Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L03705 Eucalyptus grandis HOM05D005285 ORTHO05D006829 3.0e-93 345.1 168 100.0
Eucgr.J01253 Eucalyptus grandis HOM05D005285 ORTHO05D006829 2.4e-90 335.5 182 92.3
Eucgr.J01256 Eucalyptus grandis HOM05D005285 ORTHO05D006829 2.4e-90 335.5 182 92.3
Eucgr.J01254 Eucalyptus grandis HOM05D005285 ORTHO05D006829 3.1e-90 335.1 182 91.8
Eucgr.J01257 Eucalyptus grandis HOM05D005285 ORTHO05D006829 2.1e-86 322.4 182 87.9
Cfa010729 Carpinus fangiana HOM05D005285 ORTHO05D006829 2.4e-82 308.9 178 83.7
Haze_03242 Corylus avellana HOM05D005285 ORTHO05D006829 2.4e-82 308.9 178 83.7
Manes.10G147800 Manihot esculenta HOM05D005285 ORTHO05D006829 2.4e-82 308.9 182 82.4
Gohir.A08G026900 Gossypium hirsutum HOM05D005285 ORTHO05D006829 2.0e-81 305.8 182 80.8
Ciclev10031943m.g Citrus clementina HOM05D005285 ORTHO05D006829 2.6e-81 305.4 182 80.2
Thecc.01G414500 Theobroma cacao HOM05D005285 ORTHO05D006829 2.6e-81 305.4 181 81.2
Potri.001G271100 Populus trichocarpa HOM05D005285 ORTHO05D006829 7.6e-81 303.9 182 81.3
CANSAT21G0587 Cannabis sativa HOM05D005285 ORTHO05D006829 9.9e-81 303.5 182 81.3
CSS0013341 Camellia sinensis var. sinensis HOM05D005285 ORTHO05D006829 2.2e-80 302.4 180 80.6
GSVIVG01032048001 Vitis vinifera HOM05D005285 ORTHO05D006829 3.8e-80 301.6 180 80.0
Glyma.12G239400 Glycine max HOM05D005285 ORTHO05D006829 4.9e-80 301.2 178 79.8
Gorai.004G035700 Gossypium raimondii HOM05D005285 ORTHO05D006829 4.9e-80 301.2 182 79.1
Dinv09380 Davidia involucrata HOM05D005285 ORTHO05D006829 6.4e-80 300.8 179 79.9
Rhsim01G0131200 Rhododendron simsii HOM05D005285 ORTHO05D006829 1.1e-79 300.1 180 79.4
QL04p004838 Quercus lobata HOM05D005285 ORTHO05D006829 1.4e-79 299.7 180 80.0
Duzib268G1126 Durio zibethinus HOM05D005285 ORTHO05D006829 1.9e-79 299.3 182 79.7
Gohir.D08G037700 Gossypium hirsutum HOM05D005285 ORTHO05D006829 2.4e-79 298.9 182 78.6
PGR044G0372 Punica granatum HOM05D005285 ORTHO05D006829 2.4e-79 298.9 182 81.3
TWI09G0675 Tripterygium wilfordii HOM05D005285 ORTHO05D006829 2.4e-79 298.9 182 79.7
VMungo1127G2059 Vigna mungo HOM05D005285 ORTHO05D006829 2.4e-79 298.9 178 80.3
Hma1.2p1_1011F.1_g247500 Hydrangea macrophylla HOM05D005285 ORTHO05D006829 3.2e-79 298.5 180 79.4
EL10Ac2g04308 Beta vulgaris HOM05D005285 ORTHO05D006829 4.2e-79 298.1 181 78.5
Phvul.011G213800 Phaseolus vulgaris HOM05D005285 ORTHO05D006829 5.5e-79 297.7 178 79.2
RcHm_v2.0_Chr1g0314801 Rosa chinensis HOM05D005285 ORTHO05D006829 5.5e-79 297.7 180 80.0
TWI53G0546 Tripterygium wilfordii HOM05D005285 ORTHO05D006829 7.1e-79 297.4 182 79.1
Actinidia20684 Actinidia chinensis HOM05D005285 ORTHO05D006829 9.3e-79 297.0 180 78.9
FvH4_7g00610 Fragaria vesca HOM05D005285 ORTHO05D006829 9.3e-79 297.0 180 79.4
FAN06G0391 Fragaria x ananassa HOM05D005285 ORTHO05D006829 9.3e-79 297.0 180 79.4
FAN10G3755 Fragaria x ananassa HOM05D005285 ORTHO05D006829 9.3e-79 297.0 180 79.4
MD07G1005600 Malus domestica HOM05D005285 ORTHO05D006829 9.3e-79 297.0 178 79.8
Peaxi162Scf00042g00510 Petunia axillaris HOM05D005285 ORTHO05D006829 9.3e-79 297.0 179 78.8
FAN03G1002 Fragaria x ananassa HOM05D005285 ORTHO05D006829 1.2e-78 296.6 180 78.9
Lj9A629T99 Lonicera japonica HOM05D005285 ORTHO05D006829 1.6e-78 296.2 180 78.9
Prupe.2G008000 Prunus persica HOM05D005285 ORTHO05D006829 3.5e-78 295.0 180 80.6
SalBow5G3096 Salvia bowleyana HOM05D005285 ORTHO05D006829 4.6e-78 294.7 181 79.6
SalBow5G3836 Salvia bowleyana HOM05D005285 ORTHO05D006829 4.6e-78 294.7 181 79.6
Cpa.g.sc234.2 Carica papaya HOM05D005285 ORTHO05D006829 6.0e-78 294.3 181 78.5
Lsat_1_v5_gn_1_109141 Lactuca sativa HOM05D005285 ORTHO05D006829 6.0e-78 294.3 180 76.7
Oeu064272.1 Olea europaea HOM05D005285 ORTHO05D006829 6.0e-78 294.3 180 78.9
FAN01G1197 Fragaria x ananassa HOM05D005285 ORTHO05D006829 7.9e-78 293.9 180 78.9
MD02G1316300 Malus domestica HOM05D005285 ORTHO05D006829 7.9e-78 293.9 178 79.8
Lalb_Chr03g0033921 Lupinus albus HOM05D005285 ORTHO05D006829 1.0e-77 293.5 178 78.7
Medtr8g036165 Medicago truncatula HOM05D005285 ORTHO05D006829 1.3e-77 293.1 178 79.2
MBI04_g14265_MAGBIO Magnolia biondii HOM05D005285 ORTHO05D006829 2.3e-77 292.4 178 77.5
DCAR_029637 Daucus carota HOM05D005285 ORTHO05D006829 3.0e-77 292.0 179 77.7
PSO339G1127 Papaver somniferum HOM05D005285 ORTHO05D006829 3.0e-77 292.0 181 77.3
ClCG10G012540 Citrullus lanatus HOM05D005285 ORTHO05D006829 3.9e-77 291.6 181 77.9
Aqoxy2G00109 Aquilegia oxysepala HOM05D005285 ORTHO05D006829 5.1e-77 291.2 178 77.5
AUR62023050 Chenopodium quinoa HOM05D005285 ORTHO05D006829 6.7e-77 290.8 181 77.3
Nn7g36086 Nelumbo nucifera HOM05D005285 ORTHO05D006829 6.7e-77 290.8 182 76.9
Psat4g195080 Pisum sativum HOM05D005285 ORTHO05D006829 6.7e-77 290.8 176 79.0
MELO3C023957.2 Cucumis melo HOM05D005285 ORTHO05D006829 1.1e-76 290.0 181 77.9
CsaV3_3G032330 Cucumis sativus L. HOM05D005285 ORTHO05D006829 1.1e-76 290.0 181 78.5
PSO384G1382 Papaver somniferum HOM05D005285 ORTHO05D006829 1.1e-76 290.0 181 77.3
Cc02_g27470 Coffea canephora HOM05D005285 ORTHO05D006829 1.9e-76 289.3 180 78.9
arahy.Tifrunner.gnm1.ann1.DICK3U Arachis hypogaea HOM05D005285 ORTHO05D006829 2.5e-76 288.9 178 77.0
Sed0014745 Sechium edule HOM05D005285 ORTHO05D006829 2.5e-76 288.9 180 77.8
Prupe.2G008200 Prunus persica HOM05D005285 ORTHO05D006829 3.3e-76 288.5 180 78.3
Nitab4.5_0002012g0040 Nicotiana tabacum HOM05D005285 ORTHO05D006829 4.3e-76 288.1 176 77.8
Lj3g0011351 Lotus japonicus HOM05D005285 ORTHO05D006829 5.6e-76 287.7 178 77.5
ECA248G0026 Erigeron canadensis HOM05D005285 ORTHO05D006829 9.6e-76 287.0 180 75.6
Nitab4.5_0000050g0030 Nicotiana tabacum HOM05D005285 ORTHO05D006829 1.6e-75 286.2 175 77.7
Sopen10g011740 Solanum pennellii HOM05D005285 ORTHO05D006829 1.6e-75 286.2 179 77.1
TAR636G1692 Trochodendron aralioides HOM05D005285 ORTHO05D006829 1.6e-75 286.2 178 77.5
Ca_23856_v3 Cicer arietinum L. HOM05D005285 ORTHO05D006829 4.8e-75 284.6 178 76.4
vmacro21170 Vaccinium macrocarpon HOM05D005285 ORTHO05D006829 1.4e-74 283.1 228 63.2
AT5G48020 Arabidopsis thaliana HOM05D005285 ORTHO05D006829 1.8e-74 282.7 182 75.8
A06p39410 Brassica napus HOM05D005285 ORTHO05D006829 2.4e-74 282.3 182 75.8
BraA06t26856Z Brassica rapa HOM05D005285 ORTHO05D006829 2.4e-74 282.3 182 75.8
Migut.B01343 Erythranthe guttata HOM05D005285 ORTHO05D006829 4.0e-74 281.6 181 74.6
AL8G20280 Arabidopsis lyrata HOM05D005285 ORTHO05D006829 6.9e-74 280.8 182 75.8
COL.COLO4_23903 Corchorus olitorius HOM05D005285 ORTHO05D006829 6.9e-74 280.8 187 74.9
BcaC06g30830 Brassica carinata HOM05D005285 ORTHO05D006829 1.2e-73 280.0 182 75.3
Thhalv10004473m.g Eutrema salsugineum HOM05D005285 ORTHO05D006829 1.2e-73 280.0 182 75.3
Atru.chr11.2632 Acer truncatum HOM05D005285 ORTHO05D006829 1.5e-73 279.6 204 69.1
Oeu039102.1 Olea europaea HOM05D005285 ORTHO05D006829 1.5e-73 279.6 177 76.8
THA.LOC104819060 Tarenaya hassleriana HOM05D005285 ORTHO05D006829 2.0e-73 279.3 182 74.7
Carub.0008s0757 Capsella rubella HOM05D005285 ORTHO05D006829 5.8e-73 277.7 182 75.3
Aa31LG11G7560 Aethionema arabicum HOM05D005285 ORTHO05D006829 7.6e-73 277.3 182 74.2
CARHR184290 Cardamine hirsuta HOM05D005285 ORTHO05D006829 1.0e-72 276.9 182 74.2
Hund03676 Selenicereus undatus HOM05D005285 ORTHO05D006829 1.0e-72 276.9 178 75.8
MSTRG.20606 Avicennia marina HOM05D005285 ORTHO05D006829 1.3e-72 276.6 178 75.8
Zm00001eb189240 Zea mays HOM05D005285 ORTHO05D006829 1.3e-72 276.6 176 73.3
Sp2g18470 Schrenkiella parvula HOM05D005285 ORTHO05D006829 1.7e-72 276.2 182 74.2
Os02g0717500 Oryza sativa ssp. japonica HOM05D005285 ORTHO05D006829 2.2e-72 275.8 179 71.5
CDE04G1667 Ceratophyllum demersum HOM05D005285 ORTHO05D006829 2.9e-72 275.4 180 71.7
Sabra16G0166500 Salix brachista HOM05D005285 ORTHO05D006829 2.9e-72 275.4 226 63.7
SGA_v2.0_scaffold646G53323 Striga asiatica HOM05D005285 ORTHO05D006829 8.4e-72 273.9 177 76.3
C07p38860 Brassica napus HOM05D005285 ORTHO05D006829 1.1e-71 273.5 182 74.2
unitig_26.g9596 Utricularia gibba HOM05D005285 ORTHO05D006829 1.4e-71 273.1 182 73.1
BolC7t44405H Brassica oleracea HOM05D005285 ORTHO05D006829 3.2e-71 271.9 182 73.6
Hund03675 Selenicereus undatus HOM05D005285 ORTHO05D006829 4.2e-71 271.6 211 64.5
Lj9C629T1 Lonicera japonica HOM05D005285 ORTHO05D006829 2.1e-70 269.2 171 73.1
ATR0605G013 Amborella trichopoda HOM05D005285 ORTHO05D006829 4.6e-70 268.1 178 71.3
TPR.G21737 Trifolium pratense HOM05D005285 ORTHO05D006829 4.6e-70 268.1 148 82.4
Atru.chr11.2010 Acer truncatum HOM05D005285 ORTHO05D006829 2.3e-69 265.8 170 73.5
QL04p004868 Quercus lobata HOM05D005285 ORTHO05D006829 2.3e-69 265.8 176 72.7
QL04p004878 Quercus lobata HOM05D005285 ORTHO05D006829 2.3e-69 265.8 176 73.3
SGA_v2.0_scaffold646G53324 Striga asiatica HOM05D005285 ORTHO05D006829 5.1e-69 264.6 152 79.6
Solyc10g037960.3 Solanum lycopersicum HOM05D005285 ORTHO05D006829 1.1e-68 263.5 149 80.5
SEGI_06931 Sequoiadendron giganteum HOM05D005285 ORTHO05D006829 6.3e-67 257.7 175 70.3
FAN01G1198 Fragaria x ananassa HOM05D005285 ORTHO05D006829 8.2e-67 257.3 272 52.6
ECA248G2524 Erigeron canadensis HOM05D005285 ORTHO05D006829 1.8e-66 256.1 174 68.4
HanXRQChr01g0017351 Helianthus annuus HOM05D005285 ORTHO05D006829 2.4e-66 255.8 179 67.6
SHI04065 Sapria himalayana HOM05D000259 ORTHO05D000155 6.9e-66 254.2 231 57.1
QL04p004849 Quercus lobata HOM05D005285 ORTHO05D006829 1.5e-65 253.1 178 65.2
Lsat_1_v5_gn_1_111020 Lactuca sativa HOM05D005285 ORTHO05D006829 5.9e-65 251.1 179 67.0
HanXRQChr11g0330581 Helianthus annuus HOM05D005285 ORTHO05D006829 1.3e-64 250.0 179 65.4
ECA248G2079 Erigeron canadensis HOM05D005285 ORTHO05D006829 5.0e-64 248.1 176 67.0
AUR62009369 Chenopodium quinoa HOM05D005285 ORTHO05D006829 6.5e-64 247.7 153 78.4
HanXRQChr11g0330561 Helianthus annuus HOM05D005285 ORTHO05D006829 6.5e-64 247.7 174 66.7
Mapoly0019s0106 Marchantia polymorpha HOM05D005285 ORTHO05D006829 3.5e-62 241.9 178 64.6
AagrBONN_evm.TU.Sc2ySwM_228.3236 Anthoceros agrestis HOM05D005285 ORTHO05D006829 6.7e-61 237.7 179 63.7
SMO364G0792 Selaginella moellendorffii HOM05D005285 ORTHO05D006829 2.8e-59 232.3 175 62.3
Pp3c17_23530 Physcomitrium patens HOM05D005285 ORTHO05D006829 1.4e-58 229.9 178 62.9
Sed0008744 Sechium edule HOM05D005285 ORTHO05D006829 1.1e-55 220.3 163 69.9
Ca_24082_v3 Cicer arietinum L. HOM05D005285 ORTHO05D006829 3.4e-49 198.7 167 55.7
Lsat_1_v5_gn_1_72821 Lactuca sativa HOM05D005285 ORTHO05D006829 4.5e-41 171.8 151 58.9
Ca_24079_v3 Cicer arietinum L. HOM05D005285 ORTHO05D006829 7.7e-41 171.0 173 50.9
Peaxi162Scf00451g00621 Petunia axillaris HOM05D005285 ORTHO05D006829 1.7e-40 169.9 158 54.4
Cre13.g586400 Chlamydomonas reinhardtii HOM05D005285 ORTHO05D006829 5.0e-40 168.3 201 44.8
arahy.Tifrunner.gnm1.ann1.A7HRCY Arachis hypogaea HOM05D005285 ORTHO05D006829 2.3e-37 159.5 164 52.4
Actinidia21565 Actinidia chinensis HOM05D005285 ORTHO05D006829 5.2e-37 158.3 107 71.0
Oeu039103.1 Olea europaea HOM05D005285 ORTHO05D008854 3.7e-35 152.1 90 78.9
Sc11g0009350 Simmondsia chinensis HOM05D005285 ORTHO05D006829 5.9e-33 144.8 89 78.7
HPP92_022786 Vanilla planifolia HOM05D005285 ORTHO05D006829 5.5e-31 138.3 93 73.1
HanXRQChr11g0330601 Helianthus annuus HOM05D005285 ORTHO05D006829 4.1e-26 122.1 89 65.2
Pp3c14_26250 Physcomitrium patens HOM05D005285 ORTHO05D006829 1.3e-24 117.1 89 64.0
TPR.G13313 Trifolium pratense HOM05D005285 ORTHO05D413460 1.1e-18 97.4 77 61.0
arahy.Tifrunner.gnm1.ann1.J91U4H Arachis hypogaea HOM05D000001 ORTHO05D004533 1.4e-18 97.1 59 71.2
VMungo1127G1344 Vigna mungo HOM05D000839 ORTHO05D000664 2.9e-16 89.4 48 81.2
arahy.Tifrunner.gnm1.ann1.43BKZS Arachis hypogaea HOM05D000001 ORTHO05D000003 2.1e-14 83.2 47 76.6
CDE07G0090 Ceratophyllum demersum HOM05D000288 ORTHO05D000173 1.3e-08 63.9 46 63.0
TPR.G1074 Trifolium pratense HOM05D005285 ORTHO05D411165 8.6e-08 61.2 74 41.9


User provided reference genes

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