Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN01G0055 Fragaria x ananassa HOM05D006889 ORTHO05D008614 1.4e-188 662.9 361 100.0
FAN03G0535 Fragaria x ananassa HOM05D006889 ORTHO05D008614 9.3e-169 597.0 338 95.6
FAN10G1689 Fragaria x ananassa HOM05D006889 ORTHO05D008614 2.3e-167 592.4 338 95.9
FAN10G2743 Fragaria x ananassa HOM05D006889 ORTHO05D008614 8.7e-167 590.5 338 95.6
FvH4_7g33430 Fragaria vesca HOM05D006889 ORTHO05D008614 3.8e-162 575.1 338 95.9
RcHm_v2.0_Chr1g0383401 Rosa chinensis HOM05D006889 ORTHO05D008614 1.4e-151 540.0 339 87.6
Prupe.2G323000 Prunus persica HOM05D006889 ORTHO05D008614 3.2e-129 465.7 338 76.9
CSS0010313 Camellia sinensis var. sinensis HOM05D006889 ORTHO05D008614 1.5e-113 413.7 342 68.1
QL09p026702 Quercus lobata HOM05D006889 ORTHO05D008614 5.2e-111 405.2 339 67.6
Migut.F00816 Erythranthe guttata HOM05D006889 ORTHO05D008614 3.4e-110 402.5 329 68.4
Atru.chr12.2063 Acer truncatum HOM05D006889 ORTHO05D008614 6.4e-109 398.3 328 68.3
MD07G1304400 Malus domestica HOM05D006889 ORTHO05D008614 8.3e-109 397.9 338 68.6
Ciclev10012044m.g Citrus clementina HOM05D006889 ORTHO05D008614 5.4e-108 395.2 327 69.4
Eucgr.K00107 Eucalyptus grandis HOM05D006889 ORTHO05D008614 5.4e-108 395.2 338 66.6
Dinv25463 Davidia involucrata HOM05D006889 ORTHO05D008614 1.2e-107 394.0 326 67.2
TAR369G0178 Trochodendron aralioides HOM05D006889 ORTHO05D008614 2.0e-107 393.3 335 66.9
Gorai.010G175600 Gossypium raimondii HOM05D006889 ORTHO05D008614 7.8e-107 391.3 338 66.6
Gohir.A06G144633 Gossypium hirsutum HOM05D006889 ORTHO05D008614 3.0e-106 389.4 338 66.3
Thecc.06G017600 Theobroma cacao HOM05D006889 ORTHO05D008614 3.0e-106 389.4 330 67.6
CiPaw.07G182100 Carya illinoinensis HOM05D006889 ORTHO05D008614 8.6e-106 387.9 333 67.9
Manes.09G119000 Manihot esculenta HOM05D006889 ORTHO05D008614 1.6e-104 383.6 340 66.2
GSVIVG01024467001 Vitis vinifera HOM05D006889 ORTHO05D008614 1.5e-102 377.1 327 64.8
AL4G32960 Arabidopsis lyrata HOM05D006889 ORTHO05D008614 3.4e-102 375.9 343 65.3
Aa31LG5G21960 Aethionema arabicum HOM05D006889 ORTHO05D008614 4.4e-102 375.6 341 63.0
Carub.0004s1859 Capsella rubella HOM05D006889 ORTHO05D008614 5.8e-102 375.2 333 63.4
Lalb_Chr13g0293181 Lupinus albus HOM05D006889 ORTHO05D008614 1.3e-101 374.0 337 63.8
Potri.001G412800 Populus trichocarpa HOM05D006889 ORTHO05D008614 1.3e-101 374.0 339 64.6
Haze_22241 Corylus avellana HOM05D006889 ORTHO05D008614 1.7e-101 373.6 339 65.2
AT2G36740 Arabidopsis thaliana HOM05D006889 ORTHO05D008614 2.9e-101 372.9 343 63.8
TWI60G1635 Tripterygium wilfordii HOM05D006889 ORTHO05D008614 2.9e-101 372.9 339 63.1
Oeu033252.2 Olea europaea HOM05D006889 ORTHO05D008614 1.9e-100 370.2 377 59.9
Cc02_g09110 Coffea canephora HOM05D006889 ORTHO05D008614 1.0e-98 364.4 338 64.8
THA.LOC104805469 Tarenaya hassleriana HOM05D006889 ORTHO05D008614 1.3e-98 364.0 342 61.7
Lj4g0013326 Lotus japonicus HOM05D006889 ORTHO05D008614 3.0e-98 362.8 333 63.1
Solyc04g009830.3 Solanum lycopersicum HOM05D006889 ORTHO05D008614 1.5e-97 360.5 338 60.4
Sopen04g004970 Solanum pennellii HOM05D006889 ORTHO05D008614 9.5e-97 357.8 339 60.5
PSO384G0326 Papaver somniferum HOM05D006889 ORTHO05D008614 6.2e-96 355.1 350 59.1
Aqoxy4G02722 Aquilegia oxysepala HOM05D006889 ORTHO05D008614 5.2e-95 352.1 334 60.8
ECA238G0057 Erigeron canadensis HOM05D006889 ORTHO05D008614 6.8e-95 351.7 354 57.9
Nn6g34807 Nelumbo nucifera HOM05D006889 ORTHO05D008614 6.8e-95 351.7 348 60.9
BolC4t22783H Brassica oleracea HOM05D006889 ORTHO05D008614 1.2e-94 350.9 327 62.7
vmacro10779 Vaccinium macrocarpon HOM05D006889 ORTHO05D008614 1.2e-94 350.9 348 60.9
A05p09120 Brassica napus HOM05D006889 ORTHO05D008614 3.4e-94 349.4 329 62.3
BraA05t19868Z Brassica rapa HOM05D006889 ORTHO05D008614 7.6e-94 348.2 329 62.0
BcaC02g11793 Brassica carinata HOM05D006889 ORTHO05D008614 9.9e-94 347.8 327 62.1
BolC4t22767H Brassica oleracea HOM05D006889 ORTHO05D008614 9.9e-94 347.8 327 62.1
Glyma.05G136000 Glycine max HOM05D006889 ORTHO05D008614 1.3e-93 347.4 330 60.6
Gohir.D06G150400 Gossypium hirsutum HOM05D006889 ORTHO05D008614 2.9e-93 346.3 288 67.4
PSO339G0304 Papaver somniferum HOM05D006889 ORTHO05D008614 6.4e-93 345.1 350 61.1
C04p11290 Brassica napus HOM05D006889 ORTHO05D008614 8.4e-93 344.7 327 61.8
BcaB02g09334 Brassica carinata HOM05D006889 ORTHO05D008614 1.9e-92 343.6 332 62.7
CDE08G0956 Ceratophyllum demersum HOM05D006889 ORTHO05D008614 3.2e-92 342.8 328 60.4
Cpa.g.sc140.53 Carica papaya HOM05D006889 ORTHO05D008614 7.1e-92 341.7 330 60.0
Ca_18207_v3 Cicer arietinum L. HOM05D006889 ORTHO05D008614 9.2e-92 341.3 328 60.1
SalBow3G4178 Salvia bowleyana HOM05D006889 ORTHO05D008614 1.6e-91 340.5 346 58.4
PGSC0003DMG400025437 Solanum tuberosum HOM05D006889 ORTHO05D008614 2.1e-91 340.1 358 56.4
Phvul.002G186100 Phaseolus vulgaris HOM05D006889 ORTHO05D008614 3.5e-91 339.3 332 61.4
MD07G1075300 Malus domestica HOM05D006889 ORTHO05D008614 7.8e-91 338.2 357 59.9
Sabra16G0274900 Salix brachista HOM05D006889 ORTHO05D008614 2.3e-90 336.7 356 58.1
Hma1.2p1_0164F.1_g073300 Hydrangea macrophylla HOM05D006889 ORTHO05D008614 1.9e-89 333.6 275 68.7
CsaV3_5G005080 Cucumis sativus L. HOM05D006889 ORTHO05D008614 2.5e-89 333.2 326 59.2
HanXRQChr07g0200571 Helianthus annuus HOM05D006889 ORTHO05D008614 7.3e-89 331.6 344 57.3
Sabra16G0274600 Salix brachista HOM05D006889 ORTHO05D008614 1.8e-87 327.0 384 55.2
Actinidia31405 Actinidia chinensis HOM05D006889 ORTHO05D008614 3.1e-87 326.2 293 64.5
Sed0014561 Sechium edule HOM05D006889 ORTHO05D008614 3.1e-87 326.2 338 59.8
Psat7g087400 Pisum sativum HOM05D006889 ORTHO05D008614 2.6e-86 323.2 330 60.9
SGA_v2.0_scaffold62G21307 Striga asiatica HOM05D006889 ORTHO05D008614 4.4e-86 322.4 368 54.6
Sp4g19020 Schrenkiella parvula HOM05D006889 ORTHO05D008614 4.9e-85 318.9 329 59.6
Thhalv10016833m.g Eutrema salsugineum HOM05D006889 ORTHO05D008614 1.9e-84 317.0 337 58.8
HPP92_000052 Vanilla planifolia HOM05D006889 ORTHO05D008614 6.0e-83 312.0 329 57.8
Hund18033 Selenicereus undatus HOM05D006889 ORTHO05D008614 3.9e-82 309.3 352 54.8
MSTRG.4328 Avicennia marina HOM05D006889 ORTHO05D008614 6.6e-82 308.5 339 59.6
Os08g0192400 Oryza sativa ssp. japonica HOM05D006889 ORTHO05D008614 8.7e-82 308.1 338 56.8
arahy.Tifrunner.gnm1.ann1.T52I9D Arachis hypogaea HOM05D006889 ORTHO05D008614 1.9e-81 307.0 347 59.9
PGR142G0052 Punica granatum HOM05D006889 ORTHO05D008614 3.3e-81 306.2 344 57.8
MBI14_g11688_MAGBIO Magnolia biondii HOM05D006889 ORTHO05D008614 5.3e-79 298.9 339 56.3
Nitab4.5_0002651g0040 Nicotiana tabacum HOM05D006889 ORTHO05D008614 1.5e-78 297.4 336 55.4
CARHR131100 Cardamine hirsuta HOM05D006889 ORTHO05D008614 1.7e-77 293.9 332 56.9
Ah.14g084260 Amaranthus hybridus HOM05D006889 ORTHO05D008614 1.9e-76 290.4 332 51.8
arahy.Tifrunner.gnm1.ann1.I4BD9U Arachis hypogaea HOM05D006889 ORTHO05D008614 1.9e-76 290.4 376 54.0
ATR0081G022 Amborella trichopoda HOM05D006889 ORTHO05D008614 3.2e-76 289.7 277 62.1
unitig_747.g21800 Utricularia gibba HOM05D006889 ORTHO05D008614 3.2e-76 289.7 338 53.6
CAN.G186.71 Capsicum annuum HOM05D006889 ORTHO05D008614 9.3e-76 288.1 327 54.1
Sc08g0005450 Simmondsia chinensis HOM05D006889 ORTHO05D008614 8.1e-72 275.0 278 60.4
Zm00001eb260210 Zea mays HOM05D006889 ORTHO05D008614 1.1e-71 274.6 340 50.3
Nitab4.5_0000930g0060 Nicotiana tabacum HOM05D006889 ORTHO05D008614 1.3e-69 267.7 338 54.4
EL10Ac8g18884 Beta vulgaris HOM05D006889 ORTHO05D008614 1.6e-67 260.8 383 50.4
Peaxi162Scf00135g00913 Petunia axillaris HOM05D006889 ORTHO05D008614 1.3e-64 251.1 309 50.5
Rhsim09G0213900 Rhododendron simsii HOM05D006889 ORTHO05D008614 1.8e-63 247.3 360 48.1
Rhsim01G0067600 Rhododendron simsii HOM05D006889 ORTHO05D008614 8.4e-61 238.4 353 47.3
Lsat_1_v5_gn_2_107601 Lactuca sativa HOM05D006889 ORTHO05D008614 7.1e-60 235.3 339 48.4
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 1.6e-56 224.2 324 45.1
MELO3C005447.2 Cucumis melo HOM05D006889 ORTHO05D008614 3.7e-56 223.0 245 57.1
Pp3c14_17650 Physcomitrium patens HOM05D006889 ORTHO05D008614 1.9e-52 210.7 301 45.8
SMO165G0047 Selaginella moellendorffii HOM05D006889 ORTHO05D008614 5.5e-52 209.1 279 52.7
DCAR_030020 Daucus carota HOM05D006889 ORTHO05D008614 5.1e-50 202.6 274 46.7
TPR.G11931 Trifolium pratense HOM05D006889 ORTHO05D008614 8.2e-48 195.3 330 46.4
SEGI_10499 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 2.4e-47 193.7 256 48.8
AUR62028393 Chenopodium quinoa HOM05D006889 ORTHO05D008614 3.4e-46 189.9 389 40.1
AUR62039766 Chenopodium quinoa HOM05D006889 ORTHO05D008614 3.4e-46 189.9 239 56.9
COL.COLO4_31129 Corchorus olitorius HOM05D000112 ORTHO05D000564 3.4e-46 189.9 302 44.4
Mapoly0001s0482 Marchantia polymorpha HOM05D006889 ORTHO05D008614 3.4e-46 189.9 212 49.5
CBR_g38961 Chara braunii HOM05D006889 ORTHO05D008614 3.0e-42 176.8 336 38.7
SEGI_12666 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 5.3e-39 166.0 148 56.1
Gohir.D08G083500 Gossypium hirsutum HOM05D006889 ORTHO05D008614 3.4e-38 163.3 151 64.9
TPR.G8913 Trifolium pratense HOM05D006889 ORTHO05D008614 1.0e-37 161.8 115 75.7
Gorai.004G087700 Gossypium raimondii HOM05D006889 ORTHO05D008614 3.9e-34 149.8 174 56.9
FAN28G2910 Fragaria x ananassa HOM05D006889 ORTHO05D008614 4.0e-26 123.2 117 65.8
TPR.G34755 Trifolium pratense HOM05D006889 ORTHO05D008614 1.2e-19 101.7 62 83.9
SHI02511 Sapria himalayana HOM05D006889 ORTHO05D008614 2.1e-19 100.9 68 79.4
Gorai.005G015000 Gossypium raimondii HOM05D004753 ORTHO05D005920 3.4e-17 93.6 102 57.8
Gohir.D02G011800 Gossypium hirsutum HOM05D004753 ORTHO05D005920 4.4e-17 93.2 102 57.8
ClCG01G004860 Citrullus lanatus HOM05D006889 ORTHO05D008614 7.0e-15 85.9 176 40.9
MCO15G439 Micromonas commoda HOM05D006889 ORTHO05D008614 3.8e-13 80.1 291 31.3
Cre17.g728200 Chlamydomonas reinhardtii HOM05D006889 ORTHO05D008614 1.6e-11 74.7 289 32.5
SHI02510 Sapria himalayana HOM05D006889 ORTHO05D008614 1.0e-10 72.0 36 88.9
SHI02512 Sapria himalayana HOM05D006889 ORTHO05D008614 3.4e-09 67.0 91 49.5
Gohir.D04G081932 Gossypium hirsutum HOM05D004753 ORTHO05D005920 2.2e-08 64.3 70 55.7
Cfa024449 Carpinus fangiana HOM05D006889 ORTHO05D008614 4.1e-07 60.1 70 45.7
PRCOL_00000609 Prasinoderma coloniale HOM05D006889 ORTHO05D008614 7.8e-06 55.8 280 26.8


User provided reference genes

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