Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L03442 Eucalyptus grandis HOM05D000633 ORTHO05D000477 2.4e-33 144.8 69 100.0
Eucgr.J02804 Eucalyptus grandis HOM05D000633 ORTHO05D000477 3.0e-23 111.3 66 83.3
TPR.G16735 Trifolium pratense HOM05D000633 ORTHO05D000477 3.2e-09 64.7 63 49.2
VMungo0331G1059 Vigna mungo HOM05D000633 ORTHO05D000477 4.2e-09 64.3 66 50.0
Phvul.010G128400 Phaseolus vulgaris HOM05D000633 ORTHO05D000477 9.3e-09 63.2 68 54.4
RcHm_v2.0_Chr2g0146181 Rosa chinensis HOM05D000633 ORTHO05D000477 1.2e-08 62.8 65 49.2
Lj3g0021496 Lotus japonicus HOM05D000633 ORTHO05D000477 1.6e-08 62.4 70 50.0
CANSAT56G1211 Cannabis sativa HOM05D000633 ORTHO05D000477 4.6e-08 60.8 64 50.0
Medtr8g021190 Medicago truncatula HOM05D000633 ORTHO05D000477 6.0e-08 60.5 66 48.5
Glyma.16G009000 Glycine max HOM05D000633 ORTHO05D000477 7.9e-08 60.1 69 46.4
Lalb_Chr10g0101431 Lupinus albus HOM05D000633 ORTHO05D000477 7.9e-08 60.1 70 48.6
Glyma.07G040400 Glycine max HOM05D000633 ORTHO05D000477 1.0e-07 59.7 69 50.7
ClCG09G001070 Citrullus lanatus HOM05D000633 ORTHO05D000477 1.3e-07 59.3 63 50.8
Duzib192G0234 Durio zibethinus HOM05D000633 ORTHO05D000477 1.3e-07 59.3 68 42.6
Ca_23397_v3 Cicer arietinum L. HOM05D000633 ORTHO05D000477 1.8e-07 58.9 64 46.9
MELO3C024344.2 Cucumis melo HOM05D000633 ORTHO05D000477 1.8e-07 58.9 63 50.8
CsaV3_7G034350 Cucumis sativus L. HOM05D000633 ORTHO05D000477 1.8e-07 58.9 63 50.8
Eucgr.F04401 Eucalyptus grandis HOM05D000633 ORTHO05D000477 1.8e-07 58.9 67 46.3
Thecc.06G122700 Theobroma cacao HOM05D000633 ORTHO05D000477 2.3e-07 58.5 68 41.2
Haze_16047 Corylus avellana HOM05D000633 ORTHO05D000477 3.0e-07 58.2 66 45.5
Sabra01G0126400 Salix brachista HOM05D000633 ORTHO05D000477 3.0e-07 58.2 72 44.4
Duzib160G0745 Durio zibethinus HOM05D000633 ORTHO05D000477 3.9e-07 57.8 68 41.2
Potri.001G166900 Populus trichocarpa HOM05D000633 ORTHO05D000477 3.9e-07 57.8 73 43.8
Lalb_Chr04g0253651 Lupinus albus HOM05D000633 ORTHO05D000477 5.1e-07 57.4 70 45.7
Psat4g168360 Pisum sativum HOM05D000633 ORTHO05D000477 5.1e-07 57.4 71 45.1
FvH4_6g35020 Fragaria vesca HOM05D000633 ORTHO05D000477 6.7e-07 57.0 65 43.1
FAN02G2321 Fragaria x ananassa HOM05D000633 ORTHO05D000477 6.7e-07 57.0 65 43.1
FAN09G0441 Fragaria x ananassa HOM05D000633 ORTHO05D000477 6.7e-07 57.0 65 43.1
FAN14G2291 Fragaria x ananassa HOM05D000633 ORTHO05D000477 6.7e-07 57.0 65 43.1
HanXRQChr05g0149961 Helianthus annuus HOM05D000633 ORTHO05D000477 6.7e-07 57.0 63 44.4
Cfa003521 Carpinus fangiana HOM05D000633 ORTHO05D000477 8.7e-07 56.6 66 45.5
CiPaw.02G134800 Carya illinoinensis HOM05D000633 ORTHO05D000477 8.7e-07 56.6 65 40.0
HanXRQChr09g0276801 Helianthus annuus HOM05D000633 ORTHO05D000477 8.7e-07 56.6 47 51.1
Lsat_1_v5_gn_1_38421 Lactuca sativa HOM05D000633 ORTHO05D000477 8.7e-07 56.6 63 46.0
Lalb_Chr17g0343541 Lupinus albus HOM05D000633 ORTHO05D000477 8.7e-07 56.6 68 44.1
PGR119G1770 Punica granatum HOM05D000633 ORTHO05D000477 8.7e-07 56.6 72 44.4
Actinidia24720 Actinidia chinensis HOM05D000633 ORTHO05D004685 1.1e-06 56.2 65 43.1
Duzib235G0787 Durio zibethinus HOM05D000633 ORTHO05D000477 1.9e-06 55.5 70 45.7
QL05p003972 Quercus lobata HOM05D000633 ORTHO05D000477 1.9e-06 55.5 64 40.6
ATR0598G018 Amborella trichopoda HOM05D000633 ORTHO05D000477 3.3e-06 54.7 68 47.1
FAN05G1956 Fragaria x ananassa HOM05D000633 ORTHO05D000477 3.3e-06 54.7 65 41.5
Manes.11G017400 Manihot esculenta HOM05D000633 ORTHO05D000477 3.3e-06 54.7 73 42.5
Potri.003G067800 Populus trichocarpa HOM05D000633 ORTHO05D000477 3.3e-06 54.7 77 40.3
ECA247G1216 Erigeron canadensis HOM05D000633 ORTHO05D000477 4.3e-06 54.3 52 46.2
TWI34G1849 Tripterygium wilfordii HOM05D000633 ORTHO05D000477 4.3e-06 54.3 65 41.5
HPP92_008733 Vanilla planifolia HOM05D000633 ORTHO05D000477 4.3e-06 54.3 36 61.1
Actinidia26019 Actinidia chinensis HOM05D000633 ORTHO05D000477 5.6e-06 53.9 66 40.9
Dinv20418 Davidia involucrata HOM05D000633 ORTHO05D000477 5.6e-06 53.9 66 42.4
MD17G1165800 Malus domestica HOM05D000633 ORTHO05D000477 5.6e-06 53.9 69 42.0
Gohir.A10G055500 Gossypium hirsutum HOM05D000633 ORTHO05D000477 7.4e-06 53.5 68 38.2
Gohir.D10G057400 Gossypium hirsutum HOM05D000633 ORTHO05D000477 7.4e-06 53.5 68 38.2
Gorai.011G061500 Gossypium raimondii HOM05D000633 ORTHO05D000477 7.4e-06 53.5 68 38.2
MBI19_g09928_MAGBIO Magnolia biondii HOM05D000633 ORTHO05D000477 7.4e-06 53.5 70 41.4
GSVIVG01016733001 Vitis vinifera HOM05D000633 ORTHO05D000477 7.4e-06 53.5 64 42.2
Sed0007737 Sechium edule HOM05D000633 ORTHO05D000477 9.6e-06 53.1 35 62.9


User provided reference genes

Program Settings