Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN01G0307 Fragaria x ananassa HOM05D000974 ORTHO05D007456 7.0e-90 334.0 171 100.0
FAN10G1776 Fragaria x ananassa HOM05D000974 ORTHO05D007456 6.4e-67 257.7 304 54.6
FAN06G4709 Fragaria x ananassa HOM05D000974 ORTHO05D007456 4.1e-66 255.0 304 53.9
FvH4_7g31090 Fragaria vesca HOM05D000974 ORTHO05D007456 2.0e-65 252.7 304 53.6
FAN06G0673 Fragaria x ananassa HOM05D000974 ORTHO05D007456 2.0e-65 252.7 304 53.6
FAN03G2436 Fragaria x ananassa HOM05D000974 ORTHO05D006000 1.3e-64 250.0 298 54.0
FAN10G1818 Fragaria x ananassa HOM05D000974 ORTHO05D006000 1.1e-63 246.9 298 53.7
RcHm_v2.0_Chr1g0380171 Rosa chinensis HOM05D000974 ORTHO05D007456 4.0e-61 238.4 298 51.7
MD07G1285800 Malus domestica HOM05D000974 ORTHO05D007456 1.0e-40 170.6 313 39.3
TWI39G1278 Tripterygium wilfordii HOM05D000974 ORTHO05D007456 1.4e-37 160.2 304 38.8
Prupe.2G308000 Prunus persica HOM05D000974 ORTHO05D002201 4.4e-36 155.2 307 37.8
MD01G1215900 Malus domestica HOM05D000974 ORTHO05D007456 2.2e-35 152.9 313 38.0
Potri.015G021400 Populus trichocarpa HOM05D000974 ORTHO05D007456 7.1e-34 147.9 302 36.8
Potri.012G031000 Populus trichocarpa HOM05D000974 ORTHO05D007456 2.1e-33 146.4 304 36.2
ClCG01G000560 Citrullus lanatus HOM05D000974 ORTHO05D007456 4.6e-33 145.2 304 36.2
Manes.06G157800 Manihot esculenta HOM05D000974 ORTHO05D007456 4.6e-33 145.2 302 37.1
Potri.015G021100 Populus trichocarpa HOM05D000974 ORTHO05D007456 4.6e-33 145.2 302 36.4
CsaV3_5G000660 Cucumis sativus L. HOM05D000974 ORTHO05D007456 7.8e-33 144.4 304 36.2
Ciclev10005489m.g Citrus clementina HOM05D000974 ORTHO05D007456 1.0e-32 144.1 311 36.3
Haze_00118 Corylus avellana HOM05D000974 ORTHO05D007456 1.0e-32 144.1 304 36.8
DCAR_020306 Daucus carota HOM05D000974 ORTHO05D007456 5.1e-32 141.7 305 36.4
Actinidia34202 Actinidia chinensis HOM05D000974 ORTHO05D007456 2.5e-31 139.4 304 37.2
PGR142G2075 Punica granatum HOM05D000974 ORTHO05D007456 3.3e-31 139.0 309 36.6
Sed0023834 Sechium edule HOM05D000974 ORTHO05D007456 2.1e-30 136.3 304 34.5
MBI07_g45742_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 2.8e-30 136.0 196 46.4
CANSAT21G0519 Cannabis sativa HOM05D000974 ORTHO05D007456 1.8e-29 133.3 315 33.3
Oeu060978.1 Olea europaea HOM05D000974 ORTHO05D007456 1.8e-29 133.3 303 34.7
AUR62019342 Chenopodium quinoa HOM05D000974 ORTHO05D007456 3.1e-29 132.5 285 36.5
Medtr3g090955 Medicago truncatula HOM05D000974 ORTHO05D007456 3.1e-29 132.5 303 33.3
Cc02_g01830 Coffea canephora HOM05D000974 ORTHO05D007456 5.3e-29 131.7 304 34.9
CSS0027071 Camellia sinensis var. sinensis HOM05D000974 ORTHO05D007456 9.0e-29 131.0 311 33.8
vmacro10108 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 1.5e-28 130.2 304 34.9
AUR62006147 Chenopodium quinoa HOM05D000974 ORTHO05D007456 2.0e-28 129.8 305 33.8
Migut.F00239 Erythranthe guttata HOM05D000974 ORTHO05D007456 4.5e-28 128.6 313 33.2
GSVIVG01028702001 Vitis vinifera HOM05D000974 ORTHO05D007456 7.6e-28 127.9 303 33.3
Ca_16682_v3 Cicer arietinum L. HOM05D000974 ORTHO05D007456 1.7e-27 126.7 300 32.7
Lalb_Chr11g0066601 Lupinus albus HOM05D000974 ORTHO05D007456 2.2e-27 126.3 304 32.2
Psat5g079560 Pisum sativum HOM05D000974 ORTHO05D007456 2.2e-27 126.3 303 33.7
Lj1A1013G39 Lonicera japonica HOM05D000974 ORTHO05D007456 3.8e-27 125.6 302 34.4
EL10Ac3g05342 Beta vulgaris HOM05D000974 ORTHO05D007456 6.4e-27 124.8 314 33.8
VMungo1309G2916 Vigna mungo HOM05D000974 ORTHO05D007456 8.4e-27 124.4 307 32.2
CiPaw.05G257300 Carya illinoinensis HOM05D000974 ORTHO05D007456 1.1e-26 124.0 121 58.7
Lsat_1_v5_gn_9_57980 Lactuca sativa HOM05D000974 ORTHO05D007456 1.1e-26 124.0 301 34.6
SalBow4G2102 Salvia bowleyana HOM05D000974 ORTHO05D007456 1.4e-26 123.6 309 33.3
Rhsim09G0204100 Rhododendron simsii HOM05D000974 ORTHO05D007456 2.4e-26 122.9 300 33.7
Sabra12G0020600 Salix brachista HOM05D000974 ORTHO05D007456 2.4e-26 122.9 315 33.0
Thecc.03G193600 Theobroma cacao HOM05D000974 ORTHO05D007456 3.2e-26 122.5 302 32.8
Phvul.009G137800 Phaseolus vulgaris HOM05D000974 ORTHO05D007456 9.3e-26 120.9 303 30.0
Lj1g0000480 Lotus japonicus HOM05D000974 ORTHO05D007456 2.1e-25 119.8 305 32.1
arahy.Tifrunner.gnm1.ann1.D5FDUQ Arachis hypogaea HOM05D000974 ORTHO05D007456 2.7e-25 119.4 303 31.7
arahy.Tifrunner.gnm1.ann1.LG8YER Arachis hypogaea HOM05D000974 ORTHO05D007456 2.7e-25 119.4 303 31.7
Nitab4.5_0005625g0010 Nicotiana tabacum HOM05D000974 ORTHO05D007456 2.7e-25 119.4 304 32.2
Duzib084G1361 Durio zibethinus HOM05D000974 ORTHO05D007456 6.0e-25 118.2 265 33.6
Gohir.D09G178500 Gossypium hirsutum HOM05D000974 ORTHO05D007456 6.0e-25 118.2 304 31.9
vmacro06564 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 7.9e-25 117.9 340 30.3
Dinv28331 Davidia involucrata HOM05D000974 ORTHO05D007456 1.0e-24 117.5 255 34.9
Glyma.04G238050 Glycine max HOM05D000974 ORTHO05D007456 1.0e-24 117.5 303 31.7
Glyma.06G125900 Glycine max HOM05D000974 ORTHO05D007456 1.0e-24 117.5 303 30.4
PSO384G1506 Papaver somniferum HOM05D000974 ORTHO05D007456 1.0e-24 117.5 122 57.4
COL.COLO4_35640 Corchorus olitorius HOM05D000974 ORTHO05D007456 1.8e-24 116.7 304 30.9
TAR636G3288 Trochodendron aralioides HOM05D000974 ORTHO05D007456 1.8e-24 116.7 304 33.9
HanXRQChr09g0253031 Helianthus annuus HOM05D000974 ORTHO05D007456 2.3e-24 116.3 111 59.5
Carub.0006s2186 Capsella rubella HOM05D000974 ORTHO05D007456 3.9e-24 115.5 318 32.4
AL6G35490 Arabidopsis lyrata HOM05D000974 ORTHO05D007456 5.1e-24 115.2 319 32.0
Nitab4.5_0002589g0050 Nicotiana tabacum HOM05D000974 ORTHO05D007456 5.1e-24 115.2 302 33.1
TPR.G17305 Trifolium pratense HOM05D000974 ORTHO05D007456 5.1e-24 115.2 308 31.8
CARHR189450 Cardamine hirsuta HOM05D000974 ORTHO05D007456 6.7e-24 114.8 319 31.7
PSO135G0499 Papaver somniferum HOM05D000974 ORTHO05D007456 1.9e-23 113.2 154 48.1
Peaxi162Scf00904g00123 Petunia axillaris HOM05D000974 ORTHO05D007456 1.9e-23 113.2 304 32.2
Gohir.A09G183700 Gossypium hirsutum HOM05D000974 ORTHO05D007456 5.6e-23 111.7 304 30.6
Gorai.006G200500 Gossypium raimondii HOM05D000974 ORTHO05D007456 5.6e-23 111.7 304 31.2
SGA_v2.0_scaffold192G40573 Striga asiatica HOM05D000974 ORTHO05D007456 5.6e-23 111.7 297 32.3
Thhalv10005277m.g Eutrema salsugineum HOM05D000974 ORTHO05D007456 7.4e-23 111.3 319 31.3
ECA232G4254 Erigeron canadensis HOM05D000974 ORTHO05D007456 9.6e-23 110.9 311 31.5
Sp2g23180 Schrenkiella parvula HOM05D000974 ORTHO05D007456 9.6e-23 110.9 320 30.9
AT5G24130 Arabidopsis thaliana HOM05D000974 ORTHO05D007456 1.3e-22 110.5 318 31.4
Cfa016368 Carpinus fangiana HOM05D000974 ORTHO05D007456 1.6e-22 110.2 309 33.3
MBI07_g34227_MAGBIO Magnolia biondii HOM05D000974 ORTHO05D007456 2.1e-22 109.8 304 32.2
Aqoxy7G00132 Aquilegia oxysepala HOM05D000974 ORTHO05D007456 2.8e-22 109.4 308 32.5
BcaNung01212 Brassica carinata HOM05D000974 ORTHO05D007456 2.8e-22 109.4 319 30.7
A06p34970 Brassica napus HOM05D000974 ORTHO05D007456 3.7e-22 109.0 319 30.4
C07p43580 Brassica napus HOM05D000974 ORTHO05D007456 3.7e-22 109.0 319 31.0
BolC7t44885H Brassica oleracea HOM05D000974 ORTHO05D007456 3.7e-22 109.0 319 31.0
BraA06t26421Z Brassica rapa HOM05D000974 ORTHO05D007456 3.7e-22 109.0 319 30.4
THA.LOC104821367 Tarenaya hassleriana HOM05D000974 ORTHO05D007456 8.1e-22 107.8 310 31.9
BcaNung01815 Brassica carinata HOM05D000974 ORTHO05D007456 1.1e-21 107.5 319 30.7
unitig_747.g21851 Utricularia gibba HOM05D000974 ORTHO05D007456 1.8e-21 106.7 265 32.1
Cpa.g.sc34.147 Carica papaya HOM05D000974 ORTHO05D007456 3.1e-21 105.9 304 32.2
DCAR_014533 Daucus carota HOM05D000974 ORTHO05D007456 9.0e-21 104.4 302 33.8
TAR375G0325 Trochodendron aralioides HOM05D000974 ORTHO05D007456 2.6e-20 102.8 309 32.7
Lj3A909T48 Lonicera japonica HOM05D000974 ORTHO05D007456 3.4e-20 102.4 282 31.2
Aa31LG11G3400 Aethionema arabicum HOM05D000974 ORTHO05D007456 1.3e-19 100.5 315 30.2
Atru.chr1.262 Acer truncatum HOM05D000974 ORTHO05D007456 2.2e-19 99.8 103 56.3
SalBow4G1511 Salvia bowleyana HOM05D000974 ORTHO05D007456 2.9e-19 99.4 309 31.4
Lalb_Chr08g0240541 Lupinus albus HOM05D000974 ORTHO05D007456 3.8e-19 99.0 100 52.0
Atru.chr1.258 Acer truncatum HOM05D000974 ORTHO05D007456 6.5e-19 98.2 307 31.6
Rhsim03G0199900 Rhododendron simsii HOM05D000974 ORTHO05D007456 1.9e-18 96.7 304 31.6
Nn1g01835 Nelumbo nucifera HOM05D000974 ORTHO05D007456 5.5e-18 95.1 288 30.9
CDE10G0750 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 2.1e-17 93.2 120 48.3
ATR0589G008 Amborella trichopoda HOM05D000974 ORTHO05D007456 1.8e-16 90.1 98 57.1
Rhsim09G0204200 Rhododendron simsii HOM05D000974 ORTHO05D007456 3.9e-16 89.0 98 54.1
Sopen03g003300 Solanum pennellii HOM05D000974 ORTHO05D007456 5.1e-16 88.6 139 43.2
CiPaw.05G257400 Carya illinoinensis HOM05D000974 ORTHO05D007456 2.5e-15 86.3 58 74.1
PGSC0003DMG400009074 Solanum tuberosum HOM05D000974 ORTHO05D007456 9.6e-15 84.3 91 52.7
Lsat_1_v5_gn_2_134181 Lactuca sativa HOM05D000974 ORTHO05D007456 2.1e-14 83.2 82 52.4
Potri.015G021300 Populus trichocarpa HOM05D000974 ORTHO05D007456 6.2e-14 81.6 58 72.4
Oeu060977.1 Olea europaea HOM05D000974 ORTHO05D007456 8.2e-14 81.3 103 52.4
Oeu060979.1 Olea europaea HOM05D000974 ORTHO05D007456 8.2e-14 81.3 103 52.4
QL09p010742 Quercus lobata HOM05D000974 ORTHO05D007456 8.2e-14 81.3 63 63.5
ECA238G2040 Erigeron canadensis HOM05D005084 ORTHO05D006254 2.4e-13 79.7 95 47.4
Rhsim02G0197500 Rhododendron simsii HOM05D000974 ORTHO05D007456 3.1e-13 79.3 112 45.5
HPP92_005207 Vanilla planifolia HOM05D000974 ORTHO05D007456 3.1e-13 79.3 126 44.4
HanXRQChr14g0462881 Helianthus annuus HOM05D000974 ORTHO05D007456 4.1e-13 79.0 105 43.8
Zm00001eb238160 Zea mays HOM05D000974 ORTHO05D007456 5.3e-13 78.6 107 45.8
vmacro10109 Vaccinium macrocarpon HOM05D000974 ORTHO05D007456 9.0e-13 77.8 118 42.4
Rhsim04G0082700 Rhododendron simsii HOM05D000974 ORTHO05D007456 1.5e-12 77.0 112 44.6
Actinidia08630 Actinidia chinensis HOM05D000974 ORTHO05D007456 5.0e-11 72.0 54 66.7
CDE10G0850 Ceratophyllum demersum HOM05D000974 ORTHO05D007456 2.5e-10 69.7 303 26.4
Hma1.2p1_1655F.1_g295980 Hydrangea macrophylla HOM05D000974 ORTHO05D007456 3.2e-10 69.3 108 45.4
Lalb_Chr08g0240561 Lupinus albus HOM05D000974 ORTHO05D007456 5.5e-10 68.6 63 55.6
Nn3g19050 Nelumbo nucifera HOM05D000974 ORTHO05D007456 2.1e-09 66.6 101 40.6
Zm00001eb345000 Zea mays HOM05D000974 ORTHO05D007456 6.1e-09 65.1 70 54.3
DCAR_022594 Daucus carota HOM05D000974 ORTHO05D007456 1.5e-07 60.5 73 53.4
Os05g0586700 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 1.5e-07 60.5 72 51.4
Os02g0257200 Oryza sativa ssp. japonica HOM05D000974 ORTHO05D007456 2.8e-06 56.2 59 61.0
ATR0589G055 Amborella trichopoda HOM05D000974 ORTHO05D007456 8.2e-06 54.7 69 44.9


User provided reference genes

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