Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN01G0621 Fragaria x ananassa HOM05D000966 ORTHO05D007323 3.7e-169 598.2 317 100.0
FAN03G0153 Fragaria x ananassa HOM05D000966 ORTHO05D007323 3.6e-148 528.5 317 90.2
RcHm_v2.0_Chr1g0329491 Rosa chinensis HOM05D000966 ORTHO05D007323 1.2e-124 450.3 261 90.4
Prupe.8G038500 Prunus persica HOM05D000966 ORTHO05D007323 1.2e-95 354.0 272 74.6
MD05G1031500 Malus domestica HOM05D000966 ORTHO05D007323 2.8e-92 342.8 248 77.4
QL02p038471 Quercus lobata HOM05D000966 ORTHO05D007323 3.5e-79 299.3 265 64.9
Sabra05G0148900 Salix brachista HOM05D000966 ORTHO05D007323 6.0e-79 298.5 315 55.9
CiPaw.15G013800 Carya illinoinensis HOM05D000966 ORTHO05D007323 7.9e-79 298.1 265 63.8
Potri.005G195400 Populus trichocarpa HOM05D000966 ORTHO05D007323 1.8e-78 297.0 264 62.1
Cfa018294 Carpinus fangiana HOM05D000966 ORTHO05D007323 4.3e-77 292.4 263 63.5
TWI34G1291 Tripterygium wilfordii HOM05D000966 ORTHO05D007323 4.0e-75 285.8 259 64.1
TAR381G1161 Trochodendron aralioides HOM05D000966 ORTHO05D007323 5.3e-75 285.4 268 61.6
Cpa.g.sc49.86 Carica papaya HOM05D000966 ORTHO05D007323 9.0e-75 284.6 265 60.8
Atru.chr13.2052 Acer truncatum HOM05D000966 ORTHO05D007323 4.5e-74 282.3 264 62.9
Gorai.010G131600 Gossypium raimondii HOM05D000966 ORTHO05D007323 8.4e-73 278.1 267 58.8
Gohir.D06G115100 Gossypium hirsutum HOM05D000966 ORTHO05D007323 1.4e-72 277.3 267 58.4
Manes.12G141700 Manihot esculenta HOM05D000966 ORTHO05D007323 3.2e-72 276.2 264 60.6
Ciclev10000952m.g Citrus clementina HOM05D000966 ORTHO05D007323 4.2e-72 275.8 253 63.2
Gohir.A06G111200 Gossypium hirsutum HOM05D000966 ORTHO05D007323 5.5e-72 275.4 266 58.6
Duzib116G0132 Durio zibethinus HOM05D000966 ORTHO05D007323 2.1e-71 273.5 265 57.7
Thecc.08G157600 Theobroma cacao HOM05D000966 ORTHO05D007323 1.1e-69 267.7 265 58.9
Ca_10671_v3 Cicer arietinum L. HOM05D000966 ORTHO05D007323 1.1e-67 261.2 261 58.6
Lalb_Chr02g0141501 Lupinus albus HOM05D000966 ORTHO05D007323 1.4e-67 260.8 265 58.1
VMungo0720G0673 Vigna mungo HOM05D000966 ORTHO05D007323 4.5e-66 255.8 258 56.6
Sed0009464 Sechium edule HOM05D000966 ORTHO05D007323 3.8e-65 252.7 267 55.1
ClCG08G008820 Citrullus lanatus HOM05D000966 ORTHO05D007323 5.0e-65 252.3 268 55.6
Phvul.007G082400 Phaseolus vulgaris HOM05D000966 ORTHO05D007323 5.0e-65 252.3 258 56.2
arahy.Tifrunner.gnm1.ann1.Z2GQ5K Arachis hypogaea HOM05D000966 ORTHO05D007323 8.5e-65 251.5 262 57.3
Psat6g191160 Pisum sativum HOM05D000966 ORTHO05D007323 8.5e-65 251.5 261 57.5
MELO3C008329.2 Cucumis melo HOM05D000966 ORTHO05D007323 1.4e-64 250.8 268 54.1
CANSAT25G2301 Cannabis sativa HOM05D000966 ORTHO05D007323 2.5e-64 250.0 262 55.3
arahy.Tifrunner.gnm1.ann1.83HUSC Arachis hypogaea HOM05D000966 ORTHO05D007323 5.5e-64 248.8 262 56.9
CsaV3_6G005070 Cucumis sativus L. HOM05D000966 ORTHO05D007323 2.1e-63 246.9 268 55.2
Lj5g0028132 Lotus japonicus HOM05D000966 ORTHO05D007323 6.1e-63 245.4 261 55.2
Haze_17793 Corylus avellana HOM05D000966 ORTHO05D007323 1.3e-62 244.2 364 46.2
PSO170G0768 Papaver somniferum HOM05D000966 ORTHO05D007323 2.3e-62 243.4 273 54.2
Glyma.20G168900 Glycine max HOM05D000966 ORTHO05D007323 8.7e-62 241.5 258 55.8
Glyma.10G222800 Glycine max HOM05D000966 ORTHO05D007323 1.1e-61 241.1 258 55.8
Nn3g18699 Nelumbo nucifera HOM05D000966 ORTHO05D007323 1.5e-61 240.7 260 56.2
PSO700G0340 Papaver somniferum HOM05D000966 ORTHO05D007323 5.7e-61 238.8 273 53.8
Dinv25888 Davidia involucrata HOM05D000044 ORTHO05D002853 7.4e-61 238.4 258 56.2
TPR.G17050 Trifolium pratense HOM05D000966 ORTHO05D007323 3.7e-60 236.1 262 56.5
Medtr1g098000 Medicago truncatula HOM05D000966 ORTHO05D007323 8.2e-60 235.0 258 55.8
Sc20g0003630 Simmondsia chinensis HOM05D000966 ORTHO05D007323 3.1e-59 233.0 262 54.6
Hma1.2p1_0081F.1_g042500 Hydrangea macrophylla HOM05D000966 ORTHO05D007323 2.6e-58 229.9 266 50.0
Medtr1g098370 Medicago truncatula HOM05D000966 ORTHO05D007323 3.4e-58 229.6 258 55.4
AL2G36860 Arabidopsis lyrata HOM05D000966 ORTHO05D007323 1.0e-57 228.0 260 53.8
Eucgr.F02689 Eucalyptus grandis HOM05D000966 ORTHO05D007323 1.3e-57 227.6 242 55.4
THA.LOC104812030 Tarenaya hassleriana HOM05D000966 ORTHO05D007323 2.2e-57 226.9 243 55.6
Carub.0002s2362 Capsella rubella HOM05D000966 ORTHO05D007323 2.9e-57 226.5 260 53.5
PGR042G2706 Punica granatum HOM05D000966 ORTHO05D007323 2.9e-57 226.5 248 53.6
Sp5g31860 Schrenkiella parvula HOM05D000966 ORTHO05D007323 1.9e-56 223.8 258 53.5
Thhalv10018466m.g Eutrema salsugineum HOM05D000966 ORTHO05D007323 3.2e-56 223.0 259 55.2
Aa31LG4G6790 Aethionema arabicum HOM05D000966 ORTHO05D007323 1.8e-54 217.2 244 53.7
AT1G76710 Arabidopsis thaliana HOM05D000966 ORTHO05D007323 3.0e-54 216.5 263 52.9
ATR0584G286 Amborella trichopoda HOM05D000966 ORTHO05D007323 6.7e-54 215.3 262 50.4
Aqoxy4G02511 Aquilegia oxysepala HOM05D000966 ORTHO05D007323 2.6e-53 213.4 269 49.1
BcaC08g47180 Brassica carinata HOM05D001345 ORTHO05D001190 1.4e-51 207.6 249 53.4
AUR62026672 Chenopodium quinoa HOM05D000966 ORTHO05D007323 2.5e-48 196.8 258 49.6
GSVIVG01034572001 Vitis vinifera HOM05D000966 ORTHO05D007323 5.5e-48 195.7 255 47.1
AUR62040579 Chenopodium quinoa HOM05D000966 ORTHO05D007323 3.6e-47 193.0 258 48.1
Hund26681 Selenicereus undatus HOM05D000966 ORTHO05D007323 4.7e-47 192.6 264 47.3
SGA_v2.0_scaffold109G31136 Striga asiatica HOM05D006713 ORTHO05D007323 6.1e-47 192.2 263 46.8
Ah.02g124940 Amaranthus hybridus HOM05D000966 ORTHO05D007323 2.0e-45 187.2 258 45.0
MD10G1033100 Malus domestica HOM05D000966 ORTHO05D007323 4.4e-45 186.0 134 73.9
CARHR070260 Cardamine hirsuta HOM05D000966 ORTHO05D007323 9.7e-45 184.9 263 46.0
SalBow6G0098 Salvia bowleyana HOM05D000966 ORTHO05D007323 9.1e-43 178.3 262 44.3
MSTRG.22010 Avicennia marina HOM05D000966 ORTHO05D007323 1.6e-42 177.6 272 44.5
Nitab4.5_0000949g0070 Nicotiana tabacum HOM05D000966 ORTHO05D007323 7.7e-42 175.3 233 45.1
A07p42380 Brassica napus HOM05D000966 ORTHO05D007323 2.2e-41 173.7 259 45.2
BcaC08g47221 Brassica carinata HOM05D000966 ORTHO05D007323 2.9e-41 173.3 242 47.1
Nitab4.5_0000617g0300 Nicotiana tabacum HOM05D000966 ORTHO05D007323 2.9e-41 173.3 233 45.1
Migut.N03097 Erythranthe guttata HOM05D000966 ORTHO05D007323 5.0e-41 172.6 278 43.2
CDE12G0409 Ceratophyllum demersum HOM05D000966 ORTHO05D007323 1.5e-40 171.0 270 44.1
Peaxi162Scf01038g00145 Petunia axillaris HOM05D000966 ORTHO05D007323 4.2e-40 169.5 237 44.3
Oeu020493.1 Olea europaea HOM05D000966 ORTHO05D007323 1.2e-39 167.9 268 42.5
BolC6t40119H Brassica oleracea HOM05D000966 ORTHO05D007323 6.1e-39 165.6 262 42.0
BraA07t31764Z Brassica rapa HOM05D000966 ORTHO05D007323 1.8e-38 164.1 276 42.8
Peaxi162Scf00088g00919 Petunia axillaris HOM05D000966 ORTHO05D007323 3.3e-37 159.8 234 41.9
C06p50930 Brassica napus HOM05D000966 ORTHO05D007323 1.3e-36 157.9 271 42.1
DCAR_001155 Daucus carota HOM05D000966 ORTHO05D007323 1.4e-35 154.5 257 37.7
Cc03_g11990 Coffea canephora HOM05D000966 ORTHO05D007323 5.3e-35 152.5 253 39.1
Os04g0429100 Oryza sativa ssp. japonica HOM05D000966 ORTHO05D007323 1.3e-33 147.9 279 35.5
COL.COLO4_13799 Corchorus olitorius HOM05D000966 ORTHO05D007323 2.9e-33 146.7 243 44.9
unitig_18.g30053 Utricularia gibba HOM05D000966 ORTHO05D007323 5.0e-33 146.0 202 44.6
unitig_8.g4809 Utricularia gibba HOM05D000966 ORTHO05D007323 5.0e-33 146.0 202 44.6
EL10Ac1g01592 Beta vulgaris HOM05D000966 ORTHO05D007323 1.1e-32 144.8 147 54.4
Zm00001eb082920 Zea mays HOM05D000966 ORTHO05D007323 1.5e-32 144.4 283 35.7
MD10G1033000 Malus domestica HOM05D000966 ORTHO05D007323 5.5e-32 142.5 96 80.2
Lj4C702T3 Lonicera japonica HOM05D000966 ORTHO05D007323 1.2e-31 141.4 243 40.3
ECA233G6088 Erigeron canadensis HOM05D000966 ORTHO05D007323 3.6e-31 139.8 233 41.2
CAN.G555.11 Capsicum annuum HOM05D000966 ORTHO05D007323 4.4e-29 132.9 231 38.5
HanXRQChr08g0226091 Helianthus annuus HOM05D000966 ORTHO05D007323 5.7e-29 132.5 240 39.6
Medtr1g098030 Medicago truncatula HOM05D000966 ORTHO05D007323 1.7e-28 131.0 209 47.4
Oeu056130.2 Olea europaea HOM05D000966 ORTHO05D007323 1.1e-27 128.3 250 35.6
Sopen07g004390 Solanum pennellii HOM05D000966 ORTHO05D007323 1.1e-27 128.3 261 35.6
Solyc07g008460.3 Solanum lycopersicum HOM05D000966 ORTHO05D007323 1.4e-27 127.9 261 36.0
PGSC0003DMG400010972 Solanum tuberosum HOM05D000966 ORTHO05D007323 1.4e-27 127.9 231 36.8
A07p42370 Brassica napus HOM05D000966 ORTHO05D007323 4.1e-27 126.3 114 58.8
Cc00_g32880 Coffea canephora HOM05D000966 ORTHO05D007323 7.0e-27 125.6 241 35.3
Actinidia17776 Actinidia chinensis HOM05D000966 ORTHO05D007323 2.0e-26 124.0 252 36.9
Lsat_1_v5_gn_8_521 Lactuca sativa HOM05D000966 ORTHO05D007323 5.5e-24 115.9 233 38.2
GSVIVG01034571001 Vitis vinifera HOM05D000966 ORTHO05D007323 6.1e-23 112.5 126 48.4
SEGI_26212 Sequoiadendron giganteum HOM05D000966 ORTHO05D007323 5.7e-21 105.9 295 31.5
HPP92_009293 Vanilla planifolia HOM05D000966 ORTHO05D007323 1.7e-20 104.4 103 49.5
CSS0040268 Camellia sinensis var. sinensis HOM05D000966 ORTHO05D007323 5.9e-18 95.9 123 50.4
Rhsim06G0128000 Rhododendron simsii HOM05D000966 ORTHO05D007323 5.0e-17 92.8 254 31.1
Cc03_g12000 Coffea canephora HOM05D000966 ORTHO05D007323 7.5e-13 79.0 191 30.4
A07p42360 Brassica napus HOM05D001345 ORTHO05D001190 5.2e-06 56.2 41 70.7
ECA234G4770 Erigeron canadensis HOM05D000966 ORTHO05D007323 8.9e-06 55.5 66 48.5


User provided reference genes

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