Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L02995 Eucalyptus grandis HOM05D005174 ORTHO05D006784 2.2e-157 558.9 286 100.0
Eucgr.H00450 Eucalyptus grandis HOM05D005174 ORTHO05D006784 2.0e-150 535.8 322 88.2
PGR044G1014 Punica granatum HOM05D005174 ORTHO05D006784 1.7e-112 409.8 320 66.6
Lj5g0013947 Lotus japonicus HOM05D005174 ORTHO05D006784 7.3e-108 394.4 321 66.7
arahy.Tifrunner.gnm1.ann1.3YB7R6 Arachis hypogaea HOM05D005174 ORTHO05D006784 1.2e-107 393.7 319 68.0
Psat5g120840 Pisum sativum HOM05D005174 ORTHO05D006784 2.1e-107 392.9 327 66.4
Ca_13578_v3 Cicer arietinum L. HOM05D005174 ORTHO05D006784 2.8e-107 392.5 325 66.2
Lj1g0014313 Lotus japonicus HOM05D005174 ORTHO05D006784 6.2e-107 391.3 320 66.6
Duzib093G0119 Durio zibethinus HOM05D005174 ORTHO05D006784 1.4e-106 390.2 320 64.1
COL.COLO4_12205 Corchorus olitorius HOM05D005174 ORTHO05D006784 3.1e-106 389.0 320 64.1
Manes.02G161600 Manihot esculenta HOM05D005174 ORTHO05D006784 5.2e-106 388.3 319 63.6
CSS0047682 Camellia sinensis var. sinensis HOM05D005174 ORTHO05D006784 6.8e-106 387.9 316 65.2
Lalb_Chr08g0241531 Lupinus albus HOM05D005174 ORTHO05D006784 8.9e-106 387.5 320 65.0
PGSC0003DMG400017574 Solanum tuberosum HOM05D005174 ORTHO05D006784 1.2e-105 387.1 318 63.8
Gorai.005G090400 Gossypium raimondii HOM05D005174 ORTHO05D006784 3.4e-105 385.6 320 63.8
GSVIVG01008896001 Vitis vinifera HOM05D005174 ORTHO05D006784 4.4e-105 385.2 319 64.9
Thecc.08G122000 Theobroma cacao HOM05D005174 ORTHO05D006784 9.8e-105 384.0 318 64.5
CSS0048949 Camellia sinensis var. sinensis HOM05D005174 ORTHO05D006784 1.3e-104 383.6 317 63.4
Duzib116G0013 Durio zibethinus HOM05D005174 ORTHO05D006784 2.9e-104 382.5 336 61.6
Glyma.14G147200 Glycine max HOM05D005174 ORTHO05D006784 3.7e-104 382.1 320 62.5
TPR.G22992 Trifolium pratense HOM05D005174 ORTHO05D006784 3.7e-104 382.1 328 63.4
Glyma.06G111200 Glycine max HOM05D005174 ORTHO05D006784 4.9e-104 381.7 319 63.9
ClCG11G015640 Citrullus lanatus HOM05D005174 ORTHO05D006784 1.9e-103 379.8 315 62.9
Dinv40398 Davidia involucrata HOM05D005174 ORTHO05D006784 2.4e-103 379.4 318 64.5
Gorai.009G244400 Gossypium raimondii HOM05D005174 ORTHO05D006784 2.4e-103 379.4 320 63.4
CsaV3_4G028370 Cucumis sativus L. HOM05D005174 ORTHO05D006784 5.4e-103 378.3 317 62.5
Prupe.1G501000 Prunus persica HOM05D005174 ORTHO05D006784 7.1e-103 377.9 320 63.4
VMungo1309G0682 Vigna mungo HOM05D005174 ORTHO05D006784 9.2e-103 377.5 319 62.7
Gohir.D05G236100 Gossypium hirsutum HOM05D005174 ORTHO05D006784 1.2e-102 377.1 320 63.1
Phvul.009G123200 Phaseolus vulgaris HOM05D005174 ORTHO05D006784 1.2e-102 377.1 319 62.4
TAR381G1686 Trochodendron aralioides HOM05D005174 ORTHO05D006784 1.2e-102 377.1 322 64.3
Cc01_g07610 Coffea canephora HOM05D005174 ORTHO05D006784 2.7e-102 375.9 318 61.3
Gohir.A05G233700 Gossypium hirsutum HOM05D005174 ORTHO05D006784 2.7e-102 375.9 320 63.1
Lalb_Chr17g0343851 Lupinus albus HOM05D005174 ORTHO05D006784 2.7e-102 375.9 322 63.4
CANSAT25G0921 Cannabis sativa HOM05D005174 ORTHO05D006784 7.8e-102 374.4 321 62.6
Cpa.g.sc36.39 Carica papaya HOM05D005174 ORTHO05D006784 2.3e-101 372.9 305 66.6
Sc01g0001320 Simmondsia chinensis HOM05D005174 ORTHO05D006784 3.9e-101 372.1 314 63.1
Sopen06g020560 Solanum pennellii HOM05D005174 ORTHO05D006784 5.1e-101 371.7 318 62.3
THA.LOC104806814 Tarenaya hassleriana HOM05D005174 ORTHO05D006784 5.1e-101 371.7 315 62.2
Solyc06g060420.3 Solanum lycopersicum HOM05D005174 ORTHO05D006784 6.6e-101 371.3 318 62.6
Hund24749 Selenicereus undatus HOM05D005174 ORTHO05D006784 1.1e-100 370.5 328 61.0
Cfa015995 Carpinus fangiana HOM05D005174 ORTHO05D006784 1.5e-100 370.2 325 62.5
Gohir.D02G080900 Gossypium hirsutum HOM05D005174 ORTHO05D006784 2.5e-100 369.4 320 62.2
Medtr3g072620 Medicago truncatula HOM05D005174 ORTHO05D006784 3.3e-100 369.0 319 64.6
Potri.005G175900 Populus trichocarpa HOM05D005174 ORTHO05D006784 5.6e-100 368.2 320 60.6
CiPaw.05G223800 Carya illinoinensis HOM05D005174 ORTHO05D006784 7.3e-100 367.9 318 63.2
QL09p035644 Quercus lobata HOM05D005174 ORTHO05D006784 9.5e-100 367.5 311 65.0
Sed0012589 Sechium edule HOM05D005174 ORTHO05D006784 9.5e-100 367.5 315 61.0
arahy.Tifrunner.gnm1.ann1.Z8FB5F Arachis hypogaea HOM05D005174 ORTHO05D006784 2.1e-99 366.3 374 58.0
TWI56G0960 Tripterygium wilfordii HOM05D005174 ORTHO05D006784 3.6e-99 365.5 313 62.6
Migut.C01145 Erythranthe guttata HOM05D005174 ORTHO05D006784 4.0e-98 362.1 303 64.4
RcHm_v2.0_Chr6g0295461 Rosa chinensis HOM05D005174 ORTHO05D006784 1.2e-97 360.5 313 62.3
MSTRG.1457 Avicennia marina HOM05D005174 ORTHO05D006784 3.4e-97 359.0 316 61.4
Nn5g28198 Nelumbo nucifera HOM05D005174 ORTHO05D006784 3.4e-97 359.0 314 60.5
AUR62042433 Chenopodium quinoa HOM05D005174 ORTHO05D006784 1.3e-96 357.1 317 60.9
FvH4_2g26610 Fragaria vesca HOM05D005174 ORTHO05D006784 1.3e-96 357.1 313 62.6
FAN24G0526 Fragaria x ananassa HOM05D005174 ORTHO05D006784 1.3e-96 357.1 313 62.6
Peaxi162Scf00051g00623 Petunia axillaris HOM05D005174 ORTHO05D006784 2.2e-96 356.3 284 66.5
MD15G1352500 Malus domestica HOM05D005174 ORTHO05D006784 8.4e-96 354.4 319 61.8
Nitab4.5_0008211g0030 Nicotiana tabacum HOM05D005174 ORTHO05D006784 8.4e-96 354.4 335 59.1
AL1G52500 Arabidopsis lyrata HOM05D005174 ORTHO05D006784 2.4e-95 352.8 307 63.2
SalBow7G2597 Salvia bowleyana HOM05D005174 ORTHO05D006784 4.1e-95 352.1 359 55.2
AT1G44835 Arabidopsis thaliana HOM05D005174 ORTHO05D006784 5.4e-95 351.7 306 62.1
Carub.0001s3538 Capsella rubella HOM05D005174 ORTHO05D006784 5.4e-95 351.7 308 63.6
Ciclev10001813m.g Citrus clementina HOM05D005174 ORTHO05D006784 7.1e-95 351.3 318 61.6
Aqoxy6G00176 Aquilegia oxysepala HOM05D005174 ORTHO05D006784 2.7e-94 349.4 314 58.6
SGA_v2.0_scaffold52G18977 Striga asiatica HOM05D005174 ORTHO05D006784 2.7e-94 349.4 303 63.0
ECA232G2439 Erigeron canadensis HOM05D005174 ORTHO05D006784 6.0e-94 348.2 322 60.2
Oeu047941.1 Olea europaea HOM05D005174 ORTHO05D006784 7.8e-94 347.8 326 58.6
BcaB04g17581 Brassica carinata HOM05D005174 ORTHO05D006784 1.0e-93 347.4 308 61.0
AUR62018164 Chenopodium quinoa HOM05D005174 ORTHO05D006784 1.3e-93 347.1 334 58.1
Psat2g085920 Pisum sativum HOM05D005174 ORTHO05D006784 1.3e-93 347.1 369 53.9
FAN20G1758 Fragaria x ananassa HOM05D005174 ORTHO05D006784 1.7e-93 346.7 311 62.4
BcaC07g37283 Brassica carinata HOM05D005174 ORTHO05D006784 3.0e-93 345.9 309 61.2
C08p07120 Brassica napus HOM05D005174 ORTHO05D006784 3.0e-93 345.9 309 61.2
BolC8t47557H Brassica oleracea HOM05D005174 ORTHO05D006784 3.0e-93 345.9 309 61.2
BraA08t32633Z Brassica rapa HOM05D005174 ORTHO05D006784 3.0e-93 345.9 309 61.5
A08p06300 Brassica napus HOM05D005174 ORTHO05D006784 3.9e-93 345.5 309 61.2
HanXRQChr02g0041151 Helianthus annuus HOM05D005174 ORTHO05D006784 6.6e-93 344.7 324 61.1
CARHR036100 Cardamine hirsuta HOM05D005174 ORTHO05D006784 1.1e-92 344.0 307 61.9
Thhalv10021201m.g Eutrema salsugineum HOM05D005174 ORTHO05D006784 5.6e-92 341.7 305 61.3
Thhalv10004660m.g Eutrema salsugineum HOM05D005174 ORTHO05D006784 7.3e-92 341.3 305 61.3
BcaC08g42881 Brassica carinata HOM05D005174 ORTHO05D006784 1.2e-91 340.5 310 58.7
Sp1g33700 Schrenkiella parvula HOM05D005174 ORTHO05D006784 3.6e-91 339.0 307 61.2
PSO782G4297 Papaver somniferum HOM05D005174 ORTHO05D006784 2.4e-90 336.3 322 58.7
BolC6t35233H Brassica oleracea HOM05D005174 ORTHO05D006784 3.1e-90 335.9 314 59.6
C06p00970 Brassica napus HOM05D005174 ORTHO05D006784 4.0e-90 335.5 312 58.3
Lsat_1_v5_gn_4_135460 Lactuca sativa HOM05D005174 ORTHO05D006784 1.5e-89 333.6 329 58.7
Aa31LG6G9210 Aethionema arabicum HOM05D005174 ORTHO05D006784 4.4e-89 332.0 307 59.0
A10p07300 Brassica napus HOM05D005174 ORTHO05D006784 5.8e-89 331.6 309 59.5
BraSC36t46091Z Brassica rapa HOM05D005174 ORTHO05D006784 5.8e-89 331.6 309 59.5
vmacro00818 Vaccinium macrocarpon HOM05D005174 ORTHO05D006784 9.9e-89 330.9 299 60.9
PSO170G4538 Papaver somniferum HOM05D005174 ORTHO05D006784 6.4e-88 328.2 322 57.5
Atru.chr13.1416 Acer truncatum HOM05D005174 ORTHO05D006784 3.2e-87 325.9 299 59.2
ATR0193G024 Amborella trichopoda HOM05D005174 ORTHO05D006784 5.4e-87 325.1 315 57.1
RhsimUnG0094500 Rhododendron simsii HOM05D005174 ORTHO05D006784 7.1e-87 324.7 327 56.9
Sabra05G0132500 Salix brachista HOM05D005174 ORTHO05D006784 3.5e-86 322.4 377 49.6
Actinidia29457 Actinidia chinensis HOM05D005174 ORTHO05D006784 1.0e-85 320.9 318 58.2
Sc01g0001280 Simmondsia chinensis HOM05D005174 ORTHO05D006784 2.3e-85 319.7 236 70.3
EL10Ac2g03105 Beta vulgaris HOM05D005174 ORTHO05D006784 3.9e-85 318.9 306 57.5
CAN.G1396.5 Capsicum annuum HOM05D005174 ORTHO05D006784 2.4e-82 309.7 236 69.1
CDE05G2191 Ceratophyllum demersum HOM05D005174 ORTHO05D006784 5.3e-82 308.5 312 53.8
Zm00001eb193560 Zea mays HOM05D005174 ORTHO05D006784 9.9e-81 304.3 309 56.0
Os02g0767700 Oryza sativa ssp. japonica HOM05D005174 ORTHO05D006784 4.2e-79 298.9 305 55.7
MELO3C032634.2 Cucumis melo HOM05D005174 ORTHO05D006784 1.9e-76 290.0 300 56.0
Nitab4.5_0000633g0140 Nicotiana tabacum HOM05D005174 ORTHO05D006784 2.5e-76 289.7 320 52.2
DCAR_017401 Daucus carota HOM05D005174 ORTHO05D006784 2.8e-75 286.2 177 80.8
FAN15G0922 Fragaria x ananassa HOM05D005174 ORTHO05D006784 4.8e-75 285.4 348 50.9
MBI03_g33021_MAGBIO Magnolia biondii HOM05D005174 ORTHO05D006784 1.2e-70 270.8 264 58.3
FAN27G1282 Fragaria x ananassa HOM05D005174 ORTHO05D006784 2.7e-70 269.6 314 52.2
Gohir.A02G073700 Gossypium hirsutum HOM05D005174 ORTHO05D006784 1.6e-67 260.4 284 53.9
unitig_82.g26987 Utricularia gibba HOM05D005174 ORTHO05D006784 4.8e-67 258.8 293 52.2
Ah.10g032020 Amaranthus hybridus HOM05D005174 ORTHO05D006784 5.8e-65 251.9 319 49.5
Pp3c18_22250 Physcomitrium patens HOM05D005174 ORTHO05D006784 6.5e-64 248.4 303 47.2
Mapoly0010s0001 Marchantia polymorpha HOM05D005174 ORTHO05D006784 4.3e-60 235.7 309 45.3
SEGI_02373 Sequoiadendron giganteum HOM05D005174 ORTHO05D006784 1.5e-57 227.3 270 48.5
Cre10.g425950 Chlamydomonas reinhardtii HOM05D005174 ORTHO05D006784 6.9e-50 201.8 205 51.2
Haze_00470 Corylus avellana HOM05D005174 ORTHO05D006784 4.6e-46 189.1 110 89.1
HPP92_001042 Vanilla planifolia HOM05D005174 ORTHO05D006784 1.4e-45 187.6 320 39.4
MD08G1166300 Malus domestica HOM05D005174 ORTHO05D006784 9.4e-39 164.9 110 76.4
FAN20G0512 Fragaria x ananassa HOM05D005174 ORTHO05D006784 2.1e-38 163.7 263 41.4
PRCOL_00005180 Prasinoderma coloniale HOM05D005174 ORTHO05D006784 1.8e-37 160.6 175 46.9
Hund16845 Selenicereus undatus HOM05D005174 ORTHO05D006784 1.5e-36 157.5 105 76.2
Lj7A337T25 Lonicera japonica HOM05D005174 ORTHO05D006784 3.7e-35 152.9 176 50.0
Sabra15G0076900 Salix brachista HOM05D000453 ORTHO05D000387 3.7e-35 152.9 136 62.5
SMO200G0142 Selaginella moellendorffii HOM05D000188 ORTHO05D007139 7.5e-28 128.6 228 38.6
Haze_00471 Corylus avellana HOM05D005174 ORTHO05D006784 3.5e-25 119.8 196 42.9
Ca_03754_v3 Cicer arietinum L. HOM05D005174 ORTHO05D006784 1.9e-23 114.0 99 59.6
Sabra02G0067100 Salix brachista HOM05D005174 ORTHO05D006784 5.7e-20 102.4 355 30.1
Duzib041G0272 Durio zibethinus HOM05D005174 ORTHO05D015215 5.5e-15 85.9 70 65.7
arahy.Tifrunner.gnm1.ann1.032V6W Arachis hypogaea HOM05D005174 ORTHO05D015215 9.5e-15 85.1 46 93.5
arahy.Tifrunner.gnm1.ann1.PAU1NR Arachis hypogaea HOM05D005174 ORTHO05D015215 9.5e-15 85.1 46 93.5
arahy.Tifrunner.gnm1.ann1.RE5YQ2 Arachis hypogaea HOM05D005174 ORTHO05D015215 9.5e-15 85.1 46 93.5
Cfa010764 Carpinus fangiana HOM05D005174 ORTHO05D006784 3.6e-14 83.2 77 58.4
arahy.Tifrunner.gnm1.ann1.S56SQA Arachis hypogaea HOM05D005174 ORTHO05D015215 8.0e-14 82.0 67 64.2
arahy.Tifrunner.gnm1.ann1.W2W6PZ Arachis hypogaea HOM05D005174 ORTHO05D015215 1.4e-13 81.3 45 91.1
Glyma.04G251502 Glycine max HOM05D005174 ORTHO05D006784 1.2e-12 78.2 85 43.5
Potri.002G085700 Populus trichocarpa HOM05D005174 ORTHO05D050453 3.4e-12 76.6 54 68.5
Ca_03755_v3 Cicer arietinum L. HOM05D005174 ORTHO05D006784 2.8e-11 73.6 99 42.4
Oeu059427.1 Olea europaea HOM05D005174 ORTHO05D006784 3.7e-11 73.2 50 64.0
SEGI_30371 Sequoiadendron giganteum HOM05D005174 ORTHO05D050453 3.1e-10 70.1 53 64.2
arahy.Tifrunner.gnm1.ann1.9F26EH Arachis hypogaea HOM05D005174 ORTHO05D015215 2.3e-08 63.9 51 70.6
FAN24G2292 Fragaria x ananassa HOM05D005174 ORTHO05D006784 5.6e-07 59.3 56 50.0
CiPaw.05G223900 Carya illinoinensis HOM05D005174 ORTHO05D006784 1.6e-06 57.8 69 47.8
MBI04_g30787_MAGBIO Magnolia biondii HOM05D005174 ORTHO05D006784 8.0e-06 55.5 80 45.0
SGA_v2.0_scaffold24G10473 Striga asiatica HOM05D021410 ORTHO05D401290 8.0e-06 55.5 36 72.2


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