Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
FAN01G0010 Fragaria x ananassa HOM05D008847 ORTHO05D000368 3.7e-263 911.0 452 100.0
FAN06G2140 Fragaria x ananassa HOM05D008847 ORTHO05D000368 5.9e-128 461.8 355 73.8
FAN03G0347 Fragaria x ananassa HOM05D008847 ORTHO05D000368 5.3e-121 438.7 355 71.5
FAN05G2544 Fragaria x ananassa HOM05D008847 ORTHO05D016304 1.8e-76 290.8 393 49.9
FAN06G3184 Fragaria x ananassa HOM05D008847 ORTHO05D000368 8.9e-76 288.5 215 72.6
FvH4_7g25361 Fragaria vesca HOM05D008847 ORTHO05D000368 3.7e-74 283.1 399 47.9
FAN06G2118 Fragaria x ananassa HOM05D008847 ORTHO05D016304 8.3e-74 282.0 392 48.2
FvH4_6g44020 Fragaria vesca HOM05D008847 ORTHO05D000368 1.1e-73 281.6 387 49.4
FAN10G0027 Fragaria x ananassa HOM05D008847 ORTHO05D000368 2.6e-67 260.4 250 57.2
FAN03G1143 Fragaria x ananassa HOM05D008847 ORTHO05D000368 1.9e-46 191.0 357 40.1
RcHm_v2.0_Chr3g0476161 Rosa chinensis HOM05D000576 ORTHO05D000368 2.7e-40 170.6 398 35.9
RcHm_v2.0_Chr2g0167641 Rosa chinensis HOM05D000576 ORTHO05D000368 1.6e-37 161.4 358 37.4
RcHm_v2.0_Chr5g0008761 Rosa chinensis HOM05D008847 ORTHO05D045484 3.1e-36 157.1 397 36.0
FAN06G5009 Fragaria x ananassa HOM05D000576 ORTHO05D000368 3.4e-35 153.7 353 38.5
FvH4_6g47821 Fragaria vesca HOM05D000576 ORTHO05D000368 7.6e-35 152.5 335 37.6
FvH4_7g27481 Fragaria vesca HOM05D008847 ORTHO05D000368 3.8e-34 150.2 355 38.3
RcHm_v2.0_Chr2g0167551 Rosa chinensis HOM05D000576 ORTHO05D000368 1.4e-33 148.3 334 35.0
RcHm_v2.0_Chr5g0047501 Rosa chinensis HOM05D008847 ORTHO05D000368 4.2e-33 146.7 403 34.2
FvH4_6g44041 Fragaria vesca HOM05D008847 ORTHO05D000368 4.6e-32 143.3 265 42.6
RcHm_v2.0_Chr2g0167601 Rosa chinensis HOM05D000576 ORTHO05D000368 7.9e-32 142.5 276 40.6
Prupe.3G259800 Prunus persica HOM05D000576 ORTHO05D000368 3.0e-31 140.6 410 34.4
FAN09G3608 Fragaria x ananassa HOM05D000576 ORTHO05D000368 3.9e-31 140.2 336 35.1
FAN14G3739 Fragaria x ananassa HOM05D000576 ORTHO05D000368 5.1e-31 139.8 335 36.1
RcHm_v2.0_Chr2g0168251 Rosa chinensis HOM05D000576 ORTHO05D000368 7.4e-30 136.0 379 31.9
FAN05G2407 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.3e-29 135.2 345 34.5
FAN06G1177 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.6e-29 134.8 384 34.4
RcHm_v2.0_Chr2g0166621 Rosa chinensis HOM05D000576 ORTHO05D000368 4.8e-29 133.3 343 34.1
FAN09G4808 Fragaria x ananassa HOM05D008847 ORTHO05D000368 2.4e-28 131.0 263 38.8
FAN06G2289 Fragaria x ananassa HOM05D000576 ORTHO05D000368 3.1e-28 130.6 362 35.6
FAN06G0982 Fragaria x ananassa HOM05D000576 ORTHO05D000368 4.0e-28 130.2 362 35.4
FAN10G0882 Fragaria x ananassa HOM05D000576 ORTHO05D000368 6.9e-28 129.4 362 34.8
FAN14G2376 Fragaria x ananassa HOM05D000576 ORTHO05D000368 9.0e-28 129.0 300 38.7
FAN10G2125 Fragaria x ananassa HOM05D008847 ORTHO05D000368 1.2e-27 128.6 278 38.5
FAN14G0812 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.3e-26 125.2 352 36.4
FAN05G3417 Fragaria x ananassa HOM05D008847 ORTHO05D000368 5.5e-25 119.8 266 38.3
FAN01G2751 Fragaria x ananassa HOM05D008847 ORTHO05D000368 2.1e-24 117.9 275 37.5
Prupe.3G259300 Prunus persica HOM05D008847 ORTHO05D000368 2.1e-24 117.9 256 37.9
FvH4_3g09170 Fragaria vesca HOM05D008847 ORTHO05D016304 2.3e-23 114.4 158 46.8
FAN03G0578 Fragaria x ananassa HOM05D008847 ORTHO05D000368 1.5e-22 111.7 272 35.7
CSS0031751 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 3.1e-20 104.0 340 31.2
FvH4_6g48151 Fragaria vesca HOM05D000576 ORTHO05D000368 4.5e-19 100.1 296 34.1
Sabra17G0081300 Salix brachista HOM05D000576 ORTHO05D000368 1.3e-18 98.6 372 29.0
FvH4_6g48330 Fragaria vesca HOM05D008847 ORTHO05D000368 6.5e-18 96.3 174 37.9
Potri.017G092301 Populus trichocarpa HOM05D008175 ORTHO05D000368 9.4e-17 92.4 284 31.0
FvH4_6g44050 Fragaria vesca HOM05D008847 ORTHO05D016304 1.2e-16 92.0 73 58.9
FAN01G0602 Fragaria x ananassa HOM05D008847 ORTHO05D000368 3.6e-16 90.5 182 43.4
FAN25G2043 Fragaria x ananassa HOM05D000477 ORTHO05D000338 1.8e-15 88.2 83 60.2
FAN10G2699 Fragaria x ananassa HOM05D008847 ORTHO05D016304 2.3e-15 87.8 70 61.4
FAN14G4345 Fragaria x ananassa HOM05D008847 ORTHO05D000368 3.0e-15 87.4 155 38.1
FAN16G3623 Fragaria x ananassa HOM05D008847 ORTHO05D016304 5.1e-15 86.7 128 45.3
FvH4_6g48431 Fragaria vesca HOM05D008847 ORTHO05D000368 2.0e-14 84.7 136 41.2
FAN21G2927 Fragaria x ananassa HOM05D008847 ORTHO05D016304 2.0e-14 84.7 76 57.9
TPR.G9274 Trifolium pratense HOM05D009500 ORTHO05D000368 2.2e-13 81.3 351 26.8
FAN15G1135 Fragaria x ananassa HOM05D008847 ORTHO05D000368 6.3e-13 79.7 90 47.8
TPR.G7001 Trifolium pratense HOM05D009500 ORTHO05D000368 8.2e-13 79.3 330 26.7
TAR629G0101 Trochodendron aralioides HOM05D000576 ORTHO05D000368 3.1e-12 77.4 353 30.3
Actinidia07081 Actinidia chinensis HOM05D000576 ORTHO05D000368 4.1e-12 77.0 290 29.3
FAN02G1311 Fragaria x ananassa HOM05D008847 ORTHO05D000368 4.1e-12 77.0 174 35.1
FAN05G3797 Fragaria x ananassa HOM05D000576 ORTHO05D000368 4.1e-12 77.0 282 34.4
TAR633G2125 Trochodendron aralioides HOM05D000576 ORTHO05D000368 5.3e-12 76.6 322 27.6
FAN09G3072 Fragaria x ananassa HOM05D001529 ORTHO05D000368 6.9e-12 76.3 207 30.9
FAN09G3162 Fragaria x ananassa HOM05D006084 ORTHO05D007449 6.9e-12 76.3 231 37.7
TPR.G6942 Trifolium pratense HOM05D009500 ORTHO05D000368 1.2e-11 75.5 362 26.2
TAR633G1895 Trochodendron aralioides HOM05D000576 ORTHO05D000368 1.5e-11 75.1 324 28.4
CSS0035647 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 2.6e-11 74.3 360 26.7
FAN11G0895 Fragaria x ananassa HOM05D008847 ORTHO05D016304 3.4e-11 73.9 54 68.5
TPR.G6938 Trifolium pratense HOM05D009500 ORTHO05D000368 3.4e-11 73.9 366 23.5
FvH4_6g48180 Fragaria vesca HOM05D000576 ORTHO05D000368 1.3e-10 72.0 57 57.9
Dinv22832 Davidia involucrata HOM05D000576 ORTHO05D000368 3.8e-10 70.5 402 24.9
FAN14G2737 Fragaria x ananassa HOM05D000385 ORTHO05D000269 1.1e-09 68.9 255 30.6
Medtr7g116580 Medicago truncatula HOM05D009500 ORTHO05D000368 1.1e-09 68.9 368 25.8
FAN02G4373 Fragaria x ananassa HOM05D008847 ORTHO05D000368 1.9e-09 68.2 90 42.2
Dinv22828 Davidia involucrata HOM05D000576 ORTHO05D000368 2.5e-09 67.8 405 25.9
Dinv11451 Davidia involucrata HOM05D000576 ORTHO05D000368 9.4e-09 65.9 377 25.2
MD09G1063900 Malus domestica HOM05D000576 ORTHO05D000368 2.7e-08 64.3 198 38.4
FAN02G2714 Fragaria x ananassa HOM05D006084 ORTHO05D007449 6.1e-08 63.2 204 35.8
Psat3g004120 Pisum sativum HOM05D009500 ORTHO05D000368 6.1e-08 63.2 295 24.7
TAR629G2683 Trochodendron aralioides HOM05D000576 ORTHO05D000368 6.1e-08 63.2 340 25.3
TPR.G4771 Trifolium pratense HOM05D009500 ORTHO05D000368 7.9e-08 62.8 361 23.3
Gorai.007G299300 Gossypium raimondii HOM05D000576 ORTHO05D000368 1.4e-07 62.0 256 27.3
QL08p044485 Quercus lobata HOM05D041869 ORTHO05D010403 1.4e-07 62.0 186 29.6
FAN11G0556 Fragaria x ananassa HOM05D008847 ORTHO05D016304 1.8e-07 61.6 76 51.3
Lj5A369G34 Lonicera japonica HOM05D000576 ORTHO05D000368 1.8e-07 61.6 355 24.5
MBI06_g04290_MAGBIO Magnolia biondii HOM05D000576 ORTHO05D000368 8.8e-07 59.3 343 26.2
Ca_09502_v3 Cicer arietinum L. HOM05D009500 ORTHO05D000368 1.1e-06 58.9 248 25.0
TAR365G0708 Trochodendron aralioides HOM05D000576 ORTHO05D000368 2.0e-06 58.2 335 26.3
FAN05G4147 Fragaria x ananassa HOM05D008847 ORTHO05D000368 2.6e-06 57.8 264 29.5
Medtr7g114090 Medicago truncatula HOM05D009500 ORTHO05D000368 2.6e-06 57.8 349 26.1
RhsimUnG0214200 Rhododendron simsii HOM05D000576 ORTHO05D000368 3.3e-06 57.4 367 24.5
TPR.G4702 Trifolium pratense HOM05D009500 ORTHO05D000368 3.3e-06 57.4 360 23.9
Gohir.D11G277150 Gossypium hirsutum HOM05D000576 ORTHO05D000368 5.7e-06 56.6 249 26.5
COL.COLO4_31584 Corchorus olitorius HOM05D006195 ORTHO05D007710 7.4e-06 56.2 334 25.1
COL.COLO4_23025 Corchorus olitorius HOM05D000576 ORTHO05D000368 9.7e-06 55.8 319 23.2


User provided reference genes

Program Settings