Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L03082 Eucalyptus grandis HOM05D006393 ORTHO05D008088 7.7e-62 240.4 125 100.0
Eucgr.C04142 Eucalyptus grandis HOM05D006393 ORTHO05D008088 7.0e-55 217.2 135 85.9
Haze_25669 Corylus avellana HOM05D006393 ORTHO05D008088 2.7e-43 178.7 130 70.8
Cfa003299 Carpinus fangiana HOM05D006393 ORTHO05D008088 8.0e-43 177.2 130 69.2
QL02p086364 Quercus lobata HOM05D006393 ORTHO05D008088 4.0e-42 174.9 130 66.9
Duzib168G1441 Durio zibethinus HOM05D006393 ORTHO05D008088 1.5e-41 172.9 135 65.2
PGR102G0276 Punica granatum HOM05D006393 ORTHO05D008088 3.4e-41 171.8 130 69.2
ClCG06G010490 Citrullus lanatus HOM05D006393 ORTHO05D008088 5.7e-41 171.0 131 64.9
TWI34G1546 Tripterygium wilfordii HOM05D006393 ORTHO05D008088 5.7e-41 171.0 130 66.2
MELO3C025307.2 Cucumis melo HOM05D006393 ORTHO05D008088 1.3e-40 169.9 131 64.1
Manes.16G064200 Manihot esculenta HOM05D006393 ORTHO05D008088 2.2e-40 169.1 130 65.4
Prupe.7G235100 Prunus persica HOM05D006393 ORTHO05D008088 2.2e-40 169.1 130 66.2
Atru.chr7.1280 Acer truncatum HOM05D006393 ORTHO05D008088 2.8e-40 168.7 135 63.7
COL.COLO4_34948 Corchorus olitorius HOM05D006393 ORTHO05D008088 6.3e-40 167.5 130 65.4
Sed0023374 Sechium edule HOM05D006393 ORTHO05D008088 8.3e-40 167.2 131 61.1
Thecc.09G116800 Theobroma cacao HOM05D006393 ORTHO05D008088 1.1e-39 166.8 135 65.9
Gohir.D06G058100 Gossypium hirsutum HOM05D006393 ORTHO05D008088 1.8e-39 166.0 135 65.2
FvH4_1g04221 Fragaria vesca HOM05D006393 ORTHO05D008088 2.4e-39 165.6 132 63.6
Nn8g39292 Nelumbo nucifera HOM05D006393 ORTHO05D008088 3.1e-39 165.2 131 64.1
vmacro20677 Vaccinium macrocarpon HOM05D006393 ORTHO05D008088 3.1e-39 165.2 133 62.4
Gorai.010G068300 Gossypium raimondii HOM05D006393 ORTHO05D008088 4.1e-39 164.9 135 65.2
RcHm_v2.0_Chr2g0089771 Rosa chinensis HOM05D006393 ORTHO05D008088 4.1e-39 164.9 132 62.9
CiPaw.03G236400 Carya illinoinensis HOM05D006393 ORTHO05D008088 5.4e-39 164.5 131 63.4
CsaV3_1G030940 Cucumis sativus L. HOM05D006393 ORTHO05D008088 9.1e-39 163.7 130 63.8
Actinidia09396 Actinidia chinensis HOM05D006393 ORTHO05D008088 1.6e-38 162.9 131 64.1
Aqoxy7G01879 Aquilegia oxysepala HOM05D006393 ORTHO05D008088 2.7e-38 162.2 130 60.0
AT5G19930 Arabidopsis thaliana HOM05D006393 ORTHO05D008088 2.7e-38 162.2 124 61.3
MD02G1061500 Malus domestica HOM05D006393 ORTHO05D008088 2.7e-38 162.2 130 60.8
THA.LOC104815111 Tarenaya hassleriana HOM05D006393 ORTHO05D008088 5.9e-38 161.0 135 60.7
AL6G31460 Arabidopsis lyrata HOM05D006393 ORTHO05D008088 7.7e-38 160.6 125 60.8
Carub.0006s1830 Capsella rubella HOM05D006393 ORTHO05D008088 1.3e-37 159.8 135 57.0
Ciclev10008889m.g Citrus clementina HOM05D006393 ORTHO05D008088 1.7e-37 159.5 132 61.4
Sp6g24450 Schrenkiella parvula HOM05D006393 ORTHO05D008088 1.7e-37 159.5 135 57.8
Cpa.g.sc23.161 Carica papaya HOM05D006393 ORTHO05D008088 2.3e-37 159.1 130 60.8
Gohir.A06G059900 Gossypium hirsutum HOM05D006393 ORTHO05D008088 2.3e-37 159.1 135 62.2
Aa31LG9G6050 Aethionema arabicum HOM05D006393 ORTHO05D008088 3.8e-37 158.3 135 57.8
Thhalv10014278m.g Eutrema salsugineum HOM05D006393 ORTHO05D008088 3.8e-37 158.3 124 59.7
Hund09172 Selenicereus undatus HOM05D006393 ORTHO05D008088 3.8e-37 158.3 135 58.5
Rhsim01G0090600 Rhododendron simsii HOM05D006393 ORTHO05D008088 5.0e-37 157.9 132 62.1
MBI01_g13571_MAGBIO Magnolia biondii HOM05D006393 ORTHO05D008088 6.5e-37 157.5 126 61.9
BcaB08g36553 Brassica carinata HOM05D006393 ORTHO05D008088 1.9e-36 156.0 124 61.3
PSO782G0281 Papaver somniferum HOM05D006393 ORTHO05D008088 1.9e-36 156.0 128 60.9
Potri.018G073000 Populus trichocarpa HOM05D006393 ORTHO05D008088 1.9e-36 156.0 130 59.2
GSVIVG01015453001 Vitis vinifera HOM05D006393 ORTHO05D008088 2.5e-36 155.6 129 60.5
Oeu046267.2 Olea europaea HOM05D006393 ORTHO05D008088 4.2e-36 154.8 131 59.5
CSS0031330 Camellia sinensis var. sinensis HOM05D006393 ORTHO05D008088 5.5e-36 154.5 132 59.8
AUR62033415 Chenopodium quinoa HOM05D006393 ORTHO05D008088 7.2e-36 154.1 130 60.8
A10p19800 Brassica napus HOM05D006393 ORTHO05D008088 9.5e-36 153.7 124 60.5
BcaC04g19399 Brassica carinata HOM05D006393 ORTHO05D008088 1.2e-35 153.3 124 59.7
C09p56120 Brassica napus HOM05D006393 ORTHO05D008088 1.2e-35 153.3 124 59.7
BolC9t58479H Brassica oleracea HOM05D006393 ORTHO05D008088 1.2e-35 153.3 124 59.7
BraA10t44056Z Brassica rapa HOM05D006393 ORTHO05D008088 1.6e-35 152.9 124 59.7
Oeu027539.2 Olea europaea HOM05D006393 ORTHO05D008088 3.6e-35 151.8 131 58.8
Hma1.2p1_0018F.1_g013070 Hydrangea macrophylla HOM05D006393 ORTHO05D008088 1.0e-34 150.2 132 60.6
EL10Ac8g18557 Beta vulgaris HOM05D006393 ORTHO05D008088 1.4e-34 149.8 132 58.3
Solyc10g079970.2 Solanum lycopersicum HOM05D006393 ORTHO05D008088 1.8e-34 149.4 131 55.7
Sopen10g030590 Solanum pennellii HOM05D006393 ORTHO05D008088 3.0e-34 148.7 131 55.7
Os01g0507300 Oryza sativa ssp. japonica HOM05D006393 ORTHO05D008088 5.2e-34 147.9 126 57.1
PGSC0003DMG401029823 Solanum tuberosum HOM05D006393 ORTHO05D008088 5.2e-34 147.9 131 55.7
Zm00001eb106640 Zea mays HOM05D006393 ORTHO05D008088 5.2e-34 147.9 126 58.7
Ah.14g081310 Amaranthus hybridus HOM05D006393 ORTHO05D008088 6.8e-34 147.5 129 58.1
SGA_v2.0_scaffold92G28235 Striga asiatica HOM05D006393 ORTHO05D008088 8.9e-34 147.1 131 57.3
MSTRG.1197 Avicennia marina HOM05D006393 ORTHO05D008088 1.5e-33 146.4 132 57.6
CAN.G1665.6 Capsicum annuum HOM05D006393 ORTHO05D008088 1.5e-33 146.4 131 55.7
Migut.C00826 Erythranthe guttata HOM05D006393 ORTHO05D008088 1.5e-33 146.4 131 55.0
Nitab4.5_0002551g0020 Nicotiana tabacum HOM05D006393 ORTHO05D008088 1.5e-33 146.4 131 56.5
unitig_37.g13035 Utricularia gibba HOM05D006393 ORTHO05D008088 2.0e-33 146.0 132 56.8
DCAR_010438 Daucus carota HOM05D006393 ORTHO05D008088 2.6e-33 145.6 130 53.1
CDE06G0973 Ceratophyllum demersum HOM05D006393 ORTHO05D008088 9.8e-33 143.7 131 55.7
arahy.Tifrunner.gnm1.ann1.3AE437 Arachis hypogaea HOM05D006393 ORTHO05D008088 2.2e-32 142.5 125 60.0
HanXRQChr03g0062141 Helianthus annuus HOM05D006393 ORTHO05D008088 2.8e-32 142.1 129 55.0
Lalb_Chr13g0302251 Lupinus albus HOM05D006393 ORTHO05D008088 1.4e-31 139.8 129 55.8
arahy.Tifrunner.gnm1.ann1.RZM4QH Arachis hypogaea HOM05D006393 ORTHO05D008088 2.4e-31 139.0 128 57.0
CDE07G1479 Ceratophyllum demersum HOM05D006393 ORTHO05D008088 2.4e-31 139.0 131 52.7
Psat4g042480 Pisum sativum HOM05D006393 ORTHO05D008088 3.1e-31 138.7 129 58.1
TPR.G26762 Trifolium pratense HOM05D006393 ORTHO05D008088 3.1e-31 138.7 129 57.4
VMungo1215G0586 Vigna mungo HOM05D006393 ORTHO05D008088 5.4e-31 137.9 128 58.6
Ca_21724_v3 Cicer arietinum L. HOM05D006393 ORTHO05D008088 7.0e-31 137.5 128 58.6
Glyma.17G120200 Glycine max HOM05D006393 ORTHO05D008088 7.0e-31 137.5 129 58.9
Lj4g0026371 Lotus japonicus HOM05D006393 ORTHO05D008088 9.2e-31 137.1 128 57.8
HPP92_009792 Vanilla planifolia HOM05D006393 ORTHO05D008088 4.5e-30 134.8 130 53.8
Eucgr.E03680 Eucalyptus grandis HOM05D006393 ORTHO05D008088 5.9e-30 134.4 98 78.6
ATR0083G026 Amborella trichopoda HOM05D006393 ORTHO05D008088 7.8e-30 134.0 125 53.6
HPP92_008697 Vanilla planifolia HOM05D006393 ORTHO05D008088 1.0e-29 133.7 126 51.6
Medtr4g112990 Medicago truncatula HOM05D006393 ORTHO05D008088 1.3e-29 133.3 129 51.9
SEGI_37175 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 1.3e-29 133.3 129 52.7
Phvul.003G159300 Phaseolus vulgaris HOM05D006393 ORTHO05D008088 2.3e-29 132.5 128 54.7
Sabra18G0063700 Salix brachista HOM05D006393 ORTHO05D008088 1.5e-28 129.8 132 50.0
Zm00001eb122440 Zea mays HOM05D006393 ORTHO05D008088 1.2e-27 126.7 119 54.6
FAN23G0113 Fragaria x ananassa HOM05D006393 ORTHO05D008088 2.8e-27 125.6 132 53.0
MBI04_g35350_MAGBIO Magnolia biondii HOM05D006393 ORTHO05D008088 2.8e-27 125.6 95 63.2
AUR62011040 Chenopodium quinoa HOM05D006393 ORTHO05D008088 1.4e-26 123.2 110 56.4
Mapoly0052s0018 Marchantia polymorpha HOM05D006393 ORTHO05D008088 1.5e-25 119.8 130 45.4
SMO340G0297 Selaginella moellendorffii HOM05D006393 ORTHO05D008088 2.0e-25 119.4 130 48.5
Dinv41564 Davidia involucrata HOM05D006752 ORTHO05D008088 3.4e-25 118.6 76 69.7
Lj7A639G46 Lonicera japonica HOM05D006393 ORTHO05D008088 5.8e-25 117.9 164 42.1
Pp3c12_24880 Physcomitrium patens HOM05D006393 ORTHO05D008088 7.5e-25 117.5 128 43.8
Sc07g0007380 Simmondsia chinensis HOM05D006393 ORTHO05D008088 5.4e-23 111.3 76 67.1
Os01g0178200 Oryza sativa ssp. japonica HOM05D006393 ORTHO05D008088 9.2e-23 110.5 168 39.3
Lsat_1_v5_gn_7_42880 Lactuca sativa HOM05D006393 ORTHO05D008088 2.7e-22 109.0 130 47.7
Nitab4.5_0010615g0010 Nicotiana tabacum HOM05D006393 ORTHO05D008088 1.6e-19 99.8 95 51.6
Cc06_g09230 Coffea canephora HOM05D006393 ORTHO05D008088 2.8e-19 99.0 76 60.5
Peaxi162Scf00223g01425 Petunia axillaris HOM05D006393 ORTHO05D008088 6.2e-19 97.8 120 48.3
SEGI_23420 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 1.4e-18 96.7 80 52.5
SalBow7G4467 Salvia bowleyana HOM05D006393 ORTHO05D008088 1.5e-17 93.2 120 42.5
ECA240G0151 Erigeron canadensis HOM05D006393 ORTHO05D008088 2.0e-17 92.8 68 61.8
SEGI_36873 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 1.7e-16 89.7 87 49.4
Peaxi162Scf00223g01424 Petunia axillaris HOM05D006393 ORTHO05D008088 1.9e-15 86.3 132 41.7
SEGI_10855 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 7.3e-12 74.3 120 40.0
Cre02.g118200 Chlamydomonas reinhardtii HOM05D006393 ORTHO05D008088 1.6e-11 73.2 128 39.1
CARHR192920 Cardamine hirsuta HOM05D006393 ORTHO05D008088 4.7e-11 71.6 47 61.7
PRCOL_00002470 Prasinoderma coloniale HOM05D006393 ORTHO05D008088 6.4e-08 61.2 124 32.3
Cre17.g726350 Chlamydomonas reinhardtii HOM05D006393 ORTHO05D008088 8.3e-08 60.8 166 31.3
SEGI_30446 Sequoiadendron giganteum HOM05D006393 ORTHO05D000979 5.4e-07 58.2 59 49.2
SEGI_14370 Sequoiadendron giganteum HOM05D006393 ORTHO05D008088 6.0e-06 54.7 72 41.7
TAR636G3545 Trochodendron aralioides HOM05D006393 ORTHO05D008088 7.8e-06 54.3 44 56.8


User provided reference genes

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