Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Eucgr.L02831 Eucalyptus grandis HOM05D003797 ORTHO05D004370 2.5e-87 325.5 170 100.0
Eucgr.G02084 Eucalyptus grandis HOM05D003797 ORTHO05D004370 4.0e-69 265.0 138 100.0
MD16G1016500 Malus domestica HOM05D003797 ORTHO05D004370 1.2e-57 226.9 136 82.4
FAN12G2011 Fragaria x ananassa HOM05D003797 ORTHO05D004370 1.6e-57 226.5 137 81.8
FAN22G0305 Fragaria x ananassa HOM05D003797 ORTHO05D004370 1.6e-57 226.5 137 81.8
FAN17G0483 Fragaria x ananassa HOM05D003797 ORTHO05D004370 2.0e-57 226.1 137 81.8
Prupe.1G335300 Prunus persica HOM05D003797 ORTHO05D004370 2.0e-57 226.1 136 80.9
RcHm_v2.0_Chr4g0442571 Rosa chinensis HOM05D003797 ORTHO05D004370 2.0e-57 226.1 137 81.0
FAN07G2428 Fragaria x ananassa HOM05D003797 ORTHO05D004370 1.3e-56 223.4 137 81.0
CANSAT78G1947 Cannabis sativa HOM05D003797 ORTHO05D004370 5.0e-56 221.5 136 80.1
QL03p037918 Quercus lobata HOM05D003797 ORTHO05D004370 6.6e-56 221.1 136 79.4
RcHm_v2.0_Chr4g0442581 Rosa chinensis HOM05D003797 ORTHO05D004370 1.1e-55 220.3 137 79.6
Potri.010G104100 Populus trichocarpa HOM05D003797 ORTHO05D004370 5.6e-55 218.0 138 78.3
Dinv26370 Davidia involucrata HOM05D003797 ORTHO05D004370 9.5e-55 217.2 133 80.5
Eucgr.B02691 Eucalyptus grandis HOM05D003797 ORTHO05D004370 9.5e-55 217.2 138 78.3
CiPaw.06G054800 Carya illinoinensis HOM05D003797 ORTHO05D004370 1.6e-54 216.5 136 79.4
Cfa015046 Carpinus fangiana HOM05D003797 ORTHO05D004370 2.8e-54 215.7 134 79.1
PGR142G2609 Punica granatum HOM05D003797 ORTHO05D004370 2.8e-54 215.7 138 79.0
Nitab4.5_0003619g0020 Nicotiana tabacum HOM05D003797 ORTHO05D004370 3.6e-54 215.3 133 80.5
Peaxi162Scf00337g00715 Petunia axillaris HOM05D003797 ORTHO05D004370 3.6e-54 215.3 133 81.2
Atru.chr11.837 Acer truncatum HOM05D003797 ORTHO05D004370 4.7e-54 214.9 136 77.2
Actinidia36612 Actinidia chinensis HOM05D003797 ORTHO05D004370 4.7e-54 214.9 133 78.9
Manes.17G085600 Manihot esculenta HOM05D003797 ORTHO05D004370 4.7e-54 214.9 138 75.4
GSVIVG01011628001 Vitis vinifera HOM05D003797 ORTHO05D004370 1.4e-53 213.4 138 79.0
Nitab4.5_0002414g0010 Nicotiana tabacum HOM05D003797 ORTHO05D004370 2.3e-53 212.6 133 79.7
HanXRQChr16g0527241 Helianthus annuus HOM05D003797 ORTHO05D004370 3.0e-53 212.2 134 76.9
Sopen04g003210 Solanum pennellii HOM05D003797 ORTHO05D004370 6.8e-53 211.1 133 77.4
PGSC0003DMG400029467 Solanum tuberosum HOM05D003797 ORTHO05D004370 6.8e-53 211.1 133 77.4
CAN.G74.19 Capsicum annuum HOM05D003797 ORTHO05D004370 8.9e-53 210.7 133 78.2
Manes.15G136600 Manihot esculenta HOM05D003797 ORTHO05D004370 8.9e-53 210.7 133 78.2
Ciclev10017583m.g Citrus clementina HOM05D003797 ORTHO05D004370 1.2e-52 210.3 138 74.6
Cc11_g06660 Coffea canephora HOM05D003797 ORTHO05D004370 1.2e-52 210.3 133 78.9
HanXRQChr12g0383081 Helianthus annuus HOM05D003797 ORTHO05D004370 1.5e-52 209.9 134 76.1
AUR62012750 Chenopodium quinoa HOM05D003797 ORTHO05D004370 2.6e-52 209.1 134 76.1
AUR62021908 Chenopodium quinoa HOM05D003797 ORTHO05D004370 2.6e-52 209.1 134 76.1
Hma1.2p1_0234F.1_g098420 Hydrangea macrophylla HOM05D003797 ORTHO05D004370 2.6e-52 209.1 133 78.2
TWI74G1086 Tripterygium wilfordii HOM05D003797 ORTHO05D004370 4.4e-52 208.4 134 77.6
MSTRG.2118 Avicennia marina HOM05D003797 ORTHO05D004370 5.7e-52 208.0 136 73.5
PSO675G2134 Papaver somniferum HOM05D003797 ORTHO05D004370 5.7e-52 208.0 134 76.9
BcaC03g17074 Brassica carinata HOM05D003797 ORTHO05D004370 7.5e-52 207.6 134 76.1
Dinv06119 Davidia involucrata HOM05D003797 ORTHO05D004370 7.5e-52 207.6 133 75.9
PSO732G0427 Papaver somniferum HOM05D003797 ORTHO05D004370 7.5e-52 207.6 134 76.1
PGR102G0637 Punica granatum HOM05D003797 ORTHO05D004370 7.5e-52 207.6 133 76.7
Solyc04g008060.3 Solanum lycopersicum HOM05D003797 ORTHO05D004370 7.5e-52 207.6 133 76.7
Cpa.g.sc2.168 Carica papaya HOM05D003797 ORTHO05D004370 9.8e-52 207.2 133 75.2
Lsat_1_v5_gn_4_23500 Lactuca sativa HOM05D003797 ORTHO05D004370 9.8e-52 207.2 133 75.9
CSS0047498 Camellia sinensis var. sinensis HOM05D003797 ORTHO05D004370 1.3e-51 206.8 133 77.4
ECA234G4680 Erigeron canadensis HOM05D003797 ORTHO05D004370 1.7e-51 206.5 133 75.9
Phvul.002G322900 Phaseolus vulgaris HOM05D003797 ORTHO05D004370 1.7e-51 206.5 135 73.3
Potri.010G104200 Populus trichocarpa HOM05D003797 ORTHO05D004370 1.7e-51 206.5 133 78.2
TPR.G19268 Trifolium pratense HOM05D003797 ORTHO05D004370 1.7e-51 206.5 138 76.1
Dinv03968 Davidia involucrata HOM05D003797 ORTHO05D004370 2.2e-51 206.1 147 70.1
Oeu006298.1 Olea europaea HOM05D003797 ORTHO05D004370 2.2e-51 206.1 133 76.7
Rhsim09G0088200 Rhododendron simsii HOM05D003797 ORTHO05D004370 2.2e-51 206.1 133 75.9
Sed0007838 Sechium edule HOM05D003797 ORTHO05D004370 2.2e-51 206.1 133 75.2
A02p32320 Brassica napus HOM05D003797 ORTHO05D004370 2.9e-51 205.7 134 75.4
C02p49920 Brassica napus HOM05D003797 ORTHO05D004370 2.9e-51 205.7 134 75.4
BolC2t11071H Brassica oleracea HOM05D003797 ORTHO05D004370 2.9e-51 205.7 134 75.4
BraA02t08249Z Brassica rapa HOM05D003797 ORTHO05D004370 2.9e-51 205.7 134 75.4
QL03p037712 Quercus lobata HOM05D003797 ORTHO05D004370 2.9e-51 205.7 133 75.9
CiPaw.06G054700 Carya illinoinensis HOM05D003797 ORTHO05D004370 3.7e-51 205.3 133 76.7
HanXRQChr17g0565981 Helianthus annuus HOM05D003797 ORTHO05D004370 3.7e-51 205.3 133 75.9
Glyma.08G047500 Glycine max HOM05D003797 ORTHO05D004370 4.9e-51 204.9 135 74.1
Nn3g18415 Nelumbo nucifera HOM05D003797 ORTHO05D004370 4.9e-51 204.9 133 75.9
VMungo0251G2898 Vigna mungo HOM05D003797 ORTHO05D004370 4.9e-51 204.9 135 74.1
Medtr8g105790 Medicago truncatula HOM05D003797 ORTHO05D004370 6.4e-51 204.5 135 76.3
Psat7g007520 Pisum sativum HOM05D003797 ORTHO05D004370 8.3e-51 204.1 135 75.6
arahy.Tifrunner.gnm1.ann1.Q36DTI Arachis hypogaea HOM05D000005 ORTHO05D004370 1.1e-50 203.8 138 73.9
SGA_v2.0_scaffold23G10159 Striga asiatica HOM05D003797 ORTHO05D004370 1.1e-50 203.8 134 76.1
Ah.09g234580 Amaranthus hybridus HOM05D003797 ORTHO05D004370 1.4e-50 203.4 134 74.6
arahy.Tifrunner.gnm1.ann1.2L3ISV Arachis hypogaea HOM05D003797 ORTHO05D004370 1.4e-50 203.4 138 73.2
Dinv00922 Davidia involucrata HOM05D003797 ORTHO05D004370 1.4e-50 203.4 147 70.1
Glyma.05G240600 Glycine max HOM05D003797 ORTHO05D004370 1.4e-50 203.4 135 74.1
SalBow2G0350 Salvia bowleyana HOM05D003797 ORTHO05D004370 1.4e-50 203.4 134 73.1
Ca_17254_v3 Cicer arietinum L. HOM05D003797 ORTHO05D004370 1.8e-50 203.0 135 74.8
ClCG07G005420 Citrullus lanatus HOM05D003797 ORTHO05D004370 1.8e-50 203.0 133 75.2
Thhalv10005591m.g Eutrema salsugineum HOM05D003797 ORTHO05D004370 1.8e-50 203.0 134 74.6
Os04g0463400 Oryza sativa ssp. japonica HOM05D003797 ORTHO05D004370 1.8e-50 203.0 137 70.8
Sed0023787 Sechium edule HOM05D003797 ORTHO05D004370 1.8e-50 203.0 138 74.6
Ah.14g087870 Amaranthus hybridus HOM05D003797 ORTHO05D004370 2.4e-50 202.6 134 73.1
AL5G10900 Arabidopsis lyrata HOM05D003797 ORTHO05D004370 3.2e-50 202.2 134 73.1
AT2G01770 Arabidopsis thaliana HOM05D003797 ORTHO05D004370 3.2e-50 202.2 134 73.1
CsaV3_5G014530 Cucumis sativus L. HOM05D003797 ORTHO05D004370 3.2e-50 202.2 133 73.7
Haze_10851 Corylus avellana HOM05D003797 ORTHO05D004370 4.1e-50 201.8 135 73.3
MELO3C005259.2 Cucumis melo HOM05D003797 ORTHO05D004370 4.1e-50 201.8 133 72.9
Gorai.013G029700 Gossypium raimondii HOM05D003797 ORTHO05D004370 4.1e-50 201.8 134 75.4
MBI19_g09381_MAGBIO Magnolia biondii HOM05D003797 ORTHO05D004370 4.1e-50 201.8 133 75.2
Migut.E00497 Erythranthe guttata HOM05D003797 ORTHO05D004370 5.4e-50 201.4 133 74.4
FAN12G0353 Fragaria x ananassa HOM05D003797 ORTHO05D004370 5.4e-50 201.4 134 75.4
Sp2g13230 Schrenkiella parvula HOM05D003797 ORTHO05D004370 5.4e-50 201.4 134 74.6
Gohir.A13G027600 Gossypium hirsutum HOM05D003797 ORTHO05D004370 7.0e-50 201.1 134 75.4
Gohir.D13G026400 Gossypium hirsutum HOM05D003797 ORTHO05D004370 7.0e-50 201.1 134 74.6
LjContig00081g0026703 Lotus japonicus HOM05D003797 ORTHO05D004370 7.0e-50 201.1 135 74.1
Atru.chr11.843 Acer truncatum HOM05D003797 ORTHO05D004370 9.2e-50 200.7 133 75.2
Atru.chr11.849 Acer truncatum HOM05D003797 ORTHO05D004370 9.2e-50 200.7 133 75.2
Eucgr.B02690 Eucalyptus grandis HOM05D003797 ORTHO05D004370 9.2e-50 200.7 133 74.4
FAN07G0297 Fragaria x ananassa HOM05D003797 ORTHO05D004370 9.2e-50 200.7 133 75.2
HanXRQChr09g0251961 Helianthus annuus HOM05D003797 ORTHO05D004370 9.2e-50 200.7 134 74.6
MELO3C026414.2 Cucumis melo HOM05D005650 ORTHO05D007020 1.2e-49 200.3 133 72.9
Lj3A863T39 Lonicera japonica HOM05D003797 ORTHO05D004370 1.2e-49 200.3 150 69.3
CsaV3_5G027930 Cucumis sativus L. HOM05D003797 ORTHO05D004370 1.6e-49 199.9 138 74.6
FvH4_4g33340 Fragaria vesca HOM05D003797 ORTHO05D004370 1.6e-49 199.9 133 75.2
FAN22G2109 Fragaria x ananassa HOM05D003797 ORTHO05D004370 1.6e-49 199.9 133 75.2
Lalb_Chr05g0222091 Lupinus albus HOM05D003797 ORTHO05D004370 1.6e-49 199.9 135 71.9
CANSAT78G0734 Cannabis sativa HOM05D003797 ORTHO05D004370 2.0e-49 199.5 133 75.2
Ciclev10016475m.g Citrus clementina HOM05D003797 ORTHO05D004370 2.0e-49 199.5 133 73.7
MELO3C005260.2 Cucumis melo HOM05D003797 ORTHO05D004370 2.0e-49 199.5 137 73.7
Prupe.1G335200 Prunus persica HOM05D003797 ORTHO05D004370 2.0e-49 199.5 133 73.7
DCAR_023568 Daucus carota HOM05D003797 ORTHO05D004370 2.7e-49 199.1 133 72.9
Duzib251G0134 Durio zibethinus HOM05D003797 ORTHO05D004370 2.7e-49 199.1 134 73.1
BcaB07g30374 Brassica carinata HOM05D003797 ORTHO05D004370 3.5e-49 198.7 146 69.2
RcHm_v2.0_Chr4g0442611 Rosa chinensis HOM05D003797 ORTHO05D004370 3.5e-49 198.7 133 74.4
Medtr8g105810 Medicago truncatula HOM05D003797 ORTHO05D004370 4.6e-49 198.4 135 74.1
PSO675G5697 Papaver somniferum HOM05D003797 ORTHO05D004370 5.9e-49 198.0 134 73.1
Sabra10G0076600 Salix brachista HOM05D003797 ORTHO05D004370 5.9e-49 198.0 147 68.0
CARHR144350 Cardamine hirsuta HOM05D003797 ORTHO05D004370 7.8e-49 197.6 134 71.6
PSO732G0533 Papaver somniferum HOM05D003797 ORTHO05D004370 7.8e-49 197.6 134 73.1
THA.LOC104823632 Tarenaya hassleriana HOM05D003797 ORTHO05D004370 7.8e-49 197.6 136 70.6
COL.COLO4_27615 Corchorus olitorius HOM05D003797 ORTHO05D004370 1.0e-48 197.2 134 73.9
FAN17G2298 Fragaria x ananassa HOM05D003797 ORTHO05D004370 1.0e-48 197.2 133 73.7
SEGI_33821 Sequoiadendron giganteum HOM05D003797 ORTHO05D004370 1.0e-48 197.2 136 69.1
Aqoxy3G04068 Aquilegia oxysepala HOM05D003797 ORTHO05D004370 1.7e-48 196.4 133 72.2
Thecc.02G308100 Theobroma cacao HOM05D003797 ORTHO05D004370 1.7e-48 196.4 134 73.1
TAR629G0971 Trochodendron aralioides HOM05D003797 ORTHO05D004370 2.3e-48 196.1 133 73.7
CsaV3_5G027940 Cucumis sativus L. HOM05D003797 ORTHO05D004370 3.0e-48 195.7 133 70.7
A06p44090 Brassica napus HOM05D003797 ORTHO05D004370 3.9e-48 195.3 134 70.9
MD16G1016600 Malus domestica HOM05D003797 ORTHO05D004370 3.9e-48 195.3 133 70.7
unitig_22.g5605 Utricularia gibba HOM05D003797 ORTHO05D004370 6.6e-48 194.5 138 67.4
Aa31LG2G8120 Aethionema arabicum HOM05D003797 ORTHO05D004370 8.6e-48 194.1 134 71.6
BcaC06g31278 Brassica carinata HOM05D003797 ORTHO05D004370 2.5e-47 192.6 136 70.6
Carub.0005s0073 Capsella rubella HOM05D003797 ORTHO05D004370 2.5e-47 192.6 134 70.1
BraA06t27283Z Brassica rapa HOM05D003797 ORTHO05D004370 3.3e-47 192.2 134 70.1
unitig_27.g25168 Utricularia gibba HOM05D003797 ORTHO05D004370 3.3e-47 192.2 134 70.1
unitig_8.g4013 Utricularia gibba HOM05D003797 ORTHO05D004370 3.3e-47 192.2 134 69.4
Zm00001eb424350 Zea mays HOM05D003797 ORTHO05D004370 3.3e-47 192.2 133 70.7
Nn3g18418 Nelumbo nucifera HOM05D003797 ORTHO05D004370 5.6e-47 191.4 138 68.1
ATR0118G024 Amborella trichopoda HOM05D003797 ORTHO05D004370 9.5e-47 190.7 134 70.9
Duzib248G0263 Durio zibethinus HOM05D003797 ORTHO05D004370 1.2e-46 190.3 134 70.9
PSO384G3089 Papaver somniferum HOM05D003797 ORTHO05D004370 1.2e-46 190.3 134 68.7
Os09g0396900 Oryza sativa ssp. japonica HOM05D003797 ORTHO05D004370 2.1e-46 189.5 133 69.9
Duzib268G1244 Durio zibethinus HOM05D003797 ORTHO05D004370 8.0e-46 187.6 133 70.7
MD13G1018700 Malus domestica HOM05D003797 ORTHO05D004370 1.0e-45 187.2 147 63.9
Duzib251G0065 Durio zibethinus HOM05D003797 ORTHO05D004370 1.8e-45 186.4 136 64.7
PSO339G4314 Papaver somniferum HOM05D003797 ORTHO05D004370 1.8e-45 186.4 134 67.9
Zm00001eb312010 Zea mays HOM05D003797 ORTHO05D004370 5.2e-45 184.9 133 67.7
Nn3g18417 Nelumbo nucifera HOM05D003797 ORTHO05D004370 6.8e-45 184.5 134 65.7
Haze_10850 Corylus avellana HOM05D003797 ORTHO05D004370 8.9e-45 184.1 137 67.9
Thecc.02G307900 Theobroma cacao HOM05D003797 ORTHO05D004370 8.9e-45 184.1 136 64.7
Mapoly0116s0023 Marchantia polymorpha HOM05D003797 ORTHO05D004370 1.5e-44 183.3 133 68.4
SHI04334 Sapria himalayana HOM05D003797 ORTHO05D004370 2.6e-44 182.6 147 63.3
BcaB05g24664 Brassica carinata HOM05D003797 ORTHO05D004370 4.4e-44 181.8 135 68.1
HPP92_023452 Vanilla planifolia HOM05D003797 ORTHO05D004370 4.4e-44 181.8 135 66.7
HPP92_023443 Vanilla planifolia HOM05D003797 ORTHO05D004370 5.8e-44 181.4 136 66.2
AagrBONN_evm.TU.Sc2ySwM_228.2367 Anthoceros agrestis HOM05D003797 ORTHO05D004370 7.5e-44 181.0 134 68.7
COL.COLO4_27614 Corchorus olitorius HOM05D003797 ORTHO05D004370 9.8e-44 180.6 136 64.0
CDE05G1112 Ceratophyllum demersum HOM05D003797 ORTHO05D004370 1.7e-43 179.9 139 64.0
Pp3c2_34540 Physcomitrium patens HOM05D003797 ORTHO05D004370 2.9e-43 179.1 133 67.7
CDE05G1216 Ceratophyllum demersum HOM05D003797 ORTHO05D004370 1.4e-42 176.8 139 62.6
SMO169G0175 Selaginella moellendorffii HOM05D003797 ORTHO05D004370 4.6e-41 171.8 144 59.7
ClCG01G006640 Citrullus lanatus HOM05D003797 ORTHO05D004370 1.7e-40 169.9 133 64.7
Hma1.2p1_1538F.1_g289560 Hydrangea macrophylla HOM05D003797 ORTHO05D004370 1.1e-39 167.2 142 57.0
Hma1.2p1_0940F.1_g239510 Hydrangea macrophylla HOM05D003797 ORTHO05D004370 1.9e-39 166.4 135 59.3
GSVIVG01011629001 Vitis vinifera HOM05D003797 ORTHO05D004370 4.7e-38 161.8 106 74.5
Sed0010431 Sechium edule HOM05D003797 ORTHO05D004370 8.9e-37 157.5 132 63.6
Phvul.002G322800 Phaseolus vulgaris HOM05D003797 ORTHO05D004370 1.7e-35 153.3 135 60.7
EL10Ac8g20121 Beta vulgaris HOM05D003797 ORTHO05D004370 4.6e-33 145.2 88 79.5
Atru.chr11.846 Acer truncatum HOM05D003797 ORTHO05D004370 1.1e-31 140.6 88 78.4
VMungo0251G2644 Vigna mungo HOM05D003797 ORTHO05D004370 9.5e-31 137.5 100 69.0
Zm00001eb099160 Zea mays HOM05D003797 ORTHO05D004370 4.7e-30 135.2 97 69.1
SEGI_29045 Sequoiadendron giganteum HOM05D003797 ORTHO05D004370 1.5e-28 130.2 100 60.0
Nn4g24451 Nelumbo nucifera HOM05D003797 ORTHO05D004370 1.7e-16 90.1 70 62.9
Hund23441 Selenicereus undatus HOM05D003797 ORTHO05D004370 1.2e-12 77.4 58 67.2
Phvul.002G323700 Phaseolus vulgaris HOM05D003797 ORTHO05D004370 5.8e-12 75.1 38 84.2
VMungo0251G0608 Vigna mungo HOM05D003797 ORTHO05D004370 1.7e-11 73.6 39 82.1
Thecc.06G045600 Theobroma cacao HOM05D003797 ORTHO05D004370 1.2e-09 67.4 53 56.6
Eucgr.E00219 Eucalyptus grandis HOM05D008009 ORTHO05D010177 1.6e-06 57.0 166 26.5


User provided reference genes

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