTHO05D000074 9.4e-08 61.2 121 30.6
FAN19G1756 Fragaria x ananassa HOM05D000151 ORTHO05D000074 9.4e-08 61.2 101 35.6
Dinv28380 Davidia involucrata HOM05D006127 ORTHO05D007465 1.2e-07 60.8 97 34.0
FAN23G0944 Fragaria x ananassa HOM05D000113 ORTHO05D002571 1.2e-07 60.8 155 31.6
Dinv28403 Davidia involucrata HOM05D000151 ORTHO05D000074 1.6e-07 60.5 93 35.5
FAN26G0107 Fragaria x ananassa HOM05D000113 ORTHO05D002571 1.6e-07 60.5 97 40.2
FAN26G1920 Fragaria x ananassa HOM05D000113 ORTHO05D002571 1.6e-07 60.5 97 40.2
FAN28G2970 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.6e-07 60.5 120 30.8
Ciclev10001350m.g Citrus clementina HOM05D000151 ORTHO05D000074 2.1e-07 60.1 91 37.4
Rhsim02G0226200 Rhododendron simsii HOM05D000151 ORTHO05D000074 2.1e-07 60.1 112 37.5
FvH4_1g06763 Fragaria vesca HOM05D000151 ORTHO05D000074 2.7e-07 59.7 92 34.8
vmacro11300 Vaccinium macrocarpon HOM05D000151 ORTHO05D000074 2.7e-07 59.7 165 30.9
Cfa008697 Carpinus fangiana HOM05D000151 ORTHO05D000074 3.6e-07 59.3 145 31.7
Dinv28382 Davidia involucrata HOM05D000151 ORTHO05D000074 3.6e-07 59.3 97 34.0
FvH4_4g30610 Fragaria vesca HOM05D000151 ORTHO05D000074 3.6e-07 59.3 120 30.8
FvH4_7g33871 Fragaria vesca HOM05D000151 ORTHO05D000074 3.6e-07 59.3 27 100.0
FAN17G0514 Fragaria x ananassa HOM05D000087 ORTHO05D001646 3.6e-07 59.3 97 35.1
FAN19G0417 Fragaria x ananassa HOM05D000151 ORTHO05D000074 3.6e-07 59.3 92 34.8
FAN28G2575 Fragaria x ananassa HOM05D003449 ORTHO05D004133 3.6e-07 59.3 81 38.3
RcHm_v2.0_Chr2g0133991 Rosa chinensis HOM05D000151 ORTHO05D000074 3.6e-07 59.3 197 26.9
FAN28G0166 Fragaria x ananassa HOM05D000151 ORTHO05D000074 4.6e-07 58.9 115 30.4
Prupe.1G158300 Prunus persica HOM05D000151 ORTHO05D000074 6.1e-07 58.5 90 37.8
Rhsim08G0250200 Rhododendron simsii HOM05D000151 ORTHO05D000074 6.1e-07 58.5 156 26.9
FvH4_4g30602 Fragaria vesca HOM05D000151 ORTHO05D000074 7.9e-07 58.2 172 28.5
Dinv28455 Davidia involucrata HOM05D000151 ORTHO05D000074 1.0e-06 57.8 92 34.8
FAN12G0243 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.0e-06 57.8 117 31.6
CANSAT01G2245 Cannabis sativa HOM05D000151 ORTHO05D000074 2.3e-06 56.6 94 31.9
Haze_25243 Corylus avellana HOM05D001565 ORTHO05D029147 2.3e-06 56.6 69 36.2
Actinidia15471 Actinidia chinensis HOM05D000151 ORTHO05D000074 3.9e-06 55.8 146 28.8
FAN15G2038 Fragaria x ananassa HOM05D000151 ORTHO05D000074 3.9e-06 55.8 99 33.3
Thecc.03G245200 Theobroma cacao HOM05D000151 ORTHO05D000074 3.9e-06 55.8 138 30.4
Thecc.06G025900 Theobroma cacao HOM05D000151 ORTHO05D000074 3.9e-06 55.8 133 28.6
FAN19G2647 Fragaria x ananassa HOM05D000151 ORTHO05D000074 5.1e-06 55.5 125 28.0
FvH4_4g29690 Fragaria vesca HOM05D000151 ORTHO05D000074 6.7e-06 55.1 111 34.2
FvH4_4g30240 Fragaria vesca HOM05D000151 ORTHO05D000074 6.7e-06 55.1 91 37.4
FAN22G0205 Fragaria x ananassa HOM05D000151 ORTHO05D000074 6.7e-06 55.1 96 35.4
FvH4_2g19380 Fragaria vesca HOM05D000151 ORTHO05D000074 8.8e-06 54.7 99 32.3
FvH4_4g30230 Fragaria vesca HOM05D000151 ORTHO05D000074 8.8e-06 54.7 126 31.7
FAN12G0173 Fragaria x ananassa HOM05D000151 ORTHO05D000074 8.8e-06 54.7 84 33.3
Rhsim02G0223800 Rhododendron simsii HOM05D000151 ORTHO05D000074 8.8e-06 54.7 90 41.1
TAR628G1200 Trochodendron aralioides HOM05D000151 ORTHO05D000074 8.8e-06 54.7 114 28.9


User provided reference genes

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