Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L02859 Eucalyptus grandis HOM05D007141 ORTHO05D008975 1.4e-50 202.6 100 100.0
Eucgr.C03070 Eucalyptus grandis HOM05D007141 ORTHO05D008975 3.1e-37 158.3 139 65.5
Manes.16G083100 Manihot esculenta HOM05D007141 ORTHO05D008975 5.1e-32 141.0 95 74.7
RcHm_v2.0_Chr7g0222241 Rosa chinensis HOM05D007141 ORTHO05D008975 6.6e-32 140.6 89 77.5
Ciclev10010008m.g Citrus clementina HOM05D007141 ORTHO05D008975 8.7e-32 140.2 92 73.9
FvH4_2g31430 Fragaria vesca HOM05D007141 ORTHO05D008975 1.9e-31 139.0 100 71.0
FAN15G0931 Fragaria x ananassa HOM05D007141 ORTHO05D008975 1.9e-31 139.0 100 71.0
FAN24G3331 Fragaria x ananassa HOM05D007141 ORTHO05D008975 1.9e-31 139.0 100 71.0
RcHm_v2.0_Chr6g0311391 Rosa chinensis HOM05D007141 ORTHO05D008975 1.9e-31 139.0 89 76.4
FAN27G0109 Fragaria x ananassa HOM05D007141 ORTHO05D008975 4.3e-31 137.9 100 69.0
AUR62009107 Chenopodium quinoa HOM05D007141 ORTHO05D008975 9.6e-31 136.7 98 71.4
Hund03309 Selenicereus undatus HOM05D007141 ORTHO05D008975 1.3e-30 136.3 98 69.4
CiPaw.15G035700 Carya illinoinensis HOM05D007141 ORTHO05D008975 3.6e-30 134.8 109 65.1
Haze_18140 Corylus avellana HOM05D007141 ORTHO05D008975 1.1e-29 133.3 80 80.0
Potri.006G224400 Populus trichocarpa HOM05D007141 ORTHO05D008975 1.4e-29 132.9 85 76.5
Sabra06G0173500 Salix brachista HOM05D007141 ORTHO05D008975 3.1e-29 131.7 85 76.5
Prupe.1G407800 Prunus persica HOM05D007141 ORTHO05D008975 5.3e-29 131.0 78 79.5
Oeu034195.1 Olea europaea HOM05D007141 ORTHO05D008975 1.5e-28 129.4 88 69.3
Rhsim05G0069200 Rhododendron simsii HOM05D007141 ORTHO05D008975 1.5e-28 129.4 84 72.6
Thecc.09G058700 Theobroma cacao HOM05D007141 ORTHO05D008975 2.0e-28 129.0 72 83.3
EL10Ac2g03813 Beta vulgaris HOM05D007141 ORTHO05D008975 2.6e-28 128.6 98 66.3
GSVIVG01035422001 Vitis vinifera HOM05D007141 ORTHO05D008975 3.4e-28 128.3 86 72.1
Duzib150G0643 Durio zibethinus HOM05D007141 ORTHO05D008975 4.4e-28 127.9 85 71.8
Gohir.D07G020900 Gossypium hirsutum HOM05D007141 ORTHO05D008975 4.4e-28 127.9 79 75.9
Gorai.001G021700 Gossypium raimondii HOM05D007141 ORTHO05D008975 4.4e-28 127.9 79 75.9
HanXRQChr10g0309781 Helianthus annuus HOM05D007141 ORTHO05D008975 4.4e-28 127.9 80 73.8
CSS0014882 Camellia sinensis var. sinensis HOM05D007141 ORTHO05D008975 7.6e-28 127.1 89 70.8
CANSAT25G2947 Cannabis sativa HOM05D007141 ORTHO05D008975 9.9e-28 126.7 81 71.6
Cc08_g11030 Coffea canephora HOM05D007141 ORTHO05D008975 9.9e-28 126.7 88 68.2
Ah.10g034080 Amaranthus hybridus HOM05D007141 ORTHO05D008975 1.3e-27 126.3 92 66.3
ECA234G1667 Erigeron canadensis HOM05D007141 ORTHO05D008975 1.3e-27 126.3 80 72.5
MD08G1066900 Malus domestica HOM05D007141 ORTHO05D008975 1.3e-27 126.3 87 70.1
QL02p000427 Quercus lobata HOM05D007141 ORTHO05D008975 1.3e-27 126.3 80 72.5
Atru.chr7.1922 Acer truncatum HOM05D007141 ORTHO05D008975 1.7e-27 125.9 73 78.1
Gohir.A07G021200 Gossypium hirsutum HOM05D007141 ORTHO05D008975 1.7e-27 125.9 79 74.7
CSS0018983 Camellia sinensis var. sinensis HOM05D007141 ORTHO05D008975 2.2e-27 125.6 89 69.7
ClCG08G009990 Citrullus lanatus HOM05D000426 ORTHO05D000328 2.9e-27 125.2 88 70.5
Actinidia25707 Actinidia chinensis HOM05D007141 ORTHO05D008975 3.8e-27 124.8 93 65.6
MELO3C011470.2 Cucumis melo HOM05D007141 ORTHO05D008975 3.8e-27 124.8 80 75.0
DCAR_003142 Daucus carota HOM05D007141 ORTHO05D008975 3.8e-27 124.8 97 61.9
Lsat_1_v5_gn_5_78660 Lactuca sativa HOM05D007141 ORTHO05D008975 3.8e-27 124.8 80 71.2
Nitab4.5_0002797g0020 Nicotiana tabacum HOM05D007141 ORTHO05D008975 3.8e-27 124.8 95 62.1
SalBow4G0322 Salvia bowleyana HOM05D007141 ORTHO05D008975 4.9e-27 124.4 91 65.9
vmacro17441 Vaccinium macrocarpon HOM05D007141 ORTHO05D008975 6.4e-27 124.0 81 70.4
vmacro22570 Vaccinium macrocarpon HOM05D007141 ORTHO05D008975 6.4e-27 124.0 81 70.4
CsaV3_6G032120 Cucumis sativus L. HOM05D007141 ORTHO05D008975 1.1e-26 123.2 80 73.8
Glyma.06G053600 Glycine max HOM05D007141 ORTHO05D008975 1.4e-26 122.9 77 72.7
arahy.Tifrunner.gnm1.ann1.L1P6F7 Arachis hypogaea HOM05D007141 ORTHO05D008975 2.4e-26 122.1 75 74.7
Solyc08g062620.3 Solanum lycopersicum HOM05D007141 ORTHO05D008975 2.4e-26 122.1 78 70.5
Sopen08g018140 Solanum pennellii HOM05D007141 ORTHO05D008975 2.4e-26 122.1 78 70.5
PGSC0003DMG400008211 Solanum tuberosum HOM05D007141 ORTHO05D008975 2.4e-26 122.1 78 70.5
TWI34G1430 Tripterygium wilfordii HOM05D007141 ORTHO05D008975 2.4e-26 122.1 82 74.4
Dinv12459 Davidia involucrata HOM05D007141 ORTHO05D008975 3.2e-26 121.7 80 72.5
MD08G1067500 Malus domestica HOM05D007141 ORTHO05D008975 5.4e-26 120.9 87 66.7
MD09G1070200 Malus domestica HOM05D007141 ORTHO05D008975 5.4e-26 120.9 87 66.7
Sed0026589 Sechium edule HOM05D007141 ORTHO05D008975 5.4e-26 120.9 80 71.2
Thhalv10026676m.g Eutrema salsugineum HOM05D007141 ORTHO05D008975 9.3e-26 120.2 88 68.2
Phvul.009G079400 Phaseolus vulgaris HOM05D007141 ORTHO05D008975 9.3e-26 120.2 77 72.7
CARHR241130 Cardamine hirsuta HOM05D007141 ORTHO05D008975 1.2e-25 119.8 88 67.0
A08p17770 Brassica napus HOM05D007141 ORTHO05D008975 1.6e-25 119.4 88 67.0
CAN.G1181.10 Capsicum annuum HOM05D007141 ORTHO05D008975 1.6e-25 119.4 81 67.9
BraA08t33728Z Brassica rapa HOM05D007141 ORTHO05D008975 2.1e-25 119.0 88 67.0
AL7G18460 Arabidopsis lyrata HOM05D007141 ORTHO05D008975 3.5e-25 118.2 88 67.0
C03p86820 Brassica napus HOM05D007141 ORTHO05D008975 4.6e-25 117.9 88 67.0
Carub.0007s0735 Capsella rubella HOM05D007141 ORTHO05D008975 4.6e-25 117.9 88 67.0
Migut.A00104 Erythranthe guttata HOM05D007141 ORTHO05D008975 4.6e-25 117.9 80 66.2
BolC3t20976H Brassica oleracea HOM05D007141 ORTHO05D008975 7.8e-25 117.1 88 65.9
AT4G33100 Arabidopsis thaliana HOM05D007141 ORTHO05D008975 1.3e-24 116.3 101 61.4
VMungo1309G2876 Vigna mungo HOM05D007141 ORTHO05D008975 1.3e-24 116.3 75 69.3
PSO832G0110 Papaver somniferum HOM05D007141 ORTHO05D008975 3.0e-24 115.2 73 71.2
Lalb_Chr08g0244921 Lupinus albus HOM05D007141 ORTHO05D008975 6.6e-24 114.0 75 69.3
Sp7g30850 Schrenkiella parvula HOM05D007141 ORTHO05D008975 6.6e-24 114.0 88 63.6
BcaC09g52111 Brassica carinata HOM05D007141 ORTHO05D008975 2.5e-23 112.1 87 64.4
CDE07G1700 Ceratophyllum demersum HOM05D007141 ORTHO05D008975 2.5e-23 112.1 62 77.4
BcaC09g52107 Brassica carinata HOM05D007141 ORTHO05D008975 4.3e-23 111.3 78 69.2
A01p05100 Brassica napus HOM05D007141 ORTHO05D008975 4.3e-23 111.3 78 70.5
BraA01t00493Z Brassica rapa HOM05D007141 ORTHO05D008975 4.3e-23 111.3 78 70.5
Psat5g035560 Pisum sativum HOM05D007141 ORTHO05D008975 4.3e-23 111.3 75 70.7
C01p05580 Brassica napus HOM05D007141 ORTHO05D008975 9.6e-23 110.2 78 67.9
Lj1g0005823 Lotus japonicus HOM05D007141 ORTHO05D008975 9.6e-23 110.2 73 71.2
unitig_88.g27673 Utricularia gibba HOM05D007141 ORTHO05D008975 9.6e-23 110.2 79 63.3
Medtr3g104730 Medicago truncatula HOM05D007141 ORTHO05D008975 3.6e-22 108.2 75 68.0
BolC1t00538H Brassica oleracea HOM05D007141 ORTHO05D008975 4.8e-22 107.8 78 66.7
TPR.G3578 Trifolium pratense HOM05D007141 ORTHO05D008975 1.1e-21 106.7 66 74.2
CDE06G2239 Ceratophyllum demersum HOM05D007141 ORTHO05D008975 1.8e-21 105.9 76 63.2
Aa31LG1G7350 Aethionema arabicum HOM05D007141 ORTHO05D008975 2.4e-21 105.5 87 62.1
unitig_0.g2555 Utricularia gibba HOM05D007141 ORTHO05D008975 6.9e-21 104.0 78 60.3
Sc09g0009950 Simmondsia chinensis HOM05D007141 ORTHO05D008975 3.4e-20 101.7 63 76.2
Hma1.2p1_0644F.1_g194800 Hydrangea macrophylla HOM05D007141 ORTHO05D008975 2.2e-19 99.0 63 73.0
Hma1.2p1_1832F.1_g304585 Hydrangea macrophylla HOM05D007141 ORTHO05D008975 2.2e-19 99.0 63 73.0
Os09g0361700 Oryza sativa ssp. japonica HOM05D007141 ORTHO05D008975 3.8e-19 98.2 79 58.2
THA.LOC104819900 Tarenaya hassleriana HOM05D007141 ORTHO05D008975 3.8e-19 98.2 106 53.8
SEGI_38617 Sequoiadendron giganteum HOM05D007141 ORTHO05D008975 4.9e-19 97.8 67 64.2
Zm00001eb310860 Zea mays HOM05D007141 ORTHO05D008975 6.4e-19 97.4 73 57.5
MBI11_g07534_MAGBIO Magnolia biondii HOM05D007141 ORTHO05D008975 4.2e-18 94.7 96 50.0
ATR0051G046 Amborella trichopoda HOM05D007141 ORTHO05D008975 3.5e-17 91.7 62 66.1
Atru.BG.111.p Acer truncatum HOM05D007141 ORTHO05D008975 4.6e-17 91.3 59 72.9
Cfa017995 Carpinus fangiana HOM05D007141 ORTHO05D008975 1.8e-16 89.4 59 72.9
AUR62020564 Chenopodium quinoa HOM05D007141 ORTHO05D008975 3.0e-16 88.6 63 69.8
HPP92_022917 Vanilla planifolia HOM05D007141 ORTHO05D008975 3.9e-16 88.2 71 59.2
HPP92_022928 Vanilla planifolia HOM05D007141 ORTHO05D008975 3.9e-16 88.2 71 59.2
Mapoly0108s0048 Marchantia polymorpha HOM05D007141 ORTHO05D008975 6.7e-16 87.4 68 54.4
AUR62020560 Chenopodium quinoa HOM05D007141 ORTHO05D008975 5.6e-15 84.3 62 69.4
SEGI_00789 Sequoiadendron giganteum HOM05D007141 ORTHO05D008975 1.3e-14 83.2 68 58.8
CAN.G11.20 Capsicum annuum HOM05D007141 ORTHO05D008975 3.7e-14 81.6 48 70.8
FvH4_2g16451 Fragaria vesca HOM05D007141 ORTHO05D008975 1.2e-09 66.6 45 68.9
Peaxi162Scf00070g00023 Petunia axillaris HOM05D007141 ORTHO05D008975 1.6e-09 66.2 44 68.2
SMO361G0717 Selaginella moellendorffii HOM05D007141 ORTHO05D008975 3.5e-09 65.1 65 44.6
AagrBONN_evm.TU.Sc2ySwM_117.1198 Anthoceros agrestis HOM05D007141 ORTHO05D008975 3.0e-08 62.0 42 54.8
Atru.BG.143.p Acer truncatum HOM05D007141 ORTHO05D008975 4.3e-07 58.2 28 85.7
Atru.BG.284.p Acer truncatum HOM05D007141 ORTHO05D008975 9.6e-07 57.0 28 85.7


User provided reference genes

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