Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.C03022 Eucalyptus grandis HOM05D003538 ORTHO05D004376 1.3e-137 493.0 243 100.0
Eucgr.L03304 Eucalyptus grandis HOM05D003538 ORTHO05D004376 1.3e-137 493.0 243 100.0
PGR044G1201 Punica granatum HOM05D003538 ORTHO05D004376 1.7e-60 236.9 215 60.0
Atru.chr7.1041 Acer truncatum HOM05D003538 ORTHO05D004376 8.0e-47 191.4 237 46.4
Ciclev10007991m.g Citrus clementina HOM05D003538 ORTHO05D004376 1.0e-46 191.0 238 46.6
GSVIVG01035358001 Vitis vinifera HOM05D003538 ORTHO05D004376 6.7e-46 188.3 243 46.5
Gohir.A05G043100 Gossypium hirsutum HOM05D003538 ORTHO05D004376 2.2e-44 183.3 244 42.6
COL.COLO4_21041 Corchorus olitorius HOM05D003538 ORTHO05D004376 2.8e-44 183.0 242 43.4
Potri.006G230900 Populus trichocarpa HOM05D003538 ORTHO05D004376 4.8e-44 182.2 244 44.7
CANSAT25G2654 Cannabis sativa HOM05D003538 ORTHO05D004376 5.3e-43 178.7 233 46.4
Duzib168G2161 Durio zibethinus HOM05D003538 ORTHO05D004376 7.0e-43 178.3 241 42.7
QL02p001408 Quercus lobata HOM05D003538 ORTHO05D004376 1.0e-41 174.5 240 42.1
CiPaw.16G029300 Carya illinoinensis HOM05D003538 ORTHO05D004376 2.2e-41 173.3 228 43.0
Gorai.009G045900 Gossypium raimondii HOM05D003538 ORTHO05D004376 6.5e-41 171.8 244 40.2
TAR626G0286 Trochodendron aralioides HOM05D003538 ORTHO05D004376 8.5e-41 171.4 244 41.4
MBI03_g13775_MAGBIO Magnolia biondii HOM05D003538 ORTHO05D004376 1.4e-35 154.1 246 41.5
Sabra06G0179100 Salix brachista HOM05D003538 ORTHO05D004376 3.1e-35 152.9 275 37.1
Lj7C279G1 Lonicera japonica HOM05D003538 ORTHO05D004376 2.0e-34 150.2 186 44.6
TWI32G0386 Tripterygium wilfordii HOM05D003538 ORTHO05D004376 2.7e-34 149.8 213 43.7
Phvul.001G034000 Phaseolus vulgaris HOM05D003538 ORTHO05D004376 1.5e-32 144.1 218 41.7
VMungo0647G0716 Vigna mungo HOM05D003538 ORTHO05D004376 1.9e-32 143.7 222 43.2
Ca_13176_v3 Cicer arietinum L. HOM05D003538 ORTHO05D004376 3.2e-32 142.9 213 38.5
Actinidia01196 Actinidia chinensis HOM05D003538 ORTHO05D004376 7.2e-32 141.7 210 41.4
CSS0001901 Camellia sinensis var. sinensis HOM05D003538 ORTHO05D004376 9.4e-32 141.4 211 42.7
Lj5g0027111 Lotus japonicus HOM05D003538 ORTHO05D004376 1.2e-31 141.0 217 38.7
arahy.Tifrunner.gnm1.ann1.QX44E6 Arachis hypogaea HOM05D003538 ORTHO05D004376 8.0e-31 138.3 250 38.8
Dinv36743 Davidia involucrata HOM05D003538 ORTHO05D004376 8.0e-31 138.3 236 36.0
Glyma.14G093500 Glycine max HOM05D003538 ORTHO05D004376 8.0e-31 138.3 217 38.2
Cfa003115 Carpinus fangiana HOM05D003538 ORTHO05D004376 1.8e-30 137.1 237 36.3
TPR.G13110 Trifolium pratense HOM05D003538 ORTHO05D004376 5.2e-30 135.6 216 38.0
vmacro00153 Vaccinium macrocarpon HOM05D003538 ORTHO05D004376 1.2e-29 134.4 230 37.0
arahy.Tifrunner.gnm1.ann1.IE7M3R Arachis hypogaea HOM05D003538 ORTHO05D004376 1.5e-29 134.0 217 41.0
Rhsim11G0045200 Rhododendron simsii HOM05D003538 ORTHO05D004376 2.0e-29 133.7 212 39.6
Actinidia30305 Actinidia chinensis HOM05D003538 ORTHO05D004376 2.6e-29 133.3 206 39.8
Glyma.17G230200 Glycine max HOM05D003538 ORTHO05D004376 2.6e-29 133.3 217 37.8
Sed0023083 Sechium edule HOM05D003538 ORTHO05D004376 3.4e-29 132.9 207 38.6
Lalb_Chr22g0356041 Lupinus albus HOM05D003538 ORTHO05D004376 4.4e-29 132.5 213 42.3
Ciclev10007935m.g Citrus clementina HOM05D003538 ORTHO05D004376 9.8e-29 131.3 237 32.9
ClCG05G017780 Citrullus lanatus HOM05D003538 ORTHO05D004376 1.3e-28 131.0 207 37.2
Haze_18202 Corylus avellana HOM05D003538 ORTHO05D004376 2.8e-28 129.8 229 35.8
CsaV3_4G035550 Cucumis sativus L. HOM05D003538 ORTHO05D004376 4.8e-28 129.0 207 36.7
Nitab4.5_0001584g0040 Nicotiana tabacum HOM05D003538 ORTHO05D004376 1.1e-27 127.9 224 37.9
CiPaw.04G152000 Carya illinoinensis HOM05D003538 ORTHO05D004376 1.4e-27 127.5 237 35.0
Hma1.2p1_0482F.1_g162640 Hydrangea macrophylla HOM05D003538 ORTHO05D004376 1.4e-27 127.5 188 39.4
Atru.chr7.1545 Acer truncatum HOM05D003538 ORTHO05D004376 1.8e-27 127.1 227 36.1
Medtr1g016740 Medicago truncatula HOM05D003538 ORTHO05D004376 1.8e-27 127.1 227 34.8
PSO210G5813 Papaver somniferum HOM05D003538 ORTHO05D004376 1.8e-27 127.1 237 33.3
MELO3C016862.2 Cucumis melo HOM05D003538 ORTHO05D004376 7.0e-27 125.2 207 35.7
QL02p063126 Quercus lobata HOM05D003538 ORTHO05D004376 9.1e-27 124.8 237 32.9
Sopen08g019050 Solanum pennellii HOM05D003538 ORTHO05D004376 9.1e-27 124.8 210 37.1
Peaxi162Scf00136g00059 Petunia axillaris HOM05D003538 ORTHO05D004376 2.0e-26 123.6 209 36.4
Nn6g35422 Nelumbo nucifera HOM05D003538 ORTHO05D004376 2.7e-26 123.2 211 37.9
GSVIVG01015234001 Vitis vinifera HOM05D003538 ORTHO05D004376 2.7e-26 123.2 244 32.8
PGSC0003DMG400002203 Solanum tuberosum HOM05D003538 ORTHO05D004376 7.7e-26 121.7 188 40.4
Solyc08g065440.4 Solanum lycopersicum HOM05D003538 ORTHO05D004376 1.0e-25 121.3 210 36.7
TWI34G1305 Tripterygium wilfordii HOM05D003538 ORTHO05D004376 1.0e-25 121.3 238 33.6
Nitab4.5_0001179g0130 Nicotiana tabacum HOM05D003538 ORTHO05D004376 1.7e-25 120.6 225 36.4
PSO210G6318 Papaver somniferum HOM05D003538 ORTHO05D004376 5.5e-24 115.5 237 33.3
ClCG03G015790 Citrullus lanatus HOM05D003538 ORTHO05D004376 1.2e-23 114.4 237 30.4
Prupe.7G213400 Prunus persica HOM05D003538 ORTHO05D004376 2.8e-23 113.2 237 32.1
Hma1.2p1_0798F.1_g219590 Hydrangea macrophylla HOM05D003538 ORTHO05D004376 6.1e-23 112.1 236 29.2
Hma1.2p1_0798F.1_g219600 Hydrangea macrophylla HOM05D003538 ORTHO05D004376 6.1e-23 112.1 236 29.2
Hma1.2p1_1074F.1_g254274 Hydrangea macrophylla HOM05D003538 ORTHO05D004376 6.1e-23 112.1 236 29.2
Glyma.07G128300 Glycine max HOM05D003538 ORTHO05D004376 5.2e-22 109.0 237 34.2
Sed0013907 Sechium edule HOM05D003538 ORTHO05D004376 5.2e-22 109.0 237 29.5
Haze_25885 Corylus avellana HOM05D003538 ORTHO05D004376 1.2e-21 107.8 137 41.6
Solyc07g032260.3 Solanum lycopersicum HOM05D003538 ORTHO05D004376 2.6e-21 106.7 236 28.0
Glyma.01G003600 Glycine max HOM05D003538 ORTHO05D004376 5.7e-21 105.5 237 32.5
MD02G1074500 Malus domestica HOM05D003538 ORTHO05D004376 5.7e-21 105.5 239 30.5
Aqoxy7G04069 Aquilegia oxysepala HOM05D003538 ORTHO05D004376 9.8e-21 104.8 210 35.2
AUR62009165 Chenopodium quinoa HOM05D003538 ORTHO05D004376 1.7e-20 104.0 212 33.5
PGSC0003DMG400008432 Solanum tuberosum HOM05D003538 ORTHO05D004376 2.2e-20 103.6 207 30.9
Lj7A278T10 Lonicera japonica HOM05D003538 ORTHO05D004376 4.9e-20 102.4 141 40.4
AUR62022058 Chenopodium quinoa HOM05D003538 ORTHO05D004376 6.3e-20 102.1 212 33.0
AUR62043933 Chenopodium quinoa HOM05D003538 ORTHO05D004376 6.3e-20 102.1 212 33.0
Oeu039611.1 Olea europaea HOM05D003538 ORTHO05D004376 8.3e-20 101.7 208 31.7
CSS0008213 Camellia sinensis var. sinensis HOM05D003538 ORTHO05D004376 1.1e-19 101.3 245 30.6
Cc06_g11090 Coffea canephora HOM05D003538 ORTHO05D004376 1.1e-19 101.3 237 30.4
Thecc.09G092900 Theobroma cacao HOM05D003538 ORTHO05D004376 1.1e-19 101.3 237 31.6
Manes.03G031601 Manihot esculenta HOM05D003538 ORTHO05D004376 1.8e-19 100.5 202 30.7
Actinidia29888 Actinidia chinensis HOM05D003538 ORTHO05D004376 2.4e-19 100.1 238 32.4
Sopen07g015920 Solanum pennellii HOM05D003538 ORTHO05D004376 2.4e-19 100.1 246 28.0
SalBow1G0256 Salvia bowleyana HOM05D003538 ORTHO05D004376 4.1e-19 99.4 208 32.2
Oeu018651.1 Olea europaea HOM05D003538 ORTHO05D004376 1.2e-18 97.8 201 30.3
Manes.03G034901 Manihot esculenta HOM05D003538 ORTHO05D004376 3.5e-18 96.3 202 29.7
MSTRG.11666 Avicennia marina HOM05D003538 ORTHO05D004376 1.0e-17 94.7 139 38.8
VMungo0464G1250 Vigna mungo HOM05D003538 ORTHO05D004376 1.7e-17 94.0 235 29.4
CDE02G0844 Ceratophyllum demersum HOM05D003538 ORTHO05D004376 2.9e-17 93.2 208 33.2
Hund03347 Selenicereus undatus HOM05D003538 ORTHO05D004376 2.9e-17 93.2 212 32.5
Psat6g019320 Pisum sativum HOM05D003538 ORTHO05D004376 3.9e-17 92.8 214 32.7
DCAR_011998 Daucus carota HOM05D003538 ORTHO05D004376 5.0e-17 92.4 224 29.9
AT5G11780 Arabidopsis thaliana HOM05D003538 ORTHO05D004376 6.6e-17 92.0 217 31.3
Thhalv10013348m.g Eutrema salsugineum HOM05D003538 ORTHO05D004376 6.6e-17 92.0 204 32.8
Os01g0600300 Oryza sativa ssp. japonica HOM05D003538 ORTHO05D004376 6.6e-17 92.0 233 28.8
Rhsim03G0234300 Rhododendron simsii HOM05D003538 ORTHO05D004376 1.9e-16 90.5 237 27.8
Eucgr.C03664 Eucalyptus grandis HOM05D003538 ORTHO05D004376 3.3e-16 89.7 137 38.0
SalBow4G1879 Salvia bowleyana HOM05D003538 ORTHO05D004376 3.3e-16 89.7 191 32.5
arahy.Tifrunner.gnm1.ann1.60DKDN Arachis hypogaea HOM05D003538 ORTHO05D004376 5.6e-16 89.0 238 28.6
Phvul.004G172000 Phaseolus vulgaris HOM05D003538 ORTHO05D004376 7.3e-16 88.6 237 28.7
Lj2g0016122 Lotus japonicus HOM05D003538 ORTHO05D004376 9.5e-16 88.2 237 30.0
arahy.Tifrunner.gnm1.ann1.X6QCD5 Arachis hypogaea HOM05D003538 ORTHO05D004376 1.2e-15 87.8 238 28.6
FAN23G1479 Fragaria x ananassa HOM05D003538 ORTHO05D004376 1.6e-15 87.4 195 31.8
Duzib168G1022 Durio zibethinus HOM05D003538 ORTHO05D004376 2.1e-15 87.0 186 33.9
CsaV3_1G040220 Cucumis sativus L. HOM05D003538 ORTHO05D004376 4.7e-15 85.9 191 29.8
CsaV3_UNG062480 Cucumis sativus L. HOM05D003538 ORTHO05D004376 4.7e-15 85.9 191 29.8
Manes.03G047000 Manihot esculenta HOM05D003538 ORTHO05D004376 4.7e-15 85.9 93 48.4
Lalb_Chr24g0393871 Lupinus albus HOM05D003538 ORTHO05D004376 8.0e-15 85.1 198 31.3
DCAR_004434 Daucus carota HOM05D003538 ORTHO05D004376 1.0e-14 84.7 130 40.8
Migut.A00144 Erythranthe guttata HOM05D003538 ORTHO05D004376 1.0e-14 84.7 188 32.4
MSTRG.26404 Avicennia marina HOM05D003538 ORTHO05D004376 1.8e-14 84.0 203 27.6
Carub.0006s1031 Capsella rubella HOM05D003538 ORTHO05D004376 1.8e-14 84.0 224 30.8
HanXRQChr02g0044571 Helianthus annuus HOM05D003538 ORTHO05D004376 1.8e-14 84.0 238 26.9
Ah.11g044700 Amaranthus hybridus HOM05D003538 ORTHO05D004376 4.0e-14 82.8 183 31.7
CARHR201410 Cardamine hirsuta HOM05D003538 ORTHO05D004376 4.0e-14 82.8 210 31.4
CANSAT56G3152 Cannabis sativa HOM05D003538 ORTHO05D004376 5.2e-14 82.4 157 33.1
Oeu021470.1 Olea europaea HOM05D003538 ORTHO05D004376 5.2e-14 82.4 85 42.4
AL6G22530 Arabidopsis lyrata HOM05D003538 ORTHO05D004376 8.9e-14 81.6 214 31.8
MELO3C015449.2 Cucumis melo HOM05D003538 ORTHO05D004376 1.2e-13 81.3 147 32.0
FAN26G3060 Fragaria x ananassa HOM05D003538 ORTHO05D004376 1.2e-13 81.3 192 31.8
FvH4_1g07060 Fragaria vesca HOM05D003538 ORTHO05D004376 1.5e-13 80.9 137 35.8
FAN19G1852 Fragaria x ananassa HOM05D003538 ORTHO05D004376 1.5e-13 80.9 137 35.8
Cc08_g10420 Coffea canephora HOM05D003538 ORTHO05D004376 2.0e-13 80.5 236 26.7
Medtr6g091790 Medicago truncatula HOM05D003538 ORTHO05D004376 2.0e-13 80.5 217 29.5
Thecc.09G052400 Theobroma cacao HOM05D003538 ORTHO05D004376 2.0e-13 80.5 91 46.2
Cpa.g.sc7.246 Carica papaya HOM05D003538 ORTHO05D004376 4.4e-13 79.3 124 36.3
Lsat_1_v5_gn_8_87540 Lactuca sativa HOM05D003538 ORTHO05D004376 4.4e-13 79.3 203 29.1
Lj7A672T62 Lonicera japonica HOM05D003538 ORTHO05D004376 5.8e-13 79.0 170 32.4
Sed0020375 Sechium edule HOM05D003538 ORTHO05D004376 5.8e-13 79.0 107 41.1
ECA236G1610 Erigeron canadensis HOM05D003538 ORTHO05D004376 7.5e-13 78.6 236 27.5
RcHm_v2.0_Chr2g0092961 Rosa chinensis HOM05D003538 ORTHO05D004376 9.8e-13 78.2 112 37.5
A10p25960 Brassica napus HOM05D003538 ORTHO05D004376 2.9e-12 76.6 203 32.0
Gorai.001G010900 Gossypium raimondii HOM05D003538 ORTHO05D004376 2.9e-12 76.6 188 29.3
Sc23g0005570 Simmondsia chinensis HOM05D003538 ORTHO05D004376 2.9e-12 76.6 126 35.7
Gohir.D07G010500 Gossypium hirsutum HOM05D003538 ORTHO05D004376 3.7e-12 76.3 188 29.3
HanXRQChr06g0173831 Helianthus annuus HOM05D003538 ORTHO05D004376 3.7e-12 76.3 109 41.3
Lsat_1_v5_gn_3_24260 Lactuca sativa HOM05D003538 ORTHO05D004376 4.9e-12 75.9 108 38.9
Sopen07g015930 Solanum pennellii HOM05D003538 ORTHO05D004376 8.3e-12 75.1 207 25.6
BraA10t44658Z Brassica rapa HOM05D003538 ORTHO05D004376 1.4e-11 74.3 197 31.5
Zm00001eb161340 Zea mays HOM05D003538 ORTHO05D004376 7.0e-11 72.0 217 29.5
BolC9t59332H Brassica oleracea HOM05D003538 ORTHO05D004376 1.2e-10 71.2 197 30.5
vmacro06276 Vaccinium macrocarpon HOM05D003538 ORTHO05D004376 1.6e-10 70.9 218 28.9
C09p65040 Brassica napus HOM05D003538 ORTHO05D004376 2.0e-10 70.5 197 30.5
ECA246G1935 Erigeron canadensis HOM05D003538 ORTHO05D004376 2.0e-10 70.5 114 36.8
ATR0789G133 Amborella trichopoda HOM05D003538 ORTHO05D004376 4.6e-10 69.3 222 28.4
Gohir.D05G044800 Gossypium hirsutum HOM05D003538 ORTHO05D004376 4.6e-10 69.3 97 40.2
SGA_v2.0_scaffold187G40255 Striga asiatica HOM05D003538 ORTHO05D004376 4.6e-10 69.3 92 38.0
HPP92_009156 Vanilla planifolia HOM05D003538 ORTHO05D004376 7.8e-10 68.6 235 27.7
BcaC04g19195 Brassica carinata HOM05D003538 ORTHO05D004376 1.3e-09 67.8 197 29.9
Sc18g0001870 Simmondsia chinensis HOM05D003538 ORTHO05D004376 1.7e-09 67.4 98 37.8
EL10Ac2g03914 Beta vulgaris HOM05D003538 ORTHO05D004376 3.0e-09 66.6 89 40.4
Medtr6g091900 Medicago truncatula HOM05D003538 ORTHO05D004376 5.0e-09 65.9 84 42.9
Aa31LG3G15420 Aethionema arabicum HOM05D003538 ORTHO05D004376 4.3e-08 62.8 204 27.5


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