Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L03465 Eucalyptus grandis HOM05D001484 ORTHO05D001564 1.6e-97 359.4 179 100.0
Eucgr.A00855 Eucalyptus grandis HOM05D001484 ORTHO05D001564 1.8e-72 276.2 152 93.4
Eucgr.A00858 Eucalyptus grandis HOM05D001484 ORTHO05D001564 2.5e-66 255.8 152 84.9
Dinv16926 Davidia involucrata HOM05D001484 ORTHO05D001564 5.3e-32 141.7 150 51.3
CiPaw.09G224900 Carya illinoinensis HOM05D001484 ORTHO05D001564 2.6e-31 139.4 149 49.0
QL07p030546 Quercus lobata HOM05D001484 ORTHO05D001564 7.7e-31 137.9 149 49.7
QL07p031519 Quercus lobata HOM05D001484 ORTHO05D001564 7.7e-31 137.9 149 49.7
Haze_21217 Corylus avellana HOM05D001484 ORTHO05D001564 4.2e-29 132.1 148 47.3
PGR031G2937 Punica granatum HOM05D001484 ORTHO05D001564 7.2e-29 131.3 152 45.4
Cfa016988 Carpinus fangiana HOM05D001484 ORTHO05D001564 3.6e-28 129.0 148 46.6
PSO339G0606 Papaver somniferum HOM05D001484 ORTHO05D001564 3.9e-27 125.6 144 45.8
PSO384G4709 Papaver somniferum HOM05D001484 ORTHO05D001564 3.9e-27 125.6 144 45.8
Lj2A54G84 Lonicera japonica HOM05D001484 ORTHO05D001564 5.2e-27 125.2 150 46.7
Nn5g26754 Nelumbo nucifera HOM05D001484 ORTHO05D001564 2.6e-26 122.9 142 44.4
GSVIVG01029847001 Vitis vinifera HOM05D001484 ORTHO05D001564 5.7e-26 121.7 153 45.1
FvH4_6g09250 Fragaria vesca HOM05D001484 ORTHO05D001564 8.2e-25 117.9 141 47.5
FAN14G1546 Fragaria x ananassa HOM05D001484 ORTHO05D001564 8.2e-25 117.9 141 47.5
FAN05G3381 Fragaria x ananassa HOM05D001484 ORTHO05D001564 1.4e-24 117.1 141 47.5
Actinidia11473 Actinidia chinensis HOM05D001484 ORTHO05D001564 1.8e-24 116.7 148 43.9
CSS0036150 Camellia sinensis var. sinensis HOM05D001484 ORTHO05D001564 4.1e-24 115.5 140 42.9
CSS0042300 Camellia sinensis var. sinensis HOM05D001484 ORTHO05D001564 4.1e-24 115.5 140 42.9
MD04G1179600 Malus domestica HOM05D001484 ORTHO05D001564 7.0e-24 114.8 143 46.9
TAR623G0078 Trochodendron aralioides HOM05D001484 ORTHO05D001564 7.0e-24 114.8 150 44.0
RcHm_v2.0_Chr3g0459591 Rosa chinensis HOM05D001484 ORTHO05D001564 9.1e-24 114.4 141 47.5
MD12G1194700 Malus domestica HOM05D001484 ORTHO05D001564 5.9e-23 111.7 143 45.5
Thecc.05G268900 Theobroma cacao HOM05D001484 ORTHO05D001564 7.7e-23 111.3 155 41.9
Aqoxy2G00671 Aquilegia oxysepala HOM05D001484 ORTHO05D001564 1.0e-22 110.9 147 42.2
Prupe.6G299600 Prunus persica HOM05D001484 ORTHO05D001564 1.0e-22 110.9 143 44.8
MBI03_g36854_MAGBIO Magnolia biondii HOM05D001484 ORTHO05D001564 1.7e-22 110.2 144 41.0
Manes.09G120300 Manihot esculenta HOM05D001484 ORTHO05D001564 2.2e-22 109.8 152 42.8
Atru.chr8.46 Acer truncatum HOM05D001484 ORTHO05D001564 8.5e-22 107.8 152 42.8
COL.COLO4_25124 Corchorus olitorius HOM05D001484 ORTHO05D001564 8.5e-22 107.8 146 41.1
Cpa.g.sc60.37 Carica papaya HOM05D001484 ORTHO05D001564 1.5e-21 107.1 143 42.7
Rhsim05G0234500 Rhododendron simsii HOM05D001484 ORTHO05D001564 1.5e-21 107.1 156 40.4
MBI03_g14058_MAGBIO Magnolia biondii HOM05D001484 ORTHO05D001564 2.5e-21 106.3 146 41.1
CDE07G0968 Ceratophyllum demersum HOM05D001484 ORTHO05D001564 1.6e-20 103.6 122 43.4
TWI74G0430 Tripterygium wilfordii HOM05D001484 ORTHO05D001564 2.1e-20 103.2 153 41.2
Ciclev10010920m.g Citrus clementina HOM05D001484 ORTHO05D001564 1.5e-18 97.1 143 40.6
Sabra04G0158500 Salix brachista HOM05D001484 ORTHO05D001564 3.7e-17 92.4 153 39.9
Potri.016G142500 Populus trichocarpa HOM05D001484 ORTHO05D001564 6.3e-17 91.7 153 38.6
arahy.Tifrunner.gnm1.ann1.4KR684 Arachis hypogaea HOM05D001484 ORTHO05D001564 4.1e-16 89.0 139 35.3
arahy.Tifrunner.gnm1.ann1.KM073U Arachis hypogaea HOM05D001484 ORTHO05D001564 4.1e-16 89.0 139 35.3
ATR1127G141 Amborella trichopoda HOM05D001484 ORTHO05D001564 1.6e-15 87.0 150 34.7
Lj1g0010239 Lotus japonicus HOM05D001484 ORTHO05D001564 1.7e-14 83.6 148 37.8
VMungo1383G2910 Vigna mungo HOM05D001484 ORTHO05D001564 1.7e-14 83.6 143 39.2
Phvul.008G078200 Phaseolus vulgaris HOM05D001484 ORTHO05D001564 2.9e-14 82.8 143 39.9
TPR.G24282 Trifolium pratense HOM05D001484 ORTHO05D001564 8.5e-14 81.3 150 34.0
Glyma.18G218900 Glycine max HOM05D001484 ORTHO05D001564 2.5e-13 79.7 91 50.5
Psat3g113840 Pisum sativum HOM05D001484 ORTHO05D001564 9.4e-13 77.8 143 34.3
Medtr7g074290 Medicago truncatula HOM05D001484 ORTHO05D001564 1.2e-12 77.4 143 32.9
Ca_07801_v3 Cicer arietinum L. HOM05D001484 ORTHO05D001564 4.7e-12 75.5 132 36.4
Os05g0312000 Oryza sativa ssp. japonica HOM05D001484 ORTHO05D001564 1.2e-10 70.9 148 31.1
THA.LOC104812792 Tarenaya hassleriana HOM05D001484 ORTHO05D001564 1.2e-10 70.9 102 41.2
Oeu063835.1 Olea europaea HOM05D001484 ORTHO05D001564 6.3e-09 65.1 146 30.8
Sc02g0000060 Simmondsia chinensis HOM05D001484 ORTHO05D001564 4.1e-08 62.4 135 31.9
FAN09G0402 Fragaria x ananassa HOM05D001484 ORTHO05D001564 7.0e-08 61.6 64 53.1
Zm00001eb285040 Zea mays HOM05D001484 ORTHO05D001564 2.0e-07 60.1 148 29.1
Os07g0681500 Oryza sativa ssp. japonica HOM05D001484 ORTHO05D001564 5.9e-07 58.5 140 29.3
SEGI_24396 Sequoiadendron giganteum HOM05D001484 ORTHO05D001564 7.7e-07 58.2 121 31.4
Zm00001eb330790 Zea mays HOM05D001484 ORTHO05D001564 1.3e-06 57.4 118 31.4


User provided reference genes

Program Settings