Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN01G0182 Fragaria x ananassa HOM05D006852 ORTHO05D008585 9.9e-223 776.5 417 100.0
FAN06G4754 Fragaria x ananassa HOM05D006852 ORTHO05D008585 2.7e-95 353.2 417 57.8
FvH4_7g01110 Fragaria vesca HOM05D006852 ORTHO05D008585 3.9e-94 349.4 417 57.3
FAN10G4066 Fragaria x ananassa HOM05D006852 ORTHO05D008585 2.5e-93 346.7 169 99.4
FAN03G0769 Fragaria x ananassa HOM05D006852 ORTHO05D008585 1.2e-90 337.8 439 49.4
RcHm_v2.0_Chr1g0316111 Rosa chinensis HOM05D006852 ORTHO05D008585 4.6e-87 325.9 169 95.3
Prupe.2G014400 Prunus persica HOM05D006852 ORTHO05D008585 4.5e-82 309.3 169 89.3
MD07G1011200 Malus domestica HOM05D006852 ORTHO05D008585 7.7e-82 308.5 169 88.8
Manes.07G006500 Manihot esculenta HOM05D006852 ORTHO05D008585 2.9e-81 306.6 169 87.0
Lj3g0018236 Lotus japonicus HOM05D006852 ORTHO05D008585 3.2e-80 303.1 169 86.4
CiPaw.14G000200 Carya illinoinensis HOM05D006852 ORTHO05D008585 1.2e-79 301.2 169 85.8
CANSAT80G1911 Cannabis sativa HOM05D006852 ORTHO05D008585 1.0e-78 298.1 169 84.0
Ciclev10032186m.g Citrus clementina HOM05D006852 ORTHO05D008585 1.4e-78 297.7 169 84.6
Potri.001G266200 Populus trichocarpa HOM05D006852 ORTHO05D008585 2.3e-78 297.0 169 83.4
Gohir.A08G144200 Gossypium hirsutum HOM05D006852 ORTHO05D008585 3.9e-78 296.2 169 84.0
arahy.Tifrunner.gnm1.ann1.5TR8MX Arachis hypogaea HOM05D006852 ORTHO05D008585 8.8e-78 295.0 169 82.8
ECA248G0614 Erigeron canadensis HOM05D006852 ORTHO05D008585 1.1e-77 294.7 169 81.7
Glyma.13G202400 Glycine max HOM05D006852 ORTHO05D008585 1.1e-77 294.7 173 80.9
COL.COLO4_31169 Corchorus olitorius HOM05D006852 ORTHO05D008585 1.5e-77 294.3 169 83.4
Glyma.12G236900 Glycine max HOM05D006852 ORTHO05D008585 1.5e-77 294.3 173 80.9
Phvul.011G211400 Phaseolus vulgaris HOM05D006852 ORTHO05D008585 2.0e-77 293.9 169 82.8
Nn7g36210 Nelumbo nucifera HOM05D006852 ORTHO05D008585 3.3e-77 293.1 169 82.2
Cfa010769 Carpinus fangiana HOM05D006852 ORTHO05D008585 4.4e-77 292.7 168 83.3
Lalb_Chr03g0034091 Lupinus albus HOM05D006852 ORTHO05D008585 4.4e-77 292.7 169 84.6
Thecc.01G410400 Theobroma cacao HOM05D006852 ORTHO05D008585 4.4e-77 292.7 169 83.4
Eucgr.G03378 Eucalyptus grandis HOM05D006852 ORTHO05D008585 5.7e-77 292.4 169 83.4
HanXRQChr01g0015721 Helianthus annuus HOM05D006852 ORTHO05D008585 7.4e-77 292.0 187 73.3
Lsat_1_v5_gn_1_106940 Lactuca sativa HOM05D006852 ORTHO05D008585 7.4e-77 292.0 169 81.7
Gorai.004G172200 Gossypium raimondii HOM05D006852 ORTHO05D008585 1.3e-76 291.2 169 82.8
Atru.chr11.2623 Acer truncatum HOM05D006852 ORTHO05D008585 1.7e-76 290.8 169 84.0
QL04p006320 Quercus lobata HOM05D006852 ORTHO05D008585 2.2e-76 290.4 418 47.4
MELO3C023552.2 Cucumis melo HOM05D006852 ORTHO05D008585 3.7e-76 289.7 169 81.7
Duzib138G0005 Durio zibethinus HOM05D006852 ORTHO05D008585 3.7e-76 289.7 169 83.4
CAN.G857.11 Capsicum annuum HOM05D006852 ORTHO05D008585 4.8e-76 289.3 169 81.7
Oeu010800.1 Olea europaea HOM05D006852 ORTHO05D008585 4.8e-76 289.3 169 81.7
ClCG09G004140 Citrullus lanatus HOM05D006852 ORTHO05D008585 6.3e-76 288.9 169 81.1
CsaV3_7G031040 Cucumis sativus L. HOM05D006852 ORTHO05D008585 6.3e-76 288.9 172 80.2
CARHR221730 Cardamine hirsuta HOM05D006852 ORTHO05D008585 8.2e-76 288.5 169 81.7
Dinv09352 Davidia involucrata HOM05D006852 ORTHO05D008585 8.2e-76 288.5 168 83.3
Gohir.D08G165200 Gossypium hirsutum HOM05D006852 ORTHO05D008585 8.2e-76 288.5 169 82.2
EL10Ac2g04333 Beta vulgaris HOM05D006852 ORTHO05D008585 1.4e-75 287.7 169 82.2
Nitab4.5_0006579g0050 Nicotiana tabacum HOM05D006852 ORTHO05D008585 1.4e-75 287.7 169 79.9
Nitab4.5_0000125g0260 Nicotiana tabacum HOM05D006852 ORTHO05D008585 4.1e-75 286.2 169 79.9
AT4G15030 Arabidopsis thaliana HOM05D006852 ORTHO05D008585 5.3e-75 285.8 169 80.5
Psat4g148920 Pisum sativum HOM05D006852 ORTHO05D008585 5.3e-75 285.8 170 81.8
Actinidia31067 Actinidia chinensis HOM05D006852 ORTHO05D008585 6.9e-75 285.4 169 82.2
TWI79G0862 Tripterygium wilfordii HOM05D006852 ORTHO05D008585 6.9e-75 285.4 170 80.6
Sed0010309 Sechium edule HOM05D006852 ORTHO05D008585 1.2e-74 284.6 169 80.5
Solyc04g074660.3 Solanum lycopersicum HOM05D006852 ORTHO05D008585 2.0e-74 283.9 169 79.9
PSO384G4724 Papaver somniferum HOM05D006852 ORTHO05D008585 4.5e-74 282.7 169 79.9
Hma1.2p1_0293F.1_g116040 Hydrangea macrophylla HOM05D006852 ORTHO05D008585 5.9e-74 282.3 168 79.8
Sopen04g029630 Solanum pennellii HOM05D006852 ORTHO05D008585 5.9e-74 282.3 169 79.3
AL7G40800 Arabidopsis lyrata HOM05D006852 ORTHO05D008585 7.7e-74 282.0 169 79.3
PGSC0003DMG400030817 Solanum tuberosum HOM05D006852 ORTHO05D008585 7.7e-74 282.0 169 78.7
Peaxi162Scf00339g00115 Petunia axillaris HOM05D006852 ORTHO05D008585 1.0e-73 281.6 169 78.1
Carub.0007s2707 Capsella rubella HOM05D006852 ORTHO05D008585 1.3e-73 281.2 169 79.9
Medtr8g037265 Medicago truncatula HOM05D006852 ORTHO05D008585 1.3e-73 281.2 170 80.6
Thhalv10026084m.g Eutrema salsugineum HOM05D006852 ORTHO05D008585 1.7e-73 280.8 169 80.5
PGR031G2977 Punica granatum HOM05D006852 ORTHO05D008585 2.2e-73 280.4 169 79.3
PSO339G6046 Papaver somniferum HOM05D006852 ORTHO05D008585 2.9e-73 280.0 169 78.7
vmacro13669 Vaccinium macrocarpon HOM05D006852 ORTHO05D008585 2.9e-73 280.0 426 45.8
Sp7g13213 Schrenkiella parvula HOM05D006852 ORTHO05D008585 8.5e-73 278.5 169 78.7
BcaNung00310 Brassica carinata HOM05D006852 ORTHO05D008585 4.2e-72 276.2 169 78.7
THA.LOC104801980 Tarenaya hassleriana HOM05D006852 ORTHO05D008585 1.6e-71 274.2 169 78.1
Aqoxy1G00289 Aquilegia oxysepala HOM05D006852 ORTHO05D008585 2.7e-71 273.5 169 77.5
ATR0332G098 Amborella trichopoda HOM05D006852 ORTHO05D008585 3.6e-71 273.1 170 78.2
BcaC09g50182 Brassica carinata HOM05D006852 ORTHO05D008585 4.7e-71 272.7 169 77.5
Rhsim07G0056000 Rhododendron simsii HOM05D006852 ORTHO05D008585 7.9e-71 271.9 169 78.1
Aa31LG9G2320 Aethionema arabicum HOM05D006852 ORTHO05D008585 3.0e-70 270.0 197 68.0
AUR62023069 Chenopodium quinoa HOM05D006852 ORTHO05D008585 3.9e-70 269.6 200 67.0
arahy.Tifrunner.gnm1.ann1.2WG9D2 Arachis hypogaea HOM05D006852 ORTHO05D008585 6.7e-70 268.9 372 44.6
A01p22510 Brassica napus HOM05D006852 ORTHO05D008585 6.7e-70 268.9 169 76.3
C01p28040 Brassica napus HOM05D006852 ORTHO05D008585 6.7e-70 268.9 169 76.3
Zm00001eb115340 Zea mays HOM05D006852 ORTHO05D008585 1.1e-69 268.1 169 75.7
BolC1t02738H Brassica oleracea HOM05D006852 ORTHO05D008585 9.7e-69 265.0 169 75.1
SEGI_37436 Sequoiadendron giganteum HOM05D006852 ORTHO05D008585 2.8e-68 263.5 169 74.6
HPP92_009588 Vanilla planifolia HOM05D006852 ORTHO05D008585 2.8e-68 263.5 169 73.4
Os11g0639000 Oryza sativa ssp. japonica HOM05D006852 ORTHO05D008585 1.1e-67 261.5 168 73.2
Cc02_g28030 Coffea canephora HOM05D006852 ORTHO05D008585 2.4e-67 260.4 155 78.7
unitig_747.g22049 Utricularia gibba HOM05D006852 ORTHO05D008585 4.1e-67 259.6 172 72.7
VMungo1127G1814 Vigna mungo HOM05D006852 ORTHO05D008585 4.1e-67 259.6 153 79.7
Sc10g0000090 Simmondsia chinensis HOM05D006852 ORTHO05D008585 7.0e-67 258.8 150 83.3
TPR.G1866 Trifolium pratense HOM05D006852 ORTHO05D008585 7.0e-67 258.8 153 81.0
Sabra16G0163300 Salix brachista HOM05D006852 ORTHO05D008585 9.1e-67 258.5 194 68.0
Ah.10g038820 Amaranthus hybridus HOM05D006852 ORTHO05D008585 1.2e-66 258.1 206 64.6
BraA01t02166Z Brassica rapa HOM05D006852 ORTHO05D008585 1.2e-63 248.1 429 42.9
TAR633G0701 Trochodendron aralioides HOM05D006852 ORTHO05D008585 1.6e-63 247.7 145 78.6
AUR62009387 Chenopodium quinoa HOM05D006852 ORTHO05D008585 1.2e-61 241.5 175 69.1
Mapoly0009s0102 Marchantia polymorpha HOM05D006852 ORTHO05D008585 2.2e-60 237.3 168 67.3
SHI04066 Sapria himalayana HOM05D006852 ORTHO05D008585 6.3e-60 235.7 151 75.5
Pp3c2_10540 Physcomitrium patens HOM05D006852 ORTHO05D008585 5.3e-59 232.6 173 65.3
SGA_v2.0_scaffold161G37817 Striga asiatica HOM05D006852 ORTHO05D008585 3.8e-57 226.5 186 64.5
Hund18974 Selenicereus undatus HOM05D006852 ORTHO05D008585 5.5e-56 222.6 371 41.0
AagrBONN_evm.TU.Sc2ySwM_228.2602 Anthoceros agrestis HOM05D006852 ORTHO05D008585 1.2e-55 221.5 169 63.9
Hma1.2p1_0293F.1_g116050 Hydrangea macrophylla HOM05D006852 ORTHO05D008585 2.2e-52 210.7 125 79.2
CSS0019030 Camellia sinensis var. sinensis HOM05D006852 ORTHO05D008585 3.7e-52 209.9 175 64.6
CSS0037243 Camellia sinensis var. sinensis HOM05D006852 ORTHO05D008585 3.7e-52 209.9 175 64.6
Haze_03202 Corylus avellana HOM05D006852 ORTHO05D008585 6.3e-52 209.1 154 68.8
SalBow6G4338 Salvia bowleyana HOM05D006852 ORTHO05D008585 6.3e-52 209.1 166 62.0
MBI04_g36071_MAGBIO Magnolia biondii HOM05D006852 ORTHO05D008585 7.0e-51 205.7 169 63.9
SalBow6G3774 Salvia bowleyana HOM05D006852 ORTHO05D008585 1.6e-50 204.5 131 73.3
GSVIVG01032100001 Vitis vinifera HOM05D006852 ORTHO05D008585 3.5e-50 203.4 183 74.3
Cre07.g336250 Chlamydomonas reinhardtii HOM05D006852 ORTHO05D008585 6.1e-47 192.6 181 54.1
Oeu049501.1 Olea europaea HOM05D006852 ORTHO05D008585 6.3e-44 182.6 115 77.4
Migut.N01601 Erythranthe guttata HOM05D006852 ORTHO05D008585 2.1e-39 167.5 98 81.6
MD02G1310300 Malus domestica HOM05D006852 ORTHO05D008585 5.2e-38 162.9 145 62.1
SMO239G0058 Selaginella moellendorffii HOM05D006852 ORTHO05D008585 4.4e-37 159.8 103 69.9
CBR_g4609 Chara braunii HOM05D006852 ORTHO05D008585 8.3e-36 155.6 132 58.3
QL11p002033 Quercus lobata HOM05D006852 ORTHO05D008585 4.7e-31 139.8 107 66.4
CDE02G4017 Ceratophyllum demersum HOM05D006852 ORTHO05D008585 4.4e-29 133.3 81 76.5
QL11p002055 Quercus lobata HOM05D006852 ORTHO05D008585 4.4e-29 133.3 167 65.9
QL11p001483 Quercus lobata HOM05D000005 ORTHO05D000012 2.7e-26 124.0 112 58.0
C03p92530 Brassica napus HOM05D006852 ORTHO05D008585 3.6e-15 87.0 136 58.1
Cc02_g28050 Coffea canephora HOM05D006852 ORTHO05D008585 1.3e-09 68.6 101 57.4
CDE02G1038 Ceratophyllum demersum HOM05D005011 ORTHO05D006443 4.3e-08 63.5 39 71.8
Migut.N01602 Erythranthe guttata HOM05D006852 ORTHO05D008585 9.6e-08 62.4 33 81.8
Ca_23889_v3 Cicer arietinum L. HOM05D006852 ORTHO05D008585 1.4e-06 58.5 29 93.1


User provided reference genes

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