Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L03507 Eucalyptus grandis HOM05D005734 ORTHO05D006990 7.5e-21 103.6 83 100.0
Eucgr.K02152 Eucalyptus grandis HOM05D005734 ORTHO05D006990 1.1e-19 99.8 82 65.9
Dinv33615 Davidia involucrata HOM05D005734 ORTHO05D006990 1.5e-13 79.3 82 54.9
MD02G1134200 Malus domestica HOM05D005734 ORTHO05D006990 3.7e-12 74.7 82 51.2
MD15G1247200 Malus domestica HOM05D005734 ORTHO05D006990 4.8e-12 74.3 82 51.2
TAR376G0390 Trochodendron aralioides HOM05D005734 ORTHO05D006990 4.8e-12 74.3 82 48.8
Rhsim08G0034500 Rhododendron simsii HOM05D005734 ORTHO05D006990 1.4e-11 72.8 83 53.0
Cc07_g10570 Coffea canephora HOM05D005734 ORTHO05D006990 2.4e-11 72.0 82 50.0
COL.COLO4_21933 Corchorus olitorius HOM05D005734 ORTHO05D006990 4.1e-11 71.2 83 54.2
Nitab4.5_0005721g0110 Nicotiana tabacum HOM05D005734 ORTHO05D006990 4.1e-11 71.2 82 48.8
QL06p033653 Quercus lobata HOM05D005734 ORTHO05D006990 4.1e-11 71.2 82 47.6
Duzib147G0754 Durio zibethinus HOM05D005734 ORTHO05D006990 5.4e-11 70.9 83 51.8
Lj2C466G2 Lonicera japonica HOM05D005734 ORTHO05D006990 5.4e-11 70.9 82 51.2
Nitab4.5_0004254g0030 Nicotiana tabacum HOM05D005734 ORTHO05D006990 5.4e-11 70.9 82 47.6
PSO210G7806 Papaver somniferum HOM05D005734 ORTHO05D006990 5.4e-11 70.9 83 50.6
VMungo1215G0268 Vigna mungo HOM05D005734 ORTHO05D006990 5.4e-11 70.9 82 48.8
TWI09G0878 Tripterygium wilfordii HOM05D005734 ORTHO05D006990 7.0e-11 70.5 82 48.8
Solyc02g084220.3 Solanum lycopersicum HOM05D005734 ORTHO05D006990 9.1e-11 70.1 82 47.6
Sopen02g028960 Solanum pennellii HOM05D005734 ORTHO05D006990 9.1e-11 70.1 82 47.6
Thecc.01G021200 Theobroma cacao HOM05D005734 ORTHO05D006990 9.1e-11 70.1 83 51.8
Ca_24908_v3 Cicer arietinum L. HOM05D005734 ORTHO05D006990 1.6e-10 69.3 82 47.6
CSS0031169 Camellia sinensis var. sinensis HOM05D005734 ORTHO05D006990 2.0e-10 68.9 83 49.4
Actinidia31004 Actinidia chinensis HOM05D005734 ORTHO05D006990 2.7e-10 68.6 83 53.0
PSO170G3799 Papaver somniferum HOM05D005734 ORTHO05D006990 2.7e-10 68.6 83 49.4
Ah.03g141620 Amaranthus hybridus HOM05D005734 ORTHO05D006990 3.5e-10 68.2 82 52.4
Lalb_Chr16g0391171 Lupinus albus HOM05D005734 ORTHO05D006990 3.5e-10 68.2 82 48.8
Prupe.7G166600 Prunus persica HOM05D005734 ORTHO05D006990 3.5e-10 68.2 82 80.5
Sabra07G0011400 Salix brachista HOM05D005734 ORTHO05D006990 4.5e-10 67.8 83 48.2
Glyma.11G075600 Glycine max HOM05D005734 ORTHO05D006990 5.9e-10 67.4 82 46.3
Phvul.002G110400 Phaseolus vulgaris HOM05D005734 ORTHO05D006990 5.9e-10 67.4 82 46.3
Glyma.01G167600 Glycine max HOM05D005734 ORTHO05D006990 7.7e-10 67.0 82 45.1
Nn6g32291 Nelumbo nucifera HOM05D005734 ORTHO05D006990 7.7e-10 67.0 82 45.1
TWI73G0895 Tripterygium wilfordii HOM05D005734 ORTHO05D006990 7.7e-10 67.0 83 48.2
TAR628G0339 Trochodendron aralioides HOM05D005734 ORTHO05D006990 7.7e-10 67.0 82 45.1
FAN26G0019 Fragaria x ananassa HOM05D005734 ORTHO05D006990 1.0e-09 66.6 83 72.3
TPR.G2344 Trifolium pratense HOM05D005734 ORTHO05D006990 1.0e-09 66.6 82 45.1
MSTRG.2698 Avicennia marina HOM05D005734 ORTHO05D006990 1.3e-09 66.2 82 47.6
Ciclev10026469m.g Citrus clementina HOM05D005734 ORTHO05D006990 1.3e-09 66.2 85 48.2
RcHm_v2.0_Chr2g0099641 Rosa chinensis HOM05D005734 ORTHO05D006990 1.3e-09 66.2 83 47.0
Sabra05G0095300 Salix brachista HOM05D005734 ORTHO05D006990 1.3e-09 66.2 83 47.0
GSVIVG01018804001 Vitis vinifera HOM05D005734 ORTHO05D006990 1.7e-09 65.9 82 59.8
FAN28G1963 Fragaria x ananassa HOM05D005734 ORTHO05D006990 2.2e-09 65.5 83 45.8
Peaxi162Scf00083g00086 Petunia axillaris HOM05D005734 ORTHO05D006990 2.2e-09 65.5 82 45.1
Migut.H01144 Erythranthe guttata HOM05D005734 ORTHO05D006990 2.9e-09 65.1 81 44.4
Gohir.D03G010200 Gossypium hirsutum HOM05D005734 ORTHO05D006990 2.9e-09 65.1 83 48.2
Gorai.003G010600 Gossypium raimondii HOM05D005734 ORTHO05D006990 2.9e-09 65.1 83 48.2
Potri.005G116300 Populus trichocarpa HOM05D005734 ORTHO05D006990 2.9e-09 65.1 83 45.8
FvH4_1g12000 Fragaria vesca HOM05D005734 ORTHO05D006990 6.5e-09 63.9 83 44.6
Medtr5g021750 Medicago truncatula HOM05D005734 ORTHO05D006990 6.5e-09 63.9 82 45.1
THA.LOC104819182 Tarenaya hassleriana HOM05D005734 ORTHO05D006990 1.1e-08 63.2 83 45.8
EL10Ac3g07303 Beta vulgaris HOM05D005734 ORTHO05D006990 1.5e-08 62.8 82 45.1
CiPaw.08G133400 Carya illinoinensis HOM05D005734 ORTHO05D006990 1.5e-08 62.8 82 42.7
Manes.02G102700 Manihot esculenta HOM05D005734 ORTHO05D006990 1.5e-08 62.8 84 46.4
SalBow3G4629 Salvia bowleyana HOM05D005734 ORTHO05D006990 1.5e-08 62.8 82 42.7
FAN19G0086 Fragaria x ananassa HOM05D005734 ORTHO05D006990 1.9e-08 62.4 83 43.4
Gohir.A02G169800 Gossypium hirsutum HOM05D005734 ORTHO05D006990 1.9e-08 62.4 83 47.0
Nn5g29268 Nelumbo nucifera HOM05D005734 ORTHO05D006990 1.9e-08 62.4 84 44.0
Lj2g0025294 Lotus japonicus HOM05D005734 ORTHO05D006990 2.5e-08 62.0 83 45.8
Potri.007G014000 Populus trichocarpa HOM05D005734 ORTHO05D006990 2.5e-08 62.0 83 44.6
PGSC0003DMG400003554 Solanum tuberosum HOM05D005734 ORTHO05D006990 3.2e-08 61.6 40 75.0
Lj2A474G36 Lonicera japonica HOM05D005734 ORTHO05D006990 4.2e-08 61.2 41 73.2
Psat2g155360 Pisum sativum HOM05D005734 ORTHO05D006990 7.2e-08 60.5 82 42.7
ClCG07G008420 Citrullus lanatus HOM05D005734 ORTHO05D006990 1.2e-07 59.7 84 44.0
Sed0005630 Sechium edule HOM05D005734 ORTHO05D006990 1.6e-07 59.3 84 44.0
Cpa.g.sc6.229 Carica papaya HOM05D005734 ORTHO05D006990 2.1e-07 58.9 80 40.0
Hund14038 Selenicereus undatus HOM05D005734 ORTHO05D006990 3.6e-07 58.2 40 75.0
MELO3C016376.2 Cucumis melo HOM05D005734 ORTHO05D006990 6.1e-07 57.4 84 44.0
vmacro18422 Vaccinium macrocarpon HOM05D005734 ORTHO05D006990 6.1e-07 57.4 40 75.0
CsaV3_4G005730 Cucumis sativus L. HOM05D005734 ORTHO05D006990 1.0e-06 56.6 84 44.0
DCAR_017347 Daucus carota HOM05D005734 ORTHO05D006990 1.4e-06 56.2 82 42.7
CSS0018444 Camellia sinensis var. sinensis HOM05D049081 ORTHO05D112653 2.3e-06 55.5 40 70.0
CSS0030303 Camellia sinensis var. sinensis HOM05D049081 ORTHO05D109731 5.2e-06 54.3 40 70.0
arahy.Tifrunner.gnm1.ann1.GC558H Arachis hypogaea HOM05D005734 ORTHO05D006990 8.8e-06 53.5 82 40.2


User provided reference genes

Program Settings