Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L03404 Eucalyptus grandis HOM05D004203 ORTHO05D004830 1.3e-246 855.9 418 100.0
Eucgr.G02598 Eucalyptus grandis HOM05D004203 ORTHO05D004830 4.0e-240 834.3 418 97.4
Eucgr.G02607 Eucalyptus grandis HOM05D004203 ORTHO05D004830 1.0e-214 750.0 418 85.4
Eucgr.G02596 Eucalyptus grandis HOM05D004203 ORTHO05D004830 3.9e-203 711.4 416 81.7
Eucgr.G02594 Eucalyptus grandis HOM05D004203 ORTHO05D004830 2.3e-195 685.6 418 78.5
Eucgr.G02595 Eucalyptus grandis HOM05D004203 ORTHO05D004830 4.1e-192 674.9 419 77.3
DCAR_026874 Daucus carota HOM05D004203 ORTHO05D004830 1.0e-187 660.2 418 74.4
Potri.007G001200 Populus trichocarpa HOM05D004203 ORTHO05D004830 2.7e-183 645.6 418 73.7
Sabra07G0000900 Salix brachista HOM05D004203 ORTHO05D004830 7.7e-183 644.0 417 73.1
Ciclev10015311m.g Citrus clementina HOM05D004203 ORTHO05D004830 2.2e-182 642.5 418 72.2
Actinidia13679 Actinidia chinensis HOM05D004203 ORTHO05D004830 1.2e-180 636.7 419 71.8
Atru.chr11.55 Acer truncatum HOM05D004203 ORTHO05D004830 2.7e-180 635.6 416 72.6
Peaxi162Scf00603g00031 Petunia axillaris HOM05D004203 ORTHO05D004830 4.7e-180 634.8 419 73.0
PGR142G4147 Punica granatum HOM05D004203 ORTHO05D004830 1.4e-179 633.3 423 72.6
COL.COLO4_33135 Corchorus olitorius HOM05D004203 ORTHO05D004830 1.8e-179 632.9 418 72.5
Duzib248G1608 Durio zibethinus HOM05D004203 ORTHO05D004830 6.8e-179 630.9 418 72.0
Hma1.2p1_0513F.1_g169570 Hydrangea macrophylla HOM05D004203 ORTHO05D004830 1.5e-178 629.8 418 70.6
TWI74G0727 Tripterygium wilfordii HOM05D004203 ORTHO05D004830 2.0e-178 629.4 418 72.5
CiPaw.15G000900 Carya illinoinensis HOM05D004203 ORTHO05D004830 9.8e-178 627.1 418 70.6
Thecc.02G153000 Theobroma cacao HOM05D004203 ORTHO05D004830 1.3e-177 626.7 418 71.3
QL01p000433 Quercus lobata HOM05D004203 ORTHO05D004830 2.2e-177 625.9 417 71.2
Manes.04G161600 Manihot esculenta HOM05D004203 ORTHO05D004830 2.8e-177 625.5 418 69.9
Haze_17403 Corylus avellana HOM05D004203 ORTHO05D004830 1.1e-176 623.6 417 71.5
TAR623G0552 Trochodendron aralioides HOM05D004203 ORTHO05D004830 3.1e-176 622.1 418 72.0
Cpa.g.sc257.7 Carica papaya HOM05D004203 ORTHO05D004830 4.1e-176 621.7 418 70.6
Nitab4.5_0001803g0070 Nicotiana tabacum HOM05D004203 ORTHO05D004830 7.0e-176 620.9 417 71.2
Oeu027932.1 Olea europaea HOM05D004203 ORTHO05D004830 7.0e-176 620.9 419 70.6
PSO063G7450 Papaver somniferum HOM05D004203 ORTHO05D004830 1.2e-175 620.2 418 68.9
PSO782G5227 Papaver somniferum HOM05D004203 ORTHO05D004830 1.6e-175 619.8 418 69.4
Cfa018675 Carpinus fangiana HOM05D004203 ORTHO05D004830 2.0e-175 619.4 416 71.6
Cc11_g04600 Coffea canephora HOM05D004203 ORTHO05D004830 3.5e-175 618.6 418 69.9
Aa31LG8G6770 Aethionema arabicum HOM05D004203 ORTHO05D004830 5.9e-175 617.8 419 69.0
Aqoxy3G04325 Aquilegia oxysepala HOM05D004203 ORTHO05D004830 5.9e-175 617.8 420 69.3
Carub.0003s1989 Capsella rubella HOM05D004203 ORTHO05D004830 5.9e-175 617.8 419 69.7
Gorai.013G067000 Gossypium raimondii HOM05D004203 ORTHO05D004830 7.7e-175 617.5 418 70.3
AUR62032903 Chenopodium quinoa HOM05D004203 ORTHO05D004830 1.0e-174 617.1 418 70.1
Gohir.A13G062700 Gossypium hirsutum HOM05D004203 ORTHO05D004830 1.0e-174 617.1 418 70.3
Gohir.D13G059200 Gossypium hirsutum HOM05D004203 ORTHO05D004830 1.0e-174 617.1 418 70.3
Nitab4.5_0001018g0120 Nicotiana tabacum HOM05D004203 ORTHO05D004830 1.0e-174 617.1 417 71.0
ClCG01G007960 Citrullus lanatus HOM05D004203 ORTHO05D004830 1.7e-174 616.3 419 68.0
CARHR095520 Cardamine hirsuta HOM05D004203 ORTHO05D004830 2.9e-174 615.5 419 69.7
Atru.chr11.58 Acer truncatum HOM05D004203 ORTHO05D004830 3.8e-174 615.1 408 71.3
Thhalv10020793m.g Eutrema salsugineum HOM05D004203 ORTHO05D004830 5.0e-174 614.8 419 69.7
MD13G1001600 Malus domestica HOM05D004203 ORTHO05D004830 5.0e-174 614.8 428 70.1
BraA05t21796Z Brassica rapa HOM05D004203 ORTHO05D004830 6.5e-174 614.4 419 69.9
BcaB06g26068 Brassica carinata HOM05D004203 ORTHO05D004830 1.1e-173 613.6 419 69.2
AL3G33640 Arabidopsis lyrata HOM05D004203 ORTHO05D004830 1.9e-173 612.8 419 69.9
AT3G19990 Arabidopsis thaliana HOM05D004203 ORTHO05D004830 1.9e-173 612.8 419 69.2
A05p29130 Brassica napus HOM05D004203 ORTHO05D004830 2.5e-173 612.5 419 69.7
CANSAT78G1232 Cannabis sativa HOM05D004203 ORTHO05D004830 2.5e-173 612.5 419 70.4
Prupe.1G350900 Prunus persica HOM05D004203 ORTHO05D004830 1.2e-172 610.1 439 67.7
Sp3g18010 Schrenkiella parvula HOM05D004203 ORTHO05D004830 1.2e-172 610.1 419 69.5
MBI06_g12559_MAGBIO Magnolia biondii HOM05D004203 ORTHO05D004830 2.7e-172 609.0 418 71.3
Dinv37943 Davidia involucrata HOM05D004203 ORTHO05D004830 4.7e-172 608.2 420 70.5
Lalb_Chr17g0337651 Lupinus albus HOM05D004203 ORTHO05D004830 4.7e-172 608.2 418 68.7
VMungo0900G0001 Vigna mungo HOM05D004203 ORTHO05D004830 4.7e-172 608.2 418 69.4
BraA01t03555Z Brassica rapa HOM05D004203 ORTHO05D004830 6.1e-172 607.8 418 69.9
Cc11_g04630 Coffea canephora HOM05D004203 ORTHO05D004830 6.1e-172 607.8 418 67.7
BcaB04g20673 Brassica carinata HOM05D004203 ORTHO05D004830 8.0e-172 607.4 419 69.9
A01p34680 Brassica napus HOM05D004203 ORTHO05D004830 8.0e-172 607.4 418 69.4
BcaC05g28375 Brassica carinata HOM05D004203 ORTHO05D004830 1.4e-171 606.7 419 69.5
BolC5t33177H Brassica oleracea HOM05D004203 ORTHO05D004830 1.4e-171 606.7 419 69.5
Lsat_1_v5_gn_3_35621 Lactuca sativa HOM05D004203 ORTHO05D004830 1.8e-171 606.3 420 67.9
Sopen11g002260 Solanum pennellii HOM05D004203 ORTHO05D004830 1.8e-171 606.3 419 68.7
EL10Ac9g23011 Beta vulgaris HOM05D004203 ORTHO05D004830 2.3e-171 605.9 416 69.0
CAN.G143.62 Capsicum annuum HOM05D004203 ORTHO05D004830 2.3e-171 605.9 419 68.0
PGSC0003DMG400000979 Solanum tuberosum HOM05D004203 ORTHO05D004830 3.0e-171 605.5 419 68.5
C01p44100 Brassica napus HOM05D004203 ORTHO05D004830 5.2e-171 604.7 419 69.7
BolC1t04373H Brassica oleracea HOM05D004203 ORTHO05D004830 5.2e-171 604.7 419 69.7
BcaC09g48955 Brassica carinata HOM05D004203 ORTHO05D004830 1.2e-170 603.6 419 69.5
AUR62017749 Chenopodium quinoa HOM05D004203 ORTHO05D004830 1.2e-170 603.6 414 68.6
CSS0042488 Camellia sinensis var. sinensis HOM05D004203 ORTHO05D004830 2.0e-170 602.8 419 69.9
Phvul.003G000800 Phaseolus vulgaris HOM05D004203 ORTHO05D004830 3.4e-170 602.1 418 67.7
THA.LOC104826512 Tarenaya hassleriana HOM05D004203 ORTHO05D004830 3.4e-170 602.1 418 68.2
Hund24393 Selenicereus undatus HOM05D004203 ORTHO05D004830 2.8e-169 599.0 420 67.9
Medtr0365s0010 Medicago truncatula HOM05D004203 ORTHO05D004830 4.9e-169 598.2 419 68.5
Duzib132G1212 Durio zibethinus HOM05D004203 ORTHO05D004830 6.3e-169 597.8 418 67.7
CsaV3_5G021930 Cucumis sativus L. HOM05D004203 ORTHO05D004830 1.1e-168 597.0 419 67.3
Glyma.09G285700 Glycine max HOM05D004203 ORTHO05D004830 1.1e-168 597.0 423 69.0
MELO3C005084.2 Cucumis melo HOM05D004203 ORTHO05D004830 7.0e-168 594.3 418 66.3
RcHm_v2.0_Chr4g0447121 Rosa chinensis HOM05D004203 ORTHO05D004830 7.0e-168 594.3 418 69.1
HanXRQChr15g0472171 Helianthus annuus HOM05D004203 ORTHO05D004830 3.5e-167 592.0 423 65.7
ClCG01G007980 Citrullus lanatus HOM05D004203 ORTHO05D004830 3.8e-166 588.6 417 65.0
Psat6g100840 Pisum sativum HOM05D004203 ORTHO05D004830 3.8e-166 588.6 421 66.7
CDE04G2894 Ceratophyllum demersum HOM05D004203 ORTHO05D004830 8.6e-166 587.4 418 66.5
Lj2g0024262 Lotus japonicus HOM05D004203 ORTHO05D004830 8.6e-166 587.4 418 68.4
FvH4_4g37300 Fragaria vesca HOM05D004203 ORTHO05D004830 1.5e-165 586.6 418 68.9
Sed0024681 Sechium edule HOM05D004203 ORTHO05D004830 2.5e-165 585.9 418 65.3
FAN17G0196 Fragaria x ananassa HOM05D004203 ORTHO05D004830 1.2e-164 583.6 418 68.7
Migut.O00611 Erythranthe guttata HOM05D004203 ORTHO05D004830 8.9e-163 577.4 418 64.8
MSTRG.8095 Avicennia marina HOM05D004203 ORTHO05D004830 3.4e-162 575.5 420 65.7
Ca_12360_v3 Cicer arietinum L. HOM05D004203 ORTHO05D004830 1.7e-161 573.2 418 66.7
Ca_12363_v3 Cicer arietinum L. HOM05D004203 ORTHO05D004830 1.7e-161 573.2 418 66.7
Migut.L00789 Erythranthe guttata HOM05D004203 ORTHO05D004830 2.9e-161 572.4 419 64.2
ECA246G0515 Erigeron canadensis HOM05D004203 ORTHO05D004830 4.9e-161 571.6 421 66.0
ECA246G1911 Erigeron canadensis HOM05D004203 ORTHO05D004830 1.3e-158 563.5 423 63.8
SalBow2G2162 Salvia bowleyana HOM05D004203 ORTHO05D004830 2.8e-156 555.8 418 62.7
Rhsim02G0210900 Rhododendron simsii HOM05D004203 ORTHO05D004830 1.4e-155 553.5 423 63.8
C05p44530 Brassica napus HOM05D004203 ORTHO05D004830 5.2e-155 551.6 419 64.7
SHI10741 Sapria himalayana HOM05D004203 ORTHO05D004830 3.7e-153 545.4 402 64.9
Gohir.D13G059100 Gossypium hirsutum HOM05D004203 ORTHO05D004830 3.2e-152 542.3 418 60.8
Gorai.013G066900 Gossypium raimondii HOM05D004203 ORTHO05D004830 2.0e-151 539.7 418 60.3
HPP92_022176 Vanilla planifolia HOM05D004203 ORTHO05D004830 2.7e-151 539.3 419 61.1
Lsat_1_v5_gn_4_27720 Lactuca sativa HOM05D004203 ORTHO05D004830 7.8e-151 537.7 419 60.4
unitig_749.g13343 Utricularia gibba HOM05D004203 ORTHO05D004830 1.3e-150 537.0 418 62.2
Os02g0828200 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 1.5e-146 523.5 420 60.2
ECA234G3608 Erigeron canadensis HOM05D004203 ORTHO05D004830 3.4e-146 522.3 421 58.9
HPP92_005409 Vanilla planifolia HOM05D004203 ORTHO05D004830 9.8e-146 520.8 422 62.8
Zm00001eb259360 Zea mays HOM05D004203 ORTHO05D004830 2.9e-145 519.2 417 59.5
QL01p000454 Quercus lobata HOM05D004203 ORTHO05D004830 1.9e-144 516.5 417 60.9
ATR0124G027 Amborella trichopoda HOM05D004203 ORTHO05D004830 1.0e-142 510.8 418 59.6
HanXRQChr17g0559591 Helianthus annuus HOM05D004203 ORTHO05D004830 9.5e-141 504.2 423 56.7
Lsat_1_v5_gn_8_139521 Lactuca sativa HOM05D004203 ORTHO05D004830 2.3e-139 499.6 423 56.5
QL01p000540 Quercus lobata HOM05D004203 ORTHO05D004830 4.0e-139 498.8 361 67.0
SEGI_02027 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 3.4e-138 495.7 451 52.3
HanXRQChr09g0251301 Helianthus annuus HOM05D004203 ORTHO05D004830 5.8e-138 495.0 420 55.0
Os02g0828500 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 2.9e-137 492.7 420 56.4
ECA233G1072 Erigeron canadensis HOM05D004203 ORTHO05D004830 2.0e-130 469.9 401 55.6
MD16G1004500 Malus domestica HOM05D004203 ORTHO05D004830 3.4e-122 442.6 408 56.9
AagrBONN_evm.TU.Sc2ySwM_368.1197 Anthoceros agrestis HOM05D004203 ORTHO05D004830 4.6e-119 432.2 441 50.1
TPR.G34239 Trifolium pratense HOM05D004203 ORTHO05D004830 5.6e-117 425.2 315 66.3
SMO117G0084 Selaginella moellendorffii HOM05D004203 ORTHO05D004830 1.7e-113 413.7 417 50.4
Mapoly0080s0012 Marchantia polymorpha HOM05D004203 ORTHO05D004830 2.1e-111 406.8 417 48.2
Pp3c17_21640 Physcomitrium patens HOM05D004203 ORTHO05D004830 8.2e-108 394.8 413 46.5
Thecc.02G152900 Theobroma cacao HOM05D004203 ORTHO05D004830 4.0e-107 392.5 302 62.9
Sc08g0004160 Simmondsia chinensis HOM05D004203 ORTHO05D004830 1.5e-106 390.6 268 67.5
GSVIVG01034366001 Vitis vinifera HOM05D004203 ORTHO05D004830 1.5e-101 374.0 418 48.3
SEGI_01054 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 9.7e-101 371.3 351 51.0
GSVIVG01034368001 Vitis vinifera HOM05D004203 ORTHO05D004830 1.3e-100 370.9 418 48.3
Cre16.g671500 Chlamydomonas reinhardtii HOM05D004203 ORTHO05D004830 5.0e-89 332.4 416 41.8
Prupe.1G351100 Prunus persica HOM05D004203 ORTHO05D004830 1.5e-85 320.9 239 64.9
Lj3A845T90 Lonicera japonica HOM05D004203 ORTHO05D004830 8.2e-84 315.1 245 62.4
Medtr0400s0020 Medicago truncatula HOM05D004203 ORTHO05D004830 3.4e-82 309.7 230 66.1
SEGI_32381 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 4.2e-80 302.8 296 50.7
Lj3C845T9 Lonicera japonica HOM05D004203 ORTHO05D004830 7.7e-58 228.8 145 72.4
Atru.chr11.60 Acer truncatum HOM05D004203 ORTHO05D004830 8.9e-54 215.3 157 66.2
SEGI_16211 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 2.9e-49 200.3 323 38.1
Sc08g0004150 Simmondsia chinensis HOM05D004203 ORTHO05D004830 2.0e-45 187.6 145 61.4
BcaB08g37041 Brassica carinata HOM05D004203 ORTHO05D004830 5.4e-43 179.5 147 61.2
Sc08g0004170 Simmondsia chinensis HOM05D004203 ORTHO05D004830 1.0e-41 175.3 134 61.2
Solyc11g006360.1 Solanum lycopersicum HOM05D004203 ORTHO05D004830 3.9e-41 173.3 116 69.0
SEGI_00877 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 5.6e-40 169.5 215 44.7
FAN12G3670 Fragaria x ananassa HOM05D004203 ORTHO05D004830 1.6e-39 167.9 159 57.9
PRCOL_00005471 Prasinoderma coloniale HOM05D004553 ORTHO05D005426 3.2e-35 153.7 415 28.0
BcaB06g27490 Brassica carinata HOM05D004203 ORTHO05D004830 1.4e-30 138.3 146 54.8
Atru.chr11.61 Acer truncatum HOM05D004203 ORTHO05D004830 3.1e-30 137.1 133 54.9
Sc08g0004180 Simmondsia chinensis HOM05D004203 ORTHO05D004830 5.2e-22 109.8 80 66.2
BcaB06g26576 Brassica carinata HOM05D004203 ORTHO05D004830 7.6e-21 105.9 78 65.4
BcaC07g39871 Brassica carinata HOM05D004203 ORTHO05D004830 1.3e-20 105.1 80 65.0
BcaB06g27492 Brassica carinata HOM05D004203 ORTHO05D004830 3.5e-18 97.1 95 56.8
BcaB08g37040 Brassica carinata HOM05D004203 ORTHO05D004830 3.5e-18 97.1 71 66.2
BcaB06g27488 Brassica carinata HOM05D004203 ORTHO05D004830 5.1e-17 93.2 88 55.7
Os03g0251425 Oryza sativa ssp. japonica HOM05D004203 ORTHO05D004830 5.1e-17 93.2 97 46.4
Sc08g0004140 Simmondsia chinensis HOM05D004203 ORTHO05D004830 5.2e-14 83.2 96 45.8
BcaB06g27495 Brassica carinata HOM05D004203 ORTHO05D004830 2.6e-13 80.9 60 63.3
SEGI_08354 Sequoiadendron giganteum HOM05D004203 ORTHO05D004830 5.8e-13 79.7 68 47.1
BcaB06g27494 Brassica carinata HOM05D004203 ORTHO05D004830 3.8e-12 77.0 60 63.3
MCO08G255 Micromonas commoda HOM05D004203 ORTHO05D004830 2.3e-09 67.8 106 37.7
GSVIVG01034364001 Vitis vinifera HOM05D004203 ORTHO05D004830 3.9e-09 67.0 62 54.8
BcaC07g38231 Brassica carinata HOM05D004203 ORTHO05D004830 4.3e-08 63.5 59 61.0
BcaB06g26577 Brassica carinata HOM05D004203 ORTHO05D004830 5.6e-08 63.2 61 57.4
COL.COLO4_33125 Corchorus olitorius HOM05D004203 ORTHO05D004830 7.3e-08 62.8 39 69.2
Pp3c14_4390 Physcomitrium patens HOM05D004203 ORTHO05D004830 3.6e-07 60.5 72 37.5
BcaB05g24942 Brassica carinata HOM05D004203 ORTHO05D004830 1.4e-06 58.5 40 62.5


User provided reference genes

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