Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.G01883 Eucalyptus grandis HOM05D006225 ORTHO05D007676 2.1e-36 155.2 79 100.0
Eucgr.L03301 Eucalyptus grandis HOM05D006225 ORTHO05D007676 2.1e-36 155.2 79 100.0
CiPaw.03G061500 Carya illinoinensis HOM05D006225 ORTHO05D007676 9.6e-26 119.8 79 74.7
QL02p051369 Quercus lobata HOM05D006225 ORTHO05D007676 2.8e-25 118.2 78 74.4
Peaxi162Scf00394g00621 Petunia axillaris HOM05D006225 ORTHO05D007676 6.2e-25 117.1 79 74.7
Prupe.2G152900 Prunus persica HOM05D006225 ORTHO05D007676 1.1e-24 116.3 79 74.7
Actinidia36322 Actinidia chinensis HOM05D006225 ORTHO05D007676 2.4e-24 115.2 79 72.2
FAN10G1546 Fragaria x ananassa HOM05D006225 ORTHO05D007676 3.1e-24 114.8 79 70.9
Sc11g0008330 Simmondsia chinensis HOM05D006225 ORTHO05D007676 3.1e-24 114.8 79 70.9
TWI77G0942 Tripterygium wilfordii HOM05D006225 ORTHO05D007676 3.1e-24 114.8 79 73.4
Ciclev10012061m.g Citrus clementina HOM05D006225 ORTHO05D007676 5.2e-24 114.0 79 69.6
FvH4_7g12860 Fragaria vesca HOM05D006225 ORTHO05D007676 5.2e-24 114.0 79 70.9
FAN06G1752 Fragaria x ananassa HOM05D006225 ORTHO05D007676 5.2e-24 114.0 79 70.9
FAN06G4019 Fragaria x ananassa HOM05D006225 ORTHO05D007676 5.2e-24 114.0 79 70.9
RcHm_v2.0_Chr1g0351941 Rosa chinensis HOM05D006225 ORTHO05D007676 5.2e-24 114.0 79 70.9
PGR042G1089 Punica granatum HOM05D006225 ORTHO05D007676 6.9e-24 113.6 79 74.7
MD02G1195600 Malus domestica HOM05D006225 ORTHO05D007676 9.0e-24 113.2 79 70.9
TAR374G0830 Trochodendron aralioides HOM05D006225 ORTHO05D007676 9.0e-24 113.2 79 72.2
Atru.chr1.1695 Acer truncatum HOM05D006225 ORTHO05D007676 1.5e-23 112.5 79 70.9
Migut.H00218 Erythranthe guttata HOM05D006225 ORTHO05D007676 1.5e-23 112.5 79 72.2
Lalb_Chr06g0174551 Lupinus albus HOM05D006225 ORTHO05D007676 1.5e-23 112.5 79 72.2
FAN03G3320 Fragaria x ananassa HOM05D006225 ORTHO05D007676 2.0e-23 112.1 79 69.6
Cpa.g.sc282.8 Carica papaya HOM05D006225 ORTHO05D007676 2.6e-23 111.7 79 69.6
CANSAT78G2127 Cannabis sativa HOM05D006225 ORTHO05D007676 3.4e-23 111.3 79 68.4
CSS0013578 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 4.4e-23 110.9 79 70.9
CSS0045838 Camellia sinensis var. sinensis HOM05D006225 ORTHO05D007676 4.4e-23 110.9 79 70.9
Lj2g0022404 Lotus japonicus HOM05D006225 ORTHO05D007676 4.4e-23 110.9 79 72.2
Sopen02g030750 Solanum pennellii HOM05D006225 ORTHO05D007676 5.8e-23 110.5 79 73.4
Lj4A191G46 Lonicera japonica HOM05D006225 ORTHO05D007676 7.6e-23 110.2 80 71.2
Cc07_g08810 Coffea canephora HOM05D006225 ORTHO05D007676 9.9e-23 109.8 79 70.9
Sabra17G0095400 Salix brachista HOM05D006225 ORTHO05D007676 1.7e-22 109.0 79 68.4
Glyma.13G045900 Glycine max HOM05D006225 ORTHO05D007676 2.9e-22 108.2 79 69.6
COL.COLO4_09333 Corchorus olitorius HOM05D006225 ORTHO05D007676 3.8e-22 107.8 79 65.8
Potri.017G115200 Populus trichocarpa HOM05D006225 ORTHO05D007676 3.8e-22 107.8 79 68.4
SalBow3G1182 Salvia bowleyana HOM05D006225 ORTHO05D007676 3.8e-22 107.8 74 71.6
GSVIVG01031021001 Vitis vinifera HOM05D006225 ORTHO05D007676 3.8e-22 107.8 79 72.2
SGA_v2.0_scaffold33G13506 Striga asiatica HOM05D006225 ORTHO05D007676 6.4e-22 107.1 79 72.2
Lsat_1_v5_gn_2_79301 Lactuca sativa HOM05D006225 ORTHO05D007676 1.4e-21 105.9 79 64.6
Medtr6g018620 Medicago truncatula HOM05D006225 ORTHO05D007676 3.2e-21 104.8 79 65.8
Thecc.04G133700 Theobroma cacao HOM05D006225 ORTHO05D007676 4.2e-21 104.4 79 63.3
Glyma.19G049100 Glycine max HOM05D006225 ORTHO05D007676 7.1e-21 103.6 79 67.1
HanXRQChr14g0438471 Helianthus annuus HOM05D006225 ORTHO05D007676 9.3e-21 103.2 79 60.8
Psat1g081360 Pisum sativum HOM05D006225 ORTHO05D007676 9.3e-21 103.2 79 64.6
TPR.G32473 Trifolium pratense HOM05D006225 ORTHO05D007676 1.2e-20 102.8 79 67.1
Gohir.A12G053700 Gossypium hirsutum HOM05D006225 ORTHO05D007676 1.6e-20 102.4 79 63.3
Gohir.D12G052400 Gossypium hirsutum HOM05D006225 ORTHO05D007676 1.6e-20 102.4 79 63.3
Gorai.008G055500 Gossypium raimondii HOM05D006225 ORTHO05D007676 1.6e-20 102.4 79 63.3
VMungo0464G1087 Vigna mungo HOM05D006225 ORTHO05D007676 1.6e-20 102.4 79 68.4
ECA238G0211 Erigeron canadensis HOM05D006225 ORTHO05D007676 2.1e-20 102.1 79 63.3
AUR62023301 Chenopodium quinoa HOM05D006225 ORTHO05D007676 4.6e-20 100.9 80 65.0
Ca_13730_v3 Cicer arietinum L. HOM05D006225 ORTHO05D007676 4.6e-20 100.9 79 63.3
Phvul.004G065800 Phaseolus vulgaris HOM05D006225 ORTHO05D007676 6.0e-20 100.5 79 67.1
Manes.02G068700 Manihot esculenta HOM05D006225 ORTHO05D007676 1.0e-19 99.8 80 67.5
THA.LOC104823860 Tarenaya hassleriana HOM05D006225 ORTHO05D007676 1.3e-19 99.4 74 66.2
ClCG05G011660 Citrullus lanatus HOM05D006225 ORTHO05D007676 1.7e-19 99.0 79 64.6
CsaV3_3G020710 Cucumis sativus L. HOM05D006225 ORTHO05D007676 1.7e-19 99.0 79 64.6
Zm00001eb360540 Zea mays HOM05D006225 ORTHO05D007676 3.9e-19 97.8 79 59.5
Sed0021803 Sechium edule HOM05D006225 ORTHO05D007676 5.1e-19 97.4 79 63.3
PSO063G1031 Papaver somniferum HOM05D006225 ORTHO05D007676 1.5e-18 95.9 77 64.9
PSO782G1071 Papaver somniferum HOM05D006225 ORTHO05D007676 1.5e-18 95.9 77 64.9
Os07g0283200 Oryza sativa ssp. japonica HOM05D006225 ORTHO05D007676 3.3e-18 94.7 79 58.2
BcaB02g08011 Brassica carinata HOM05D006225 ORTHO05D007676 4.3e-18 94.4 77 61.0
SEGI_09013 Sequoiadendron giganteum HOM05D006225 ORTHO05D007676 5.6e-18 94.0 79 58.2
ATR1125G113 Amborella trichopoda HOM05D006225 ORTHO05D007676 9.6e-18 93.2 79 58.2
Zm00001eb156340 Zea mays HOM05D006225 ORTHO05D007676 9.6e-18 93.2 79 55.7
Aa31LG9G17110 Aethionema arabicum HOM05D006225 ORTHO05D007676 2.8e-17 91.7 76 57.9
Thhalv10027811m.g Eutrema salsugineum HOM05D006225 ORTHO05D007676 3.6e-17 91.3 77 58.4
BcaB06g27198 Brassica carinata HOM05D006225 ORTHO05D007676 4.8e-17 90.9 77 59.7
A04p11390 Brassica napus HOM05D006225 ORTHO05D007676 4.8e-17 90.9 77 59.7
C04p45020 Brassica napus HOM05D006225 ORTHO05D007676 4.8e-17 90.9 77 59.7
BolC4t26080H Brassica oleracea HOM05D006225 ORTHO05D007676 4.8e-17 90.9 77 59.7
BraA04t16801Z Brassica rapa HOM05D006225 ORTHO05D007676 4.8e-17 90.9 77 59.7
CARHR214220 Cardamine hirsuta HOM05D006225 ORTHO05D007676 4.8e-17 90.9 77 57.1
Carub.0007s3769 Capsella rubella HOM05D006225 ORTHO05D007676 6.2e-17 90.5 77 58.4
unitig_0.g7 Utricularia gibba HOM05D006225 ORTHO05D007676 8.1e-17 90.1 77 59.7
AUR62009001 Chenopodium quinoa HOM05D006225 ORTHO05D007676 1.1e-16 89.7 98 53.1
Hund13715 Selenicereus undatus HOM05D006225 ORTHO05D007676 1.1e-16 89.7 62 71.0
BcaC02g09645 Brassica carinata HOM05D006225 ORTHO05D007676 1.8e-16 89.0 77 58.4
Sp7g03650 Schrenkiella parvula HOM05D006225 ORTHO05D007676 3.1e-16 88.2 60 70.0
AL7G52230 Arabidopsis lyrata HOM05D006225 ORTHO05D007676 9.0e-16 86.7 60 68.3
AT5G38380 Arabidopsis thaliana HOM05D006225 ORTHO05D007676 2.6e-15 85.1 60 68.3
Aqoxy3G03957 Aquilegia oxysepala HOM05D006225 ORTHO05D007676 1.7e-14 82.4 51 76.5
CDE02G4721 Ceratophyllum demersum HOM05D006225 ORTHO05D007676 6.4e-14 80.5 79 54.4
HPP92_020146 Vanilla planifolia HOM05D006225 ORTHO05D007676 6.4e-14 80.5 79 55.7
Nn4g23886 Nelumbo nucifera HOM05D006225 ORTHO05D007676 1.4e-13 79.3 43 88.4
Nitab4.5_0000659g0030 Nicotiana tabacum HOM05D006225 ORTHO05D007676 2.4e-13 78.6 42 90.5
Nitab4.5_0000912g0210 Nicotiana tabacum HOM05D006225 ORTHO05D007676 2.4e-13 78.6 42 90.5
Cfa007923 Carpinus fangiana HOM05D006225 ORTHO05D010559 2.7e-12 75.1 42 83.3
Oeu030786.4 Olea europaea HOM05D006225 ORTHO05D007676 6.0e-12 73.9 43 81.4
PGSC0003DMG400026393 Solanum tuberosum HOM05D006225 ORTHO05D007676 1.0e-11 73.2 43 81.4
Solyc02g086060.4 Solanum lycopersicum HOM05D006225 ORTHO05D007676 1.3e-11 72.8 43 79.1
EL10Ac2g04565 Beta vulgaris HOM05D006225 ORTHO05D007676 1.1e-10 69.7 43 74.4
Rhsim10G0067300 Rhododendron simsii HOM05D006225 ORTHO05D007676 3.3e-10 68.2 41 75.6
vmacro05555 Vaccinium macrocarpon HOM05D006225 ORTHO05D007676 6.9e-08 60.5 101 42.6
Pp3c6_6620 Physcomitrium patens HOM05D006225 ORTHO05D007676 9.0e-08 60.1 80 46.2
Mapoly0135s0006 Marchantia polymorpha HOM05D006225 ORTHO05D007676 9.9e-07 56.6 50 52.0
MD07G1125400 Malus domestica HOM05D006225 ORTHO05D007676 1.7e-06 55.8 49 55.1


User provided reference genes

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