Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L03552 Eucalyptus grandis HOM05D002165 ORTHO05D001531 2.6e-39 164.9 79 100.0
Eucgr.H01323 Eucalyptus grandis HOM05D002165 ORTHO05D001531 4.2e-21 104.4 79 65.8
Eucgr.H01321 Eucalyptus grandis HOM05D002165 ORTHO05D001531 1.7e-19 99.0 74 66.2
Eucgr.H01327 Eucalyptus grandis HOM05D002165 ORTHO05D001531 4.3e-18 94.4 76 63.2
Eucgr.H01329 Eucalyptus grandis HOM05D002165 ORTHO05D001531 4.3e-18 94.4 76 63.2
Eucgr.H01326 Eucalyptus grandis HOM05D002165 ORTHO05D001531 5.6e-18 94.0 76 63.2
Eucgr.H01325 Eucalyptus grandis HOM05D002165 ORTHO05D001531 2.8e-17 91.7 76 61.8
Eucgr.H01330 Eucalyptus grandis HOM05D002165 ORTHO05D001531 3.6e-17 91.3 76 61.8
Eucgr.H01328 Eucalyptus grandis HOM05D002165 ORTHO05D001531 4.8e-17 90.9 76 61.8
Eucgr.H01324 Eucalyptus grandis HOM05D002165 ORTHO05D001531 1.1e-16 89.7 75 61.3
Eucgr.H01333 Eucalyptus grandis HOM05D002165 ORTHO05D001531 1.1e-16 89.7 76 61.8
Eucgr.H01331 Eucalyptus grandis HOM05D002165 ORTHO05D001531 1.8e-16 89.0 76 57.9
Eucgr.H01334 Eucalyptus grandis HOM05D002165 ORTHO05D001531 1.8e-16 89.0 76 61.8
Eucgr.H01332 Eucalyptus grandis HOM05D002165 ORTHO05D001531 1.5e-15 85.9 76 59.2
Eucgr.H01322 Eucalyptus grandis HOM05D002165 ORTHO05D001531 5.4e-13 77.4 76 55.3
Eucgr.L03553 Eucalyptus grandis HOM05D002165 ORTHO05D001531 5.4e-13 77.4 76 55.3
PGR083G0845 Punica granatum HOM05D002165 ORTHO05D001531 3.9e-11 71.2 79 45.6
Cc02_g35880 Coffea canephora HOM05D002165 ORTHO05D001531 2.8e-09 65.1 67 49.3
Prupe.6G304300 Prunus persica HOM05D002165 ORTHO05D001531 2.8e-09 65.1 76 47.4
Cpa.g.sc48.225 Carica papaya HOM05D002165 ORTHO05D001531 6.2e-09 63.9 78 50.0
RcHm_v2.0_Chr1g0321401 Rosa chinensis HOM05D002165 ORTHO05D001531 8.1e-09 63.5 75 41.3
TAR362G0276 Trochodendron aralioides HOM05D002165 ORTHO05D001531 1.1e-08 63.2 75 45.3
Dinv30951 Davidia involucrata HOM05D002165 ORTHO05D001531 1.4e-08 62.8 75 48.0
FAN05G4164 Fragaria x ananassa HOM05D002165 ORTHO05D001531 1.4e-08 62.8 75 42.7
Rhsim11G0104900 Rhododendron simsii HOM05D002165 ORTHO05D001531 1.4e-08 62.8 82 43.9
TAR633G1086 Trochodendron aralioides HOM05D002165 ORTHO05D001531 1.8e-08 62.4 75 45.3
FAN02G1676 Fragaria x ananassa HOM05D002165 ORTHO05D001531 3.1e-08 61.6 75 41.3
FAN09G0584 Fragaria x ananassa HOM05D002165 ORTHO05D001531 3.1e-08 61.6 75 41.3
Oeu061905.1 Olea europaea HOM05D002165 ORTHO05D001531 3.1e-08 61.6 72 50.0
Oeu062787.1 Olea europaea HOM05D002165 ORTHO05D001531 3.1e-08 61.6 71 54.9
Actinidia17737 Actinidia chinensis HOM05D002165 ORTHO05D001531 4.0e-08 61.2 77 46.8
Atru.chr12.1534 Acer truncatum HOM05D002165 ORTHO05D001531 6.9e-08 60.5 73 42.5
Atru.chr12.1536 Acer truncatum HOM05D002165 ORTHO05D001531 6.9e-08 60.5 73 42.5
Aqoxy5G02840 Aquilegia oxysepala HOM05D002165 ORTHO05D001531 9.0e-08 60.1 76 44.7
FvH4_6g08530 Fragaria vesca HOM05D002165 ORTHO05D001531 9.0e-08 60.1 75 41.3
FAN14G5435 Fragaria x ananassa HOM05D002165 ORTHO05D001531 9.0e-08 60.1 75 41.3
QL03p011025 Quercus lobata HOM05D016210 ORTHO05D001531 1.5e-07 59.3 63 42.9
Sed0022046 Sechium edule HOM05D002165 ORTHO05D001531 2.0e-07 58.9 78 43.6
CSS0004014 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 2.6e-07 58.5 71 43.7
Oeu000103.1 Olea europaea HOM05D008018 ORTHO05D001531 2.6e-07 58.5 72 45.8
Prupe.6G304200 Prunus persica HOM05D002165 ORTHO05D001531 4.5e-07 57.8 73 43.8
Sed0005500 Sechium edule HOM05D002165 ORTHO05D001531 4.5e-07 57.8 78 43.6
Ciclev10013222m.g Citrus clementina HOM05D002165 ORTHO05D001531 5.8e-07 57.4 78 46.2
RcHm_v2.0_Chr3g0458591 Rosa chinensis HOM05D002165 ORTHO05D001531 5.8e-07 57.4 77 40.3
THA.LOC104818754 Tarenaya hassleriana HOM05D002165 ORTHO05D001531 5.8e-07 57.4 76 43.4
CSS0027376 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 7.6e-07 57.0 65 43.1
CSS0044388 Camellia sinensis var. sinensis HOM05D002165 ORTHO05D001531 7.6e-07 57.0 67 43.3
MELO3C015240.2 Cucumis melo HOM05D002165 ORTHO05D001531 7.6e-07 57.0 86 39.5
QL03p011084 Quercus lobata HOM05D016210 ORTHO05D001531 7.6e-07 57.0 63 42.9
Aa31LG5G16230 Aethionema arabicum HOM05D002165 ORTHO05D001531 9.9e-07 56.6 77 48.1
CsaV3_1G038050 Cucumis sativus L. HOM05D002165 ORTHO05D001531 9.9e-07 56.6 86 39.5
Ciclev10013684m.g Citrus clementina HOM05D002165 ORTHO05D001531 2.9e-06 55.1 73 43.8
Sed0026735 Sechium edule HOM05D002165 ORTHO05D001531 2.9e-06 55.1 79 40.5
Ciclev10013220m.g Citrus clementina HOM05D002165 ORTHO05D001531 3.8e-06 54.7 78 44.9
MELO3C025020.2 Cucumis melo HOM05D002165 ORTHO05D001531 3.8e-06 54.7 82 41.5
DCAR_002291 Daucus carota HOM05D002165 ORTHO05D001531 4.9e-06 54.3 80 41.2
Nn3g21955 Nelumbo nucifera HOM05D002165 ORTHO05D001531 6.4e-06 53.9 84 40.5
ClCG00G002170 Citrullus lanatus HOM05D002165 ORTHO05D001531 8.4e-06 53.5 81 39.5
ClCG08G002310 Citrullus lanatus HOM05D002165 ORTHO05D001531 8.4e-06 53.5 81 39.5
ClCG08G002360 Citrullus lanatus HOM05D002165 ORTHO05D001531 8.4e-06 53.5 81 39.5
DCAR_001885 Daucus carota HOM05D002165 ORTHO05D001531 8.4e-06 53.5 80 40.0


User provided reference genes

Program Settings