Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L03135 Eucalyptus grandis HOM05D006119 ORTHO05D007641 1.5e-74 282.7 138 100.0
Eucgr.C02591 Eucalyptus grandis HOM05D006119 ORTHO05D007641 3.7e-73 278.1 138 97.8
PGR102G3064 Punica granatum HOM05D006119 ORTHO05D007641 9.4e-45 183.7 109 77.1
QL02p092825 Quercus lobata HOM05D006119 ORTHO05D007641 4.7e-44 181.4 109 73.4
Cfa020842 Carpinus fangiana HOM05D006119 ORTHO05D007641 8.0e-44 180.6 110 73.6
Haze_19227 Corylus avellana HOM05D006119 ORTHO05D007641 8.0e-44 180.6 110 73.6
Manes.06G037000 Manihot esculenta HOM05D006119 ORTHO05D007641 3.0e-43 178.7 112 71.4
CiPaw.15G174900 Carya illinoinensis HOM05D006119 ORTHO05D007641 8.8e-43 177.2 110 72.7
Potri.006G186500 Populus trichocarpa HOM05D006119 ORTHO05D007641 1.8e-40 169.5 112 67.9
Lsat_1_v5_gn_5_91501 Lactuca sativa HOM05D006119 ORTHO05D007641 1.2e-39 166.8 110 66.4
SGA_v2.0_scaffold206G41813 Striga asiatica HOM05D006119 ORTHO05D007641 1.2e-39 166.8 112 67.0
Sabra18G0092300 Salix brachista HOM05D006119 ORTHO05D007641 2.7e-39 165.6 112 66.1
TAR625G1054 Trochodendron aralioides HOM05D006119 ORTHO05D007641 4.5e-39 164.9 108 68.5
Aa31LG3G13820 Aethionema arabicum HOM05D006119 ORTHO05D007641 5.9e-39 164.5 108 68.5
Potri.018G109400 Populus trichocarpa HOM05D006119 ORTHO05D007641 7.7e-39 164.1 112 66.1
AL8G34100 Arabidopsis lyrata HOM05D006119 ORTHO05D007641 1.0e-38 163.7 108 66.7
AT5G58005 Arabidopsis thaliana HOM05D006119 ORTHO05D007641 1.0e-38 163.7 108 66.7
Thecc.09G032800 Theobroma cacao HOM05D006119 ORTHO05D007641 1.3e-38 163.3 112 66.1
Migut.K00337 Erythranthe guttata HOM05D006119 ORTHO05D007641 2.9e-38 162.2 112 66.1
Carub.0008s1855 Capsella rubella HOM05D006119 ORTHO05D007641 3.8e-38 161.8 108 65.7
Lj4g0015042 Lotus japonicus HOM05D006119 ORTHO05D007641 3.8e-38 161.8 108 69.4
TAR626G1228 Trochodendron aralioides HOM05D006119 ORTHO05D007641 3.8e-38 161.8 107 66.4
MBI15_g26716_MAGBIO Magnolia biondii HOM05D006119 ORTHO05D007641 5.0e-38 161.4 109 68.8
CARHR271810 Cardamine hirsuta HOM05D006119 ORTHO05D007641 6.5e-38 161.0 108 64.8
ATR0739G093 Amborella trichopoda HOM05D006119 ORTHO05D007641 8.5e-38 160.6 102 72.5
Ciclev10009941m.g Citrus clementina HOM05D006119 ORTHO05D007641 1.5e-37 159.8 112 67.0
Gorai.009G055300 Gossypium raimondii HOM05D006119 ORTHO05D007641 1.5e-37 159.8 112 63.4
RhsimUnG0039700 Rhododendron simsii HOM05D006119 ORTHO05D007641 1.5e-37 159.8 103 68.9
BcaB01g04471 Brassica carinata HOM05D006119 ORTHO05D007641 1.9e-37 159.5 110 64.5
C03p14650 Brassica napus HOM05D006119 ORTHO05D007641 1.9e-37 159.5 110 64.5
FAN19G0026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 1.9e-37 159.5 111 64.0
arahy.Tifrunner.gnm1.ann1.TAM15G Arachis hypogaea HOM05D006119 ORTHO05D007641 2.5e-37 159.1 109 66.1
FvH4_1g01100 Fragaria vesca HOM05D006119 ORTHO05D007641 2.5e-37 159.1 110 64.5
Hund00673 Selenicereus undatus HOM05D006119 ORTHO05D007641 2.5e-37 159.1 110 67.3
ClCG06G012280 Citrullus lanatus HOM05D006119 ORTHO05D007641 3.2e-37 158.7 115 65.2
FAN26G3335 Fragaria x ananassa HOM05D006119 ORTHO05D007641 3.2e-37 158.7 110 64.5
FAN28G1026 Fragaria x ananassa HOM05D006119 ORTHO05D007641 4.2e-37 158.3 110 64.5
Oeu038007.1 Olea europaea HOM05D006119 ORTHO05D007641 4.2e-37 158.3 112 63.4
arahy.Tifrunner.gnm1.ann1.I28AR0 Arachis hypogaea HOM05D006119 ORTHO05D007641 5.5e-37 157.9 108 65.7
TWI63G1376 Tripterygium wilfordii HOM05D006119 ORTHO05D007641 5.5e-37 157.9 96 74.0
Thhalv10015049m.g Eutrema salsugineum HOM05D006119 ORTHO05D007641 7.2e-37 157.5 108 64.8
FAN23G1211 Fragaria x ananassa HOM05D006119 ORTHO05D007641 7.2e-37 157.5 110 63.6
Manes.14G112500 Manihot esculenta HOM05D006119 ORTHO05D007641 7.2e-37 157.5 102 72.5
Ca_21116_v3 Cicer arietinum L. HOM05D006119 ORTHO05D007641 1.6e-36 156.4 105 67.6
ECA234G1280 Erigeron canadensis HOM05D006119 ORTHO05D007641 2.1e-36 156.0 105 67.6
Hma1.2p1_0028F.1_g017420 Hydrangea macrophylla HOM05D006119 ORTHO05D007641 2.7e-36 155.6 108 63.9
Glyma.02G202700 Glycine max HOM05D006119 ORTHO05D007641 3.6e-36 155.2 97 71.1
Prupe.7G260900 Prunus persica HOM05D006119 ORTHO05D007641 3.6e-36 155.2 97 72.2
CSS0002774 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 8.0e-36 154.1 108 63.0
CSS0027400 Camellia sinensis var. sinensis HOM05D006119 ORTHO05D007641 8.0e-36 154.1 108 63.0
Peaxi162Scf00347g01022 Petunia axillaris HOM05D006119 ORTHO05D007641 8.0e-36 154.1 102 67.6
Lalb_Chr07g0179791 Lupinus albus HOM05D006119 ORTHO05D007641 1.0e-35 153.7 97 70.1
Sed0003082 Sechium edule HOM05D006119 ORTHO05D007641 1.0e-35 153.7 113 63.7
Cpa.g.sc46.139 Carica papaya HOM05D006119 ORTHO05D007641 1.4e-35 153.3 97 72.2
A03p12450 Brassica napus HOM05D000882 ORTHO05D001142 1.8e-35 152.9 100 68.0
BolC3t13907H Brassica oleracea HOM05D000882 ORTHO05D001142 1.8e-35 152.9 100 68.0
BraA03t10560Z Brassica rapa HOM05D000882 ORTHO05D001142 1.8e-35 152.9 100 68.0
CDE05G1219 Ceratophyllum demersum HOM05D006119 ORTHO05D007641 3.0e-35 152.1 108 62.0
MD15G1154500 Malus domestica HOM05D006119 ORTHO05D007641 3.0e-35 152.1 97 72.2
GSVIVG01023584001 Vitis vinifera HOM05D006119 ORTHO05D007641 3.0e-35 152.1 97 68.0
MELO3C029440.2 Cucumis melo HOM05D006119 ORTHO05D007641 6.8e-35 151.0 124 61.3
PSO111G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 2.0e-34 149.4 108 62.0
Atru.chr7.85 Acer truncatum HOM05D006119 ORTHO05D007641 2.6e-34 149.1 111 62.2
Sopen07g001370 Solanum pennellii HOM05D006119 ORTHO05D007641 2.6e-34 149.1 112 59.8
Sopen12g005020 Solanum pennellii HOM05D006119 ORTHO05D007641 2.6e-34 149.1 97 68.0
Solyc07g005410.3 Solanum lycopersicum HOM05D006119 ORTHO05D007641 3.4e-34 148.7 112 59.8
Oeu021261.1 Olea europaea HOM05D006119 ORTHO05D007641 9.8e-34 147.1 114 60.5
Psat0ss6646g0160 Pisum sativum HOM05D006119 ORTHO05D007641 9.8e-34 147.1 102 68.6
HPP92_017474 Vanilla planifolia HOM05D006119 ORTHO05D007641 9.8e-34 147.1 98 68.4
Solyc12g010150.3 Solanum lycopersicum HOM05D006119 ORTHO05D007641 1.3e-33 146.7 96 67.7
Nn8g39847 Nelumbo nucifera HOM05D006119 ORTHO05D007641 1.7e-33 146.4 97 67.0
TPR.G39188 Trifolium pratense HOM05D006119 ORTHO05D007641 2.2e-33 146.0 119 60.5
COL.COLO4_18789 Corchorus olitorius HOM05D006119 ORTHO05D007641 2.8e-33 145.6 103 62.1
Duzib187G0693 Durio zibethinus HOM05D006119 ORTHO05D007641 2.8e-33 145.6 97 67.0
Os08g0441400 Oryza sativa ssp. japonica HOM05D006119 ORTHO05D007641 2.8e-33 145.6 98 69.4
Actinidia04288 Actinidia chinensis HOM05D006119 ORTHO05D007641 3.7e-33 145.2 97 64.9
MD02G1009100 Malus domestica HOM05D006119 ORTHO05D007641 3.7e-33 145.2 97 70.1
PSO561G0054 Papaver somniferum HOM05D006119 ORTHO05D007641 3.7e-33 145.2 108 61.1
Peaxi162Scf00062g00419 Petunia axillaris HOM05D006119 ORTHO05D007641 3.7e-33 145.2 97 67.0
Rhsim01G0035400 Rhododendron simsii HOM05D006119 ORTHO05D007641 3.7e-33 145.2 92 69.6
vmacro06086 Vaccinium macrocarpon HOM05D006119 ORTHO05D007641 3.7e-33 145.2 119 57.1
RcHm_v2.0_Chr2g0085901 Rosa chinensis HOM05D006119 ORTHO05D007641 4.9e-33 144.8 101 65.3
PGSC0003DMG400007897 Solanum tuberosum HOM05D006119 ORTHO05D007641 6.3e-33 144.4 97 64.9
Zm00001eb041130 Zea mays HOM05D006119 ORTHO05D007641 6.3e-33 144.4 98 65.3
Gohir.A05G052000 Gossypium hirsutum HOM05D006119 ORTHO05D007641 1.1e-32 143.7 97 64.9
Gohir.D05G053500 Gossypium hirsutum HOM05D006119 ORTHO05D007641 1.4e-32 143.3 97 64.9
MSTRG.26287 Avicennia marina HOM05D006119 ORTHO05D007641 2.4e-32 142.5 97 66.0
CANSAT11G0807 Cannabis sativa HOM05D006119 ORTHO05D007641 2.4e-32 142.5 97 62.9
CsaV3_1G028790 Cucumis sativus L. HOM05D006119 ORTHO05D007641 4.1e-32 141.7 101 66.3
Nitab4.5_0004815g0030 Nicotiana tabacum HOM05D006119 ORTHO05D007641 4.1e-32 141.7 132 52.3
Medtr4g131150 Medicago truncatula HOM05D006119 ORTHO05D007641 7.0e-32 141.0 110 60.0
Dinv42873 Davidia involucrata HOM05D006119 ORTHO05D007641 9.1e-32 140.6 97 63.9
Dinv43227 Davidia involucrata HOM05D006119 ORTHO05D007641 9.1e-32 140.6 97 63.9
Phvul.003G157000 Phaseolus vulgaris HOM05D006119 ORTHO05D007641 1.2e-31 140.2 95 65.3
Cc06_g15170 Coffea canephora HOM05D006119 ORTHO05D007641 1.6e-31 139.8 97 62.9
Rhsim03G0256600 Rhododendron simsii HOM05D006119 ORTHO05D007641 2.7e-31 139.0 124 55.6
AUR62043251 Chenopodium quinoa HOM05D006119 ORTHO05D007641 3.5e-31 138.7 107 60.7
Actinidia23551 Actinidia chinensis HOM05D006119 ORTHO05D007641 4.5e-31 138.3 108 59.3
Aqoxy7G03440 Aquilegia oxysepala HOM05D006119 ORTHO05D007641 4.5e-31 138.3 98 64.3
Sc18g0007620 Simmondsia chinensis HOM05D006119 ORTHO05D007641 4.5e-31 138.3 88 69.3
unitig_899.g15448 Utricularia gibba HOM05D006119 ORTHO05D007641 5.9e-31 137.9 89 68.5
Nitab4.5_0006408g0020 Nicotiana tabacum HOM05D006119 ORTHO05D007641 1.0e-30 137.1 89 66.3
SalBow1G1238 Salvia bowleyana HOM05D006119 ORTHO05D007641 1.0e-30 137.1 97 62.9
CAN.G1116.12 Capsicum annuum HOM05D006119 ORTHO05D007641 7.2e-29 131.0 99 59.6
Actinidia38675 Actinidia chinensis HOM05D006119 ORTHO05D007641 8.0e-28 127.5 89 64.0
Sed0018834 Sechium edule HOM05D006119 ORTHO05D007641 4.0e-27 125.2 86 65.1
Glyma.17G075100 Glycine max HOM05D006119 ORTHO05D007641 5.2e-27 124.8 84 70.2
Nitab4.5_0001813g0020 Nicotiana tabacum HOM05D006119 ORTHO05D007641 5.2e-27 124.8 98 56.1
DCAR_020878 Daucus carota HOM05D006119 ORTHO05D007641 6.8e-27 124.4 81 70.4
PGSC0003DMG400011173 Solanum tuberosum HOM05D006119 ORTHO05D007641 8.9e-27 124.0 89 60.7
HanXRQChr10g0314681 Helianthus annuus HOM05D006119 ORTHO05D007641 1.5e-26 123.2 105 52.4
EL10Ac8g18851 Beta vulgaris HOM05D006119 ORTHO05D007641 2.0e-26 122.9 92 58.7
Nitab4.5_0002315g0130 Nicotiana tabacum HOM05D006119 ORTHO05D007641 7.5e-26 120.9 103 55.3
Pp3c18_18500 Physcomitrium patens HOM05D006119 ORTHO05D007641 8.3e-25 117.5 103 55.3
Nitab4.5_0001478g0060 Nicotiana tabacum HOM05D006119 ORTHO05D007641 1.1e-24 117.1 103 54.4
Nitab4.5_0013449g0010 Nicotiana tabacum HOM05D006119 ORTHO05D007641 2.0e-23 112.8 93 54.8
Sp6g19680 Schrenkiella parvula HOM05D006119 ORTHO05D007641 5.0e-22 108.2 74 64.9
Mapoly0012s0137 Marchantia polymorpha HOM05D006119 ORTHO05D007641 3.3e-21 105.5 87 57.5
Pp3c21_10430 Physcomitrium patens HOM05D006119 ORTHO05D007641 5.6e-21 104.8 101 50.5
CAN.G551.35 Capsicum annuum HOM05D006119 ORTHO05D007641 9.5e-21 104.0 67 67.2
SMO137G0238 Selaginella moellendorffii HOM05D006119 ORTHO05D007641 1.2e-20 103.6 93 52.7
SEGI_38164 Sequoiadendron giganteum HOM05D006119 ORTHO05D007641 1.4e-19 100.1 66 65.2
AagrBONN_evm.TU.Sc2ySwM_228.1886 Anthoceros agrestis HOM05D006119 ORTHO05D007641 4.9e-17 91.7 64 62.5
Aqoxy4G01852 Aquilegia oxysepala HOM05D006119 ORTHO05D007641 8.3e-17 90.9 63 61.9
CDE05G1090 Ceratophyllum demersum HOM05D006119 ORTHO05D007641 9.2e-16 87.4 64 60.9
BcaNung07255 Brassica carinata HOM05D000882 ORTHO05D001142 1.6e-15 86.7 59 61.0
MBI15_g07754_MAGBIO Magnolia biondii HOM05D006119 ORTHO05D007641 2.1e-12 76.3 65 63.1
Nitab4.5_0003612g0050 Nicotiana tabacum HOM05D006119 ORTHO05D007641 3.6e-12 75.5 60 56.7
Rhsim04G0128900 Rhododendron simsii HOM05D002149 ORTHO05D002154 8.3e-09 64.3 40 72.5
Pp3c22_3250 Physcomitrium patens HOM05D006119 ORTHO05D007641 1.4e-08 63.5 69 44.9
PSO339G5888 Papaver somniferum HOM05D006119 ORTHO05D007641 3.2e-08 62.4 78 39.7


User provided reference genes

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