Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L02884 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.5e-33 146.4 126 100.0
Eucgr.E02066 Eucalyptus grandis HOM05D002879 ORTHO05D002930 4.9e-32 141.4 126 95.2
Eucgr.E02071 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.1e-31 140.2 126 91.3
Eucgr.E02063 Eucalyptus grandis HOM05D002879 ORTHO05D002930 8.6e-29 130.6 102 90.2
Eucgr.E02064 Eucalyptus grandis HOM05D002879 ORTHO05D002930 3.3e-28 128.6 126 86.5
Eucgr.E02065 Eucalyptus grandis HOM05D002879 ORTHO05D002930 2.6e-25 119.0 126 85.7
Eucgr.E02069 Eucalyptus grandis HOM05D002879 ORTHO05D002930 7.6e-25 117.5 126 84.9
Eucgr.E02070 Eucalyptus grandis HOM05D002879 ORTHO05D002930 5.4e-23 111.3 96 88.5
Eucgr.E02068 Eucalyptus grandis HOM05D002879 ORTHO05D002930 9.6e-20 100.5 102 70.6
Duzib116G0596 Durio zibethinus HOM05D002879 ORTHO05D002930 5.8e-17 91.3 84 77.4
TAR625G0538 Trochodendron aralioides HOM05D002879 ORTHO05D002930 6.4e-16 87.8 88 50.0
TPR.G31183 Trifolium pratense HOM05D002879 ORTHO05D002930 1.9e-15 86.3 81 76.5
TAR625G0963 Trochodendron aralioides HOM05D002879 ORTHO05D002930 1.9e-15 86.3 88 54.5
Actinidia29538 Actinidia chinensis HOM05D002879 ORTHO05D002930 3.5e-14 82.0 67 62.7
Potri.005G193800 Populus trichocarpa HOM05D002879 ORTHO05D002930 3.5e-14 82.0 67 61.2
Potri.005G193901 Populus trichocarpa HOM05D002879 ORTHO05D002930 6.0e-14 81.3 70 58.6
Haze_17769 Corylus avellana HOM05D002879 ORTHO05D002930 1.7e-13 79.7 69 60.9
Solyc04g071580.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 1.5e-12 76.6 74 55.4
Eucgr.E02067 Eucalyptus grandis HOM05D002879 ORTHO05D002930 2.5e-12 75.9 38 97.4
Dinv41066 Davidia involucrata HOM05D002879 ORTHO05D002930 7.4e-12 74.3 92 64.1
Aqoxy5G02058 Aquilegia oxysepala HOM05D002879 ORTHO05D002930 9.6e-12 73.9 73 54.8
THA.LOC104809205 Tarenaya hassleriana HOM05D002879 ORTHO05D002930 2.1e-11 72.8 83 54.2
Migut.N02014 Erythranthe guttata HOM05D002879 ORTHO05D002930 6.2e-11 71.2 75 50.7
vmacro23422 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 3.1e-10 68.9 67 53.7
Haze_17772 Corylus avellana HOM05D002879 ORTHO05D002930 4.0e-10 68.6 60 60.0
Migut.C00982 Erythranthe guttata HOM05D002879 ORTHO05D002930 5.3e-10 68.2 60 56.7
MBI07_g22283_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 5.3e-10 68.2 74 70.3
Lalb_Chr03g0035371 Lupinus albus HOM05D002879 ORTHO05D002930 6.9e-10 67.8 81 42.0
Nitab4.5_0001187g0090 Nicotiana tabacum HOM05D002879 ORTHO05D002930 6.9e-10 67.8 83 44.6
Migut.N01982 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.2e-09 67.0 74 48.6
Migut.N02015 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.2e-09 67.0 74 48.6
Ciclev10002747m.g Citrus clementina HOM05D002879 ORTHO05D002930 1.5e-09 66.6 70 65.7
Duzib093G1472 Durio zibethinus HOM05D002879 ORTHO05D002930 1.5e-09 66.6 77 74.0
Haze_17773 Corylus avellana HOM05D002879 ORTHO05D002930 2.6e-09 65.9 84 45.2
Manes.02G180800 Manihot esculenta HOM05D002879 ORTHO05D002930 2.6e-09 65.9 78 42.3
AUR62040599 Chenopodium quinoa HOM05D002879 ORTHO05D002930 4.5e-09 65.1 70 50.0
Thecc.08G154600 Theobroma cacao HOM05D002879 ORTHO05D002930 5.8e-09 64.7 61 57.4
EL10Ac1g01572 Beta vulgaris HOM05D002879 ORTHO05D002930 7.6e-09 64.3 40 72.5
Sc26g0002490 Simmondsia chinensis HOM05D002879 ORTHO05D002930 7.6e-09 64.3 78 46.2
Nitab4.5_0002764g0010 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.3e-08 63.5 83 42.2
arahy.Tifrunner.gnm1.ann1.BF4CMP Arachis hypogaea HOM05D002879 ORTHO05D002930 1.7e-08 63.2 53 86.8
Manes.02G181000 Manihot esculenta HOM05D002879 ORTHO05D002930 2.2e-08 62.8 70 48.6
Rhsim11G0084600 Rhododendron simsii HOM05D002879 ORTHO05D002930 2.2e-08 62.8 66 56.1
Eucgr.F04219 Eucalyptus grandis HOM05D002879 ORTHO05D002930 2.9e-08 62.4 65 73.8
QL02p029929 Quercus lobata HOM05D002879 ORTHO05D002930 3.8e-08 62.0 87 46.0
Rhsim11G0084800 Rhododendron simsii HOM05D002879 ORTHO05D002930 3.8e-08 62.0 66 54.5
PGR042G1359 Punica granatum HOM05D002879 ORTHO05D002930 4.9e-08 61.6 52 53.8
Sc20g0003610 Simmondsia chinensis HOM05D009547 ORTHO05D011610 4.9e-08 61.6 45 62.2
TWI34G1982 Tripterygium wilfordii HOM05D002879 ORTHO05D002930 4.9e-08 61.6 68 72.1
MD10G1029000 Malus domestica HOM05D002879 ORTHO05D002930 6.4e-08 61.2 55 72.7
Nitab4.5_0002764g0050 Nicotiana tabacum HOM05D002879 ORTHO05D002930 6.4e-08 61.2 74 44.6
Peaxi162Scf01294g00118 Petunia axillaris HOM05D002879 ORTHO05D002930 6.4e-08 61.2 52 57.7
arahy.Tifrunner.gnm1.ann1.4DJY3R Arachis hypogaea HOM05D002879 ORTHO05D002930 8.4e-08 60.8 53 56.6
arahy.Tifrunner.gnm1.ann1.MV46JJ Arachis hypogaea HOM05D002879 ORTHO05D002930 8.4e-08 60.8 53 56.6
Eucgr.D00723 Eucalyptus grandis HOM05D002879 ORTHO05D002930 8.4e-08 60.8 69 72.5
Eucgr.E02058 Eucalyptus grandis HOM05D002879 ORTHO05D002930 8.4e-08 60.8 81 56.8
AUR62040594 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.1e-07 60.5 45 60.0
Glyma.10G224300 Glycine max HOM05D002879 ORTHO05D002930 1.1e-07 60.5 49 59.2
Psat1g101880 Pisum sativum HOM05D002879 ORTHO05D002930 1.1e-07 60.5 52 76.9
Ciclev10002644m.g Citrus clementina HOM05D002879 ORTHO05D002930 1.4e-07 60.1 55 60.0
MELO3C025026.2 Cucumis melo HOM05D002879 ORTHO05D002930 1.4e-07 60.1 81 59.3
Migut.C00980 Erythranthe guttata HOM05D002879 ORTHO05D002930 1.4e-07 60.1 47 70.2
Dinv25878 Davidia involucrata HOM05D002879 ORTHO05D002930 1.9e-07 59.7 91 63.7
Peaxi162Scf00599g00009 Petunia axillaris HOM05D002879 ORTHO05D002930 2.4e-07 59.3 54 55.6
CAN.G264.3 Capsicum annuum HOM05D002879 ORTHO05D002930 3.2e-07 58.9 53 56.6
Migut.N01983 Erythranthe guttata HOM05D002879 ORTHO05D002930 3.2e-07 58.9 52 55.8
Zm00001eb131480 Zea mays HOM05D036376 ORTHO05D002930 3.2e-07 58.9 53 86.8
arahy.Tifrunner.gnm1.ann1.4FY7U3 Arachis hypogaea HOM05D002879 ORTHO05D002930 4.2e-07 58.5 47 85.1
Ciclev10002749m.g Citrus clementina HOM05D002879 ORTHO05D002930 4.2e-07 58.5 55 74.5
Cpa.g.sc21.214 Carica papaya HOM05D002879 ORTHO05D002930 5.5e-07 58.2 51 82.4
MD05G1028100 Malus domestica HOM05D002879 ORTHO05D002930 7.1e-07 57.8 54 77.8
Peaxi162Scf00599g00115 Petunia axillaris HOM05D002879 ORTHO05D002930 7.1e-07 57.8 53 52.8
CiPaw.16G010900 Carya illinoinensis HOM05D002879 ORTHO05D002930 1.2e-06 57.0 56 78.6
Prupe.8G034100 Prunus persica HOM05D002879 ORTHO05D002930 1.2e-06 57.0 84 59.5
Sc26g0002530 Simmondsia chinensis HOM05D002879 ORTHO05D002930 1.6e-06 56.6 63 46.0
Atru.chr13.2082 Acer truncatum HOM05D002879 ORTHO05D002930 2.7e-06 55.8 48 52.1
Actinidia17783 Actinidia chinensis HOM05D002879 ORTHO05D002930 2.7e-06 55.8 55 47.3
Lj5g0010855 Lotus japonicus HOM05D002879 ORTHO05D002930 2.7e-06 55.8 50 52.0
Sc26g0002520 Simmondsia chinensis HOM05D002879 ORTHO05D002930 2.7e-06 55.8 56 50.0
arahy.Tifrunner.gnm1.ann1.HS8YG8 Arachis hypogaea HOM05D002879 ORTHO05D002930 3.5e-06 55.5 81 40.7
vmacro12405 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 3.5e-06 55.5 54 50.0
Zm00001eb083180 Zea mays HOM05D002879 ORTHO05D002930 3.5e-06 55.5 47 68.1
QL02p029925 Quercus lobata HOM05D002879 ORTHO05D002930 6.0e-06 54.7 54 61.1
TWI34G0839 Tripterygium wilfordii HOM05D002879 ORTHO05D002930 6.0e-06 54.7 52 84.6
Cfa018310 Carpinus fangiana HOM05D002879 ORTHO05D002930 7.9e-06 54.3 58 46.6
Solyc04g071610.4 Solanum lycopersicum HOM05D002879 ORTHO05D002930 7.9e-06 54.3 51 52.9
Sopen04g027590 Solanum pennellii HOM05D002879 ORTHO05D002930 7.9e-06 54.3 51 52.9
TPR.G22164 Trifolium pratense HOM05D002879 ORTHO05D002930 7.9e-06 54.3 50 52.0


User provided reference genes

Program Settings