Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L03382 Eucalyptus grandis HOM05D005479 ORTHO05D007756 6.4e-54 213.8 104 100.0
Eucgr.H04378 Eucalyptus grandis HOM05D005479 ORTHO05D007756 3.2e-53 211.5 104 98.1
Eucgr.H04377 Eucalyptus grandis HOM05D005479 ORTHO05D007756 4.6e-52 207.6 104 95.2
Atru.chr2.800 Acer truncatum HOM05D005479 ORTHO05D007756 9.9e-39 163.3 104 75.0
RcHm_v2.0_Chr3g0451381 Rosa chinensis HOM05D005479 ORTHO05D007756 2.2e-38 162.2 104 74.0
MD12G1238800 Malus domestica HOM05D005479 ORTHO05D007756 8.4e-38 160.2 104 73.1
FAN05G1441 Fragaria x ananassa HOM05D005479 ORTHO05D007756 1.9e-37 159.1 104 71.2
FAN05G3323 Fragaria x ananassa HOM05D005479 ORTHO05D007756 1.9e-37 159.1 104 71.2
Ciclev10000348m.g Citrus clementina HOM05D005479 ORTHO05D007756 2.4e-37 158.7 100 75.0
Sabra13G0037000 Salix brachista HOM05D005479 ORTHO05D007756 2.4e-37 158.7 100 73.0
TWI74G0680 Tripterygium wilfordii HOM05D005479 ORTHO05D007756 4.2e-37 157.9 101 74.3
FvH4_6g03130 Fragaria vesca HOM05D005479 ORTHO05D007756 7.1e-37 157.1 104 71.2
CANSAT54G0735 Cannabis sativa HOM05D005479 ORTHO05D007756 1.6e-36 156.0 101 71.3
Actinidia05775 Actinidia chinensis HOM05D005479 ORTHO05D007756 2.7e-36 155.2 101 73.3
PGR004G2522 Punica granatum HOM05D005479 ORTHO05D007756 4.6e-36 154.5 104 73.1
TAR624G0950 Trochodendron aralioides HOM05D005479 ORTHO05D007756 4.6e-36 154.5 104 70.2
Potri.013G039600 Populus trichocarpa HOM05D005479 ORTHO05D007756 7.9e-36 153.7 100 69.0
Thecc.05G286400 Theobroma cacao HOM05D005479 ORTHO05D007756 7.9e-36 153.7 104 71.2
Duzib177G1118 Durio zibethinus HOM05D005479 ORTHO05D007756 1.3e-35 152.9 104 71.2
Cfa006446 Carpinus fangiana HOM05D005479 ORTHO05D007756 1.8e-35 152.5 104 68.3
CSS0032146 Camellia sinensis var. sinensis HOM05D005479 ORTHO05D007756 2.3e-35 152.1 100 73.0
Manes.08G133100 Manihot esculenta HOM05D005479 ORTHO05D007756 2.3e-35 152.1 100 70.0
Cpa.g.sc117.80 Carica papaya HOM05D005479 ORTHO05D007756 3.0e-35 151.8 104 68.3
FAN14G5841 Fragaria x ananassa HOM05D005479 ORTHO05D007756 3.0e-35 151.8 104 69.2
Rhsim07G0075700 Rhododendron simsii HOM05D005479 ORTHO05D007756 6.7e-35 150.6 101 71.3
QL03p025023 Quercus lobata HOM05D005479 ORTHO05D007756 8.7e-35 150.2 103 69.9
Lalb_Chr15g0076821 Lupinus albus HOM05D005479 ORTHO05D007756 1.5e-34 149.4 101 69.3
PSO541G1403 Papaver somniferum HOM05D005479 ORTHO05D007756 1.5e-34 149.4 103 68.0
DCAR_029737 Daucus carota HOM05D005479 ORTHO05D007756 1.9e-34 149.1 101 64.4
CiPaw.07G065500 Carya illinoinensis HOM05D005479 ORTHO05D007756 3.3e-34 148.3 101 69.3
GSVIVG01021825001 Vitis vinifera HOM05D005479 ORTHO05D007756 3.3e-34 148.3 104 71.2
Aqoxy1G01374 Aquilegia oxysepala HOM05D005479 ORTHO05D007756 4.3e-34 147.9 100 68.0
Hma1.2p1_0083F.1_g042820 Hydrangea macrophylla HOM05D005479 ORTHO05D007756 4.3e-34 147.9 101 67.3
PSO675G4284 Papaver somniferum HOM05D005479 ORTHO05D007756 4.3e-34 147.9 103 67.0
Glyma.19G243900 Glycine max HOM05D005479 ORTHO05D007756 7.4e-34 147.1 101 67.3
Nn7g38390 Nelumbo nucifera HOM05D005479 ORTHO05D007756 7.4e-34 147.1 104 66.3
MELO3C004372.2 Cucumis melo HOM05D005479 ORTHO05D007756 9.6e-34 146.7 100 67.0
SalBow4G0205 Salvia bowleyana HOM05D005479 ORTHO05D007756 2.1e-33 145.6 103 64.1
Gohir.D11G263500 Gossypium hirsutum HOM05D005479 ORTHO05D007756 2.8e-33 145.2 101 67.3
arahy.Tifrunner.gnm1.ann1.A0PUBP Arachis hypogaea HOM05D005479 ORTHO05D007756 3.7e-33 144.8 101 69.3
Oeu040763.1 Olea europaea HOM05D005479 ORTHO05D007756 4.8e-33 144.4 103 63.1
arahy.Tifrunner.gnm1.ann1.9C3ED3 Arachis hypogaea HOM05D005479 ORTHO05D007756 6.2e-33 144.1 101 68.3
CAN.G134.108 Capsicum annuum HOM05D005479 ORTHO05D007756 6.2e-33 144.1 104 66.3
SalBow4G0458 Salvia bowleyana HOM05D005479 ORTHO05D007756 6.2e-33 144.1 103 63.1
TPR.G7013 Trifolium pratense HOM05D005479 ORTHO05D007756 8.1e-33 143.7 101 65.3
Ah.06g192270 Amaranthus hybridus HOM05D005479 ORTHO05D007756 1.1e-32 143.3 102 65.7
CsaV3_2G004220 Cucumis sativus L. HOM05D005479 ORTHO05D007756 1.1e-32 143.3 98 67.3
unitig_21.g20055 Utricularia gibba HOM05D005479 ORTHO05D007756 1.1e-32 143.3 101 64.4
EL10Ac4g09118 Beta vulgaris HOM05D005479 ORTHO05D007756 1.4e-32 142.9 99 66.7
C07p39970 Brassica napus HOM05D005479 ORTHO05D007756 1.8e-32 142.5 101 64.4
BolC7t44530H Brassica oleracea HOM05D005479 ORTHO05D007756 1.8e-32 142.5 101 64.4
Gorai.007G283500 Gossypium raimondii HOM05D005479 ORTHO05D007756 1.8e-32 142.5 101 66.3
SGA_v2.0_scaffold81G26086 Striga asiatica HOM05D005479 ORTHO05D007756 1.8e-32 142.5 101 63.4
Gohir.A11G253600 Gossypium hirsutum HOM05D005479 ORTHO05D007756 2.4e-32 142.1 101 66.3
Medtr7g114940 Medicago truncatula HOM05D005479 ORTHO05D007756 2.4e-32 142.1 101 64.4
Phvul.006G100800 Phaseolus vulgaris HOM05D005479 ORTHO05D007756 2.4e-32 142.1 104 65.4
AUR62001022 Chenopodium quinoa HOM05D005479 ORTHO05D007756 3.1e-32 141.7 99 64.6
VMungo0540G0884 Vigna mungo HOM05D005479 ORTHO05D007756 4.0e-32 141.4 104 63.5
Migut.N01906 Erythranthe guttata HOM05D005479 ORTHO05D007756 5.3e-32 141.0 101 61.4
Sp2g19870 Schrenkiella parvula HOM05D005479 ORTHO05D007756 5.3e-32 141.0 99 65.7
THA.LOC104818635 Tarenaya hassleriana HOM05D005479 ORTHO05D007756 5.3e-32 141.0 100 68.0
COL.COLO4_15310 Corchorus olitorius HOM05D005479 ORTHO05D007756 6.9e-32 140.6 104 65.4
Psat3g007760 Pisum sativum HOM05D005479 ORTHO05D007756 9.0e-32 140.2 101 62.4
Lj1g0002084 Lotus japonicus HOM05D005479 ORTHO05D007756 1.2e-31 139.8 100 65.0
Cc02_g31990 Coffea canephora HOM05D005479 ORTHO05D007756 1.5e-31 139.4 101 60.4
Peaxi162Scf00282g00225 Petunia axillaris HOM05D005479 ORTHO05D007756 2.0e-31 139.0 100 64.0
Solyc01g097440.3 Solanum lycopersicum HOM05D005479 ORTHO05D007756 2.0e-31 139.0 104 62.5
Sed0025675 Sechium edule HOM05D005479 ORTHO05D007756 2.6e-31 138.7 100 65.0
Sopen01g041110 Solanum pennellii HOM05D005479 ORTHO05D007756 2.6e-31 138.7 104 62.5
CARHR287990 Cardamine hirsuta HOM05D005479 ORTHO05D007756 3.4e-31 138.3 102 64.7
AT5G49570 Arabidopsis thaliana HOM05D005479 ORTHO05D007756 4.5e-31 137.9 99 64.6
Ca_09415_v3 Cicer arietinum L. HOM05D005479 ORTHO05D007756 4.5e-31 137.9 101 62.4
AL8G23370 Arabidopsis lyrata HOM05D005479 ORTHO05D007756 5.8e-31 137.5 99 64.6
Hund22122 Selenicereus undatus HOM05D005479 ORTHO05D007756 5.8e-31 137.5 91 71.4
Carub.0008s0944 Capsella rubella HOM05D005479 ORTHO05D007756 1.0e-30 136.7 99 63.6
Thhalv10003714m.g Eutrema salsugineum HOM05D005479 ORTHO05D007756 1.7e-30 136.0 99 62.6
Aa31LG11G8350 Aethionema arabicum HOM05D005479 ORTHO05D007756 8.4e-30 133.7 99 60.6
PGSC0003DMG400019450 Solanum tuberosum HOM05D005479 ORTHO05D007756 1.4e-29 132.9 104 59.6
vmacro23344 Vaccinium macrocarpon HOM05D005479 ORTHO05D007756 1.4e-29 132.9 138 55.1
HanXRQChr09g0254821 Helianthus annuus HOM05D005479 ORTHO05D007756 7.1e-29 130.6 100 61.0
CDE11G0281 Ceratophyllum demersum HOM05D005479 ORTHO05D007756 2.1e-28 129.0 101 61.4
AUR62004929 Chenopodium quinoa HOM05D005479 ORTHO05D007756 2.1e-28 129.0 124 53.2
vmacro13830 Vaccinium macrocarpon HOM05D005479 ORTHO05D007756 1.3e-27 126.3 174 44.3
Zm00001eb105420 Zea mays HOM05D005479 ORTHO05D007756 1.8e-27 125.9 101 56.4
ECA232G3664 Erigeron canadensis HOM05D005479 ORTHO05D007756 5.1e-27 124.4 94 60.6
Sc09g0003880 Simmondsia chinensis HOM05D005479 ORTHO05D007756 9.6e-26 120.2 103 55.3
SEGI_17604 Sequoiadendron giganteum HOM05D005479 ORTHO05D007756 4.1e-24 114.8 101 49.5
TAR624G1307 Trochodendron aralioides HOM05D005479 ORTHO05D007756 2.0e-23 112.5 79 63.3
Dinv20863 Davidia involucrata HOM05D005479 ORTHO05D007756 1.9e-21 105.9 85 60.0
ATR0763G186 Amborella trichopoda HOM05D005479 ORTHO05D007756 2.5e-21 105.5 102 49.0
CBR_g7957 Chara braunii HOM05D005479 ORTHO05D007756 1.2e-20 103.2 101 51.5
A06p38260 Brassica napus HOM05D005479 ORTHO05D007756 1.6e-20 102.8 76 59.2
BraA06t26741Z Brassica rapa HOM05D005479 ORTHO05D007756 7.9e-20 100.5 76 57.9
SMO367G0213 Selaginella moellendorffii HOM05D005479 ORTHO05D007756 3.0e-19 98.6 100 46.0
SMO367G0055 Selaginella moellendorffii HOM05D005479 ORTHO05D007756 1.3e-17 93.2 100 43.0
Lsat_1_v5_gn_4_140660 Lactuca sativa HOM05D005479 ORTHO05D007756 1.8e-16 89.4 66 59.1
Mapoly0021s0092 Marchantia polymorpha HOM05D005479 ORTHO05D007756 2.4e-16 89.0 104 43.3
Pp3c4_6120 Physcomitrium patens HOM05D005479 ORTHO05D007756 1.4e-13 79.7 106 39.6
ClCG02G016550 Citrullus lanatus HOM05D005479 ORTHO05D007756 1.1e-10 70.1 100 42.0
Cc02_g31940 Coffea canephora HOM05D005479 ORTHO05D007756 9.7e-10 67.0 60 48.3
Lj7A489G24 Lonicera japonica HOM05D005479 ORTHO05D007756 7.7e-07 57.4 31 80.6
Cre01.g053900 Chlamydomonas reinhardtii HOM05D005479 ORTHO05D007756 2.2e-06 55.8 109 32.1


User provided reference genes

Program Settings